Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5064 444 1e-122 seq16633 426 3e-117 seq20106 313 5e-83 >seq5064 Length=18333 Score = 444 bits (492), Expect = 1e-122 Identities = 284/309 (92%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||| ||||||||||||||| | |||||| || | || |||||||||| Sbjct 16509 GAACGAGACCTTGACCTGCTAAATAGCCCAATTCACTTTGGTGGATTGCTGGCTTCTTAG 16568 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 ||||||| | |||||||||| |||||||| ||||||| ||||||||||||||||||||| Sbjct 16569 AGGGACTTTTGGCTCAAGCCAATGGAAGTACGAGGCAAAAACAGGTCTGTGATGCCCTTA 16628 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 16629 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTACATCACCTTGGCCG 16688 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16689 AAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 16748 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct 16749 CTCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 16808 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 16809 CCCTTTGTA 16817 >seq16633 Length=356 Score = 426 bits (472), Expect = 3e-117 Identities = 279/306 (91%), Gaps = 1/306 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| |||| |||||| |||||| |||||||||| Sbjct 306 GAACGAGACCTTAACCTGCTAAATAGCCCGGCCGACTTTGGTTGGTCGCTGGCTTCTTAG 247 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||| || | ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 246 AGGGACTATCAGCGTTTAGCTGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 187 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| || ||| |||||| |||||||| ||| Sbjct 186 AGATGTTCTGGGCCGCACGCGCGCTACACTGACCGAACCAGCGAGTTTATCACCTTAGCC 127 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 |||||| ||||||||||||| |||||| |||||| |||||||||||||||||||||||| Sbjct 126 GGAAGGCTTGGGTAATCTTGTGAAACTCGGTCGTGATGGGGATAGAGCATTGCAATTATT 67 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||||||| Sbjct 66 GCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCATCAGCTCGCGTTGAATACGTCCCT 7 Query 319 GCCCTT 324 |||||| Sbjct 6 GCCCTT 1 >seq20106 Length=960890 Score = 313 bits (346), Expect = 5e-83 Identities = 261/313 (83%), Gaps = 6/313 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCC-GCTTTGGCGG-GTCGCCGGCTTCTT 77 || |||||||| | |||||||| |||| | || | | | | || ||| ||||||| Sbjct 103599 GAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTCCGTGGCCAGCTTCTT 103658 Query 78 AGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 135 ||||||||||| | ||| | ||| | ||||||||||||||||||||||||||||||||| Sbjct 103659 AGAGGGACTATGGCCGCTTAGGCCAA-GGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 103717 Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195 ||||||||||||||||||||||||||||||||||| | |||||||| || ||||| Sbjct 103718 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTATAGCCTTG 103777 Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 |||| ||| | |||||||||| | ||| | ||||| |||||||||| |||||||||| Sbjct 103778 GCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCAATT 103836 Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 ||| ||||||||||||||| ||||||||||||| ||||||||| |||||||| |||||| Sbjct 103837 GTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTC 103896 Query 316 CCTGCCCTTTGTA 328 ||||||||||||| Sbjct 103897 CCTGCCCTTTGTA 103909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946957516800