Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq20901 156 3e-33 seq18882 109 4e-19 >seq20901 Length=225483 Score = 156 bits (172), Expect = 3e-33 Identities = 385/577 (67%), Gaps = 9/577 (2%) Strand=Plus/Minus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 |||| || ||| |||| ||| || ||| |||||||| || || |||||||| || | Sbjct 71187 TGTTTCCAATCCAGTACCCGGAAATCTGGGAAATGTACAAGAAAGCCGAAGCTTCATTTT 71128 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCG 61183 |||||| |||||||||||| |||| | ||||| | ||||| || | || Sbjct 71127 GGACGGCGGAGGAGGTCGACCTGTCGCAGGACATCCGCCAGTGGGAATCCCTAACCGCCG 71068 Query 61184 GTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCA 61243 || |||| ||||| | || ||| | || ||||| ||||| ||||| || |||||| Sbjct 71067 ACGAGAAACACTTCATCACTCACGTGCTCGCCTTCTTCGCCGCCTCGGATGGAATCGTCC 71008 Query 61244 ATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCT 61303 || || | | | ||| | | || || ||||| || ||||||||| |||| Sbjct 71007 TCGAAAACCTCGCTGCCAGGTTCATGAAAGAAGTCCAAGTCTCCGAGGCGCGTGCCTTCT 70948 Query 61304 ACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATA 61363 |||||||||| || ||||| ||||| ||||||| || |||||| | || | || | Sbjct 70947 ACGGCTTCCAAATCGCCATCGAGAACATCCACTCCGAAATGTACTCGCTCCTTCTAGAAA 70888 Query 61364 CGTACATCAGGGA-GCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCG 61422 ||||||| | | | | | || || | | || || || ||| | || ||| | ||| Sbjct 70887 CGTACATAAAGAACTCCGACGAAAAGAG-CCGCTTATTTCGCGCCTTTGAAACGGTGCCG 70829 Query 61423 -GCGGTGAAGCGGAAA-GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACAT 61480 ||| || | |||| || ||||||||| | ||||||||| | | ||| |||| Sbjct 70828 TGCGTTG--CCAGAAAGGCCGATTGGGCCCTAAATTGGATCGACGG---CTCGGAGACAT 70774 Query 61481 TTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTG 61540 | | || || || | || ||||| || || || |||||||| || || Sbjct 70773 TCGCGGAGAGACTGATAGCGTTTGCTTGCGTGGAAGGGATATTTTTCTCGGGCAGTTTCT 70714 Query 61541 CCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGT 61600 ||| || |||||||| || || || || | ||||| || || |||||| || ||| Sbjct 70713 GCGCGATATTTTGGTTAAAAAAGCGCGGGTTAATGCCGGGGCTAACCTTCTCAAACGAGC 70654 Query 61601 TGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 | || || || ||||| || | || || ||||| || Sbjct 70653 TAATCTCGCGAGACGAAGGACTCCACTGCGATTTCGC 70617 >seq18882 Length=869960 Score = 109 bits (120), Expect = 4e-19 Identities = 386/589 (66%), Gaps = 18/589 (3%) Strand=Plus/Minus Query 61056 TTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGC 61115 ||| |||| |||||| || |||| | |||||| |||||||| || || ||||| Sbjct 814803 TTTTGTAT-GTTCCCGATTCAGTACCCACAAATTTGGGAAATGTACAAGAAAGCCGAAGC 814745 Query 61116 TTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTT 61175 || || ||||| | ||||| || ||| | || |||| | |||||||| | Sbjct 814744 GTCGTTTTGGACCGCTGAGGAAGTTGATCTTTCGCAAGATCTCCGCCACTGGGAGGCCCT 814685 Query 61176 ATCGAGCGGTGA--ACAA-CATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGA 61232 | | || ||| | || || ||| | | || ||| | || ||||| ||||| || || Sbjct 814684 AAC---CGCTGACGAGAAGCACTTCGTCACGCACGTGCTCGCCTTCTTCGCCGCCTCCGA 814628 Query 61233 CGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGC 61292 ||| |||||| ||||| | | | ||| | |||||| || || | ||||| Sbjct 814627 CGGCATCGTCCTCGAGAACCTCGCCGGCAGGTTCATGACGGAGGTCCAGGTCGCCGAGGC 814568 Query 61293 GCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGT 61352 |||| |||||||||||||| || ||||| ||||| ||||||| || |||||| | Sbjct 814567 GCGTGCCTTCTACGGCTTCCAAATCGCCATTGAGAACATCCACTCCGAAATGTACTCGCT 814508 Query 61353 TCTCATCGATACGTACATCAGGGA-GCGGGCGGAACGTGAACGATTGTTCAATGCCATCG 61411 || | || || ||||||| | | | || || | | || | || | ||||||| Sbjct 814507 GCTTCTAGAAACTTACATCAAAAACTCCGACGAAAAG-AATCGTCTCTTTCACGCCATCG 814449 Query 61412 AGAC-GATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACA 61470 | || | | || ||| | | |||||| ||||| || ||||||||| | | Sbjct 814448 AAACGGTTCCCTGCGTCGCA-AAGAAAGCCACGTGGGCGTTAAATTGGATCGACGG---C 814393 Query 61471 ACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGG--TGTATTTTTCA 61528 ||| || || | || |||| | || ||||| || ||||| | | || ||| Sbjct 814392 TCGGAGACTTTCGCCGAGAGATTAATCGCGTTTGCTTGCGTGGAGGGGATTTTCTTCTCA 814333 Query 61529 GTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCT 61588 | ||| |||| ||| || |||||| | || || || || | ||||| || | || | Sbjct 814332 G-GGAGTTTTTG-CGCGATATTTTGGCTCAAAAAGCGAGGGTTAATGCCGGGATTAACAT 814275 Query 61589 TCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 || || |||||||| || || || ||||| | || || |||||||| Sbjct 814274 TCTCAAACGAGTTGATCTCGCGAGATGAGGGTCTCCACTGCGATTTTGC 814226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397443958784000