Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq5064 832 0.0 seq19594 358 2e-96 seq25281 356 7e-96 seq21512 356 7e-96 seq20668 347 4e-93 seq20106 304 4e-80 seq18770 251 2e-64 seq18971 203 1e-49 seq3592 127 6e-27 >seq5064 Length=18333 Score = 832 bits (922), Expect = 0.0 Identities = 489/504 (97%), Gaps = 4/504 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 15703 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAG-ATTTATTGTCACTACCT 15645 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15644 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 15585 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct 15584 TCTCAGGCTCCCTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGAGACCATGGTA 15525 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 15524 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCG 15465 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 15464 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAAGAGCCCCGAAGGGCATTGGT 15405 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 15404 TTTTTATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 15345 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 15344 AATTACCACGGTTATCCAGGTA--AAGGTACTATCAAATAAACGATAACTGATTTAATGA 15287 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| Sbjct 15286 GCCATTCGCAGTTTCACAGTAT-GATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 15228 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 15227 AGACAAGCATATGACTACTGGCAG 15204 >seq19594 Length=977857 Score = 358 bits (396), Expect = 2e-96 Identities = 349/445 (78%), Gaps = 11/445 (2%) Strand=Plus/Minus Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 ||| |||| |||||||||||||| |||||| |||||||| || |||||| || ||||| Sbjct 969624 CCCATGTCAGGATTGGGTAATTTACGCGCCAGCTGCCTTTTTTAAATGTGGAAGTCGTTT 969565 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||| ||||| | || |||| |||| |||||| || || ||| ||| ||||||| Sbjct 969564 TTCAAGCTCCTTTTCAAGAATTAAACCTTAATTCTTTGTCACTCGTCACTACTATGGTAG 969505 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 ||| |||||||||||||||||||||||| ||||||||||||||| | | |||| || | Sbjct 969504 GCCTCTATCCTACCATCGAAAGTTGATATGGCAGAAATTTGAATAATGCGTCGCTAGCAC 969445 Query 242 -AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||| ||| || | | |||||| |||||||| || |||| | | || | Sbjct 969444 GGTGGCCTTGCAATCCATCGAGTTATCATGAATCATCA--GAGCTC------GTGTCGAC 969393 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||| || || | ||||||||| ||| ||| ||||||||||||| Sbjct 969392 CTTTTATCTAATAAATGCATCCTTCTAGAAGTCGGGATTTGGTGCACGTATTAGCTCTAG 969333 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||| |||||||| |||| || || |||||| |||| |||||||||||||||| Sbjct 969332 AATTACTACGGTTATTTGAGTAGCAA-ATATCATCAAACAAACTATAACTGATTTAATGA 969274 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATGCATGGCTTAATCTTT 479 || ||||||| |||||| || | ||| || ||||||| ||||||||||||||||||| Sbjct 969273 GCTATTCGCAATTTCACAGTCTGAATTTTTTCATACTTACACATGCATGGCTTAATCTTC 969214 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 969213 GAGACAAGCATATGACTACTGGCAG 969189 >seq25281 Length=2126676 Score = 356 bits (394), Expect = 7e-96 Identities = 313/381 (82%), Gaps = 13/381 (3%) Strand=Plus/Plus Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 |||||| |||||||||||||||| |||| |||||| ||||||||||||| ||||||| Sbjct 2115121 TCTCCGAAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCTCTATCCT 2115180 Query 193 ACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC-TCAAGGCCATGC 251 |||||||||||||||| |||||||||||||||||| | | || ||| | |||| ||| Sbjct 2115181 ACCATCGAAAGTTGAT-GGGCAGAAATTTGAATGATGCGTTGCTGGCATAGTGGCCTTGC 2115239 Query 252 GATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG----AAG--GGCGTTGGTTTTTT 305 ||| || |||||| |||||||| || |||| || ||| |||| | |||| Sbjct 2115240 GATAGGTCGAGTTATCATGAATCATCA--GAGCAACGGGTAAAGCCCGCGTCGACCTTTT 2115297 Query 306 ATCTAATAAATACACCCCTTC-CGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATT 364 ||||||||||| || |||||| ||||| ||||||| ||| ||||||||||||||||| Sbjct 