Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16]
126,142 sequences; 261,457,759 total letters
Query= AAMG01001851.1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
seq126054 87.8 1e-15
seq112139 87.8 1e-15
>seq126054
Length=4379
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 1412 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 1471
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 1472 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 1529
>seq112139
Length=683
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 10 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 69
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 70 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351583731400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |