Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16] 126,142 sequences; 261,457,759 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq120065 80.6 3e-13 seq110680 80.6 3e-13 seq103845 80.6 3e-13 seq94462 80.6 3e-13 seq94390 80.6 3e-13 seq94380 75.2 1e-11 >seq120065 Length=417 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 145 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 87 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 86 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 49 >seq110680 Length=588 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 243 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 185 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 184 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 147 >seq103845 Length=957 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 187 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 245 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 246 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 283 >seq94462 Length=1518 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 796 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 854 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 855 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 892 >seq94390 Length=6339 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 6289 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 6231 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 6230 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 6193 >seq94380 Length=2920 Score = 75.2 bits (82), Expect = 1e-11 Identities = 72/90 (80%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 2832 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 2890 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAA 101 || |||||||| ||||||||||| |||| Sbjct 2891 GGCTTGCTTTGAGCACTCTAATTTCTTCAA 2920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594472665228