2115298 ATCTAATAAATGCATCCCTTCTAGAAGTTGGGGTTTGGTGCACGTATTAGCTCTAGAATT 2115357 Query 365 ACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424 || |||||||| || ||||| || ||| || |||||||| |||||||||||||||||||| Sbjct 2115358 ACTACGGTTATGCAAGTAGT-AGATACCATTAAATAAACTATAACTGATTTAATGAGCCA 2115416 Query 425 TTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTTTGAGA 483 ||||||||||||| || | ||| | | ||||||| || |||||| |||||||||||||| Sbjct 2115417 TTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACCTGCATGACTTAATCTTTGAGA 2115476 Query 484 CAAGCATATGACTACTGGCAG 504 ||||||||| ||||||||||| Sbjct 2115477 CAAGCATATAACTACTGGCAG 2115497 >seq21512 Length=11067 Score = 356 bits (394), Expect = 7e-96 Identities = 313/381 (82%), Gaps = 13/381 (3%) Strand=Plus/Minus Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 |||||| |||||||||||||||| |||| |||||| ||||||||||||| ||||||| Sbjct 3976 TCTCCGAAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCTCTATCCT 3917 Query 193 ACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC-TCAAGGCCATGC 251 |||||||||||||||| |||||||||||||||||| | | || ||| | |||| ||| Sbjct 3916 ACCATCGAAAGTTGAT-GGGCAGAAATTTGAATGATGCGTTGCTGGCATAGTGGCCTTGC 3858 Query 252 GATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG----AAG--GGCGTTGGTTTTTT 305 ||| || |||||| |||||||| || |||| || ||| |||| | |||| Sbjct 3857 GATAGGTCGAGTTATCATGAATCATCA--GAGCAACGGGTAAAGCCCGCGTCGACCTTTT 3800 Query 306 ATCTAATAAATACACCCCTTC-CGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATT 364 ||||||||||| || |||||| ||||| ||||||| ||| ||||||||||||||||| Sbjct 3799 ATCTAATAAATGCATCCCTTCTAGAAGTTGGGGTTTGGTGCACGTATTAGCTCTAGAATT 3740 Query 365 ACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCA 424 || |||||||| || ||||| || ||| || |||||||| |||||||||||||||||||| Sbjct 3739 ACTACGGTTATGCAAGTAGT-AGATACCATTAAATAAACTATAACTGATTTAATGAGCCA 3681 Query 425 TTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTTTGAGA 483 ||||||||||||| || | ||| | | ||||||| || |||||| |||||||||||||| Sbjct 3680 TTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACCTGCATGACTTAATCTTTGAGA 3621 Query 484 CAAGCATATGACTACTGGCAG 504 ||||||||| ||||||||||| Sbjct 3620 CAAGCATATAACTACTGGCAG 3600 >seq20668 Length=1057222 Score = 347 bits (384), Expect = 4e-93 Identities = 348/446 (78%), Gaps = 12/446 (3%) Strand=Plus/Minus Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||||||| |||||||||||||| | |||| ||||||||| || ||||||||| | ||| Sbjct 11337 CCCGTGTCAGGATTGGGTAATTTACACGCCAGCTGCCTTCTTTAAATGTGGTAGTCATTT 11278 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||| ||||| | ||| |||| |||| |||||| ||| || | | | ||||||| Sbjct 11277 TTCAAGCTCCTTTTCCCGAATTAAACCTTAATTCTTCGTCACTCCTCACTCTTATGGTAG 11218 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 ||| ||||||||||| ||||| |||||| ||||||||||||||||| | |||| ||| | Sbjct 11217 GCCTCTATCCTACCAGCGAAATTTGATATGGCAGAAATTTGAATGATGCGTCGCTGGCAC 11158 Query 242 -AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||| |||||| ||| |||||| |||||||| || |||| | |||| | Sbjct 11157 GGTGGCCTTGCGATCCGTCGAGTTATCATGAATCATCA--GAGCTC------GCGTCGAC 11106 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||| ||||| || ||||||| |||| ||| ||| ||| |||||||||||| Sbjct 11105 CTTTTATCTACTAAATGCATCCCTTCCAAAAGTTGGGATTTGGTGCACGTATTAGCTCTA 11046 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||| | |||||| |||| || || |||||| |||| ||||| |||||||| Sbjct 11045 GAATTACTATGGTTATTTGAGTAGCAA-ATATCATCAAACAAACTATAACATATTTAATG 10987 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATGCATGGCTTAATCTT 478 ||| ||| | |||||||| || | ||| || ||||||| |||||||||| |||||||| Sbjct 10986 AGCTATTTGTAGTTTCACAGTCTGAATTTTTTCATACTTACACATGCATGGTTTAATCTT 10927 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 10926 CGAGACAAGCATATGACTACTGGCAG 10901 >seq20106 Length=960890 Score = 304 bits (336), Expect = 4e-80 Identities = 194/210 (92%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| || | |||||| |||| |||||||||||||||||| Sbjct 102793 GTACTCATTCCAATTACCAGACTCATA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 