Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16] 126,142 sequences; 261,457,759 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq126054 93.3 4e-17 seq125583 86.0 7e-15 >seq126054 Length=4379 Score = 93.3 bits (102), Expect = 4e-17 Identities = 123/167 (74%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAA 82 ||||| |||||| || | ||| || |||| ||| || ||| || | | | ||| Sbjct 2225 CAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAA-CTCTCTCTAA 2167 Query 83 GGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAG 142 |||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| || | Sbjct 2166 GGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--GGGG 2109 Query 143 GGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 2108 GTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 2062 >seq125583 Length=1492 Score = 86.0 bits (94), Expect = 7e-15 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| |||||||||| ||| || | ||| Sbjct 1322 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 1263 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| |||||| |||||||||||| || |||| Sbjct 1262 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 1223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530550873268