102735 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 102734 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 102675 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| Sbjct 102674 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTA 102615 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAG 210 |||| ||||||||||||||||||||||||| Sbjct 102614 GGCCTCTATCCTACCATCGAAAGTTGATAG 102585 Score = 134 bits (148), Expect = 4e-29 Identities = 90/99 (91%), Gaps = 1/99 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| || | |||||| |||| |||||||||||||||||| Sbjct 104211 GTACTCATTCCAATTACCAGACTCATA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 104153 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCT 99 ||||||||| ||||||||||||||||||||||||||||| Sbjct 104152 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCT 104114 >seq18770 Length=1914 Score = 251 bits (278), Expect = 2e-64 Identities = 221/269 (82%), Gaps = 11/269 (4%) Strand=Plus/Plus Query 244 GGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGA----AGG--GCGTT 297 |||| |||||| ||| |||||| |||||||| | ||| | ||| || |||| Sbjct 538 GGCCGTGCGATCCGTCGAGTTATCATGAATCATC--GGATCAGCGAGCAGAGCCCGCGTC 595 Query 298 GGTTTTTTATCTAATAAATACACCCCTTCCG-AAGTCGGGGTTTTTAGCATGTATTAGCT 356 | ||||||||||||||| | ||||| ||| |||||||||||| | ||| ||||||||| Sbjct 596 AGCCTTTTATCTAATAAATGCGCCCCTCCCGGAAGTCGGGGTTTGTTGCACGTATTAGCT 655 Query 357 CTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTA 416 |||||||||| |||||||||| |||| | | ||| |||||| |||| |||||||||||| Sbjct 656 CTAGAATTACTACGGTTATCCGAGTAGCA-GATACCATCAAACAAACTATAACTGATTTA 714 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATGCATGGCTTAAT 475 ||||||||||||||||||||| || ||| || |||||| |||||||||||||||| Sbjct 715 ATGAGCCATTCGCAGTTTCACAGTTCGAATTAGTTCATACTTGCACATGCATGGCTTAAT 774 Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||| Sbjct 775 CTTTGAGACAAGCATATGACTACTGGCAG 803 Score = 248 bits (274), Expect = 3e-63 Identities = 155/167 (93%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | || | |||| |||| |||||||||||||||||| Sbjct 360 GTACTCATTCCAATTACCAGACACTAACGCGCCCGGTATTGTTATTTATTGTCACTACCT 419 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 479 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGT 167 ||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct 480 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGT 526 >seq18971 Length=1335 Score = 203 bits (224), Expect = 1e-49 Identities = 152/176 (86%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 330 AGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT 389 ||| ||||||| ||||||||||||||||||||||| |||||||||| |||||| | | Sbjct 927 AGTTGGGGTTTGGTGCATGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGTA-GAT 869 Query 390 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC 449 || ||| || ||| |||||||||| |||||||||||||||||||||| || | ||| Sbjct 868 ACCATCGAACAAATTATAACTGATTGAATGAGCCATTCGCAGTTTCACAGTCTGAATTAG 809 Query 450 TT-ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 808 TTCATACTTACACATGCATGACTTAATCTTTGAGACAAGCATATGACTACTGGCAG 753 Score = 132 bits (146), Expect = 1e-28 Identities = 85/93 (91%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 ||||||||||||||||||||||| |||| |||||| ||||||||||||| ||||||| Sbjct 1127 TCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCTCTATCCT 1068 Query 193 ACCATCGAAAGTTGATAGGGCAGAAATTTGAAT 225 |||||||||||||||||||||| |||||||||| Sbjct 1067 ACCATCGAAAGTTGATAGGGCAAAAATTTGAAT 1035 >seq3592 Length=5743183 Score = 127 bits (140), Expect = 6e-27 Identities = 86/95 (91%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATG 464 |||||||||||||||||||||||||||||||| || | ||| || ||||||| ||||| Sbjct 4807472 TAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATG 4807413 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACT 499 |||| |||||||||||||||||||||||||||||| Sbjct 4807412 CATGACTTAATCTTTGAGACAAGCATATGACTACT 4807378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510013337600