Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16]
126,142 sequences; 261,457,759 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq126055 329 1e-87
seq125562 266 1e-68
seq6532 266 1e-68
seq11908 228 2e-57
seq61060 156 1e-35
seq124151 132 1e-28
seq11929 120 9e-25
seq67386 109 2e-21
seq58177 105 2e-20
seq78974 93.3 1e-16
>seq126055
Length=3997
Score = 329 bits (364), Expect = 1e-87
Identities = 280/343 (82%), Gaps = 3/343 (1%)
Strand=Plus/Minus
Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219
|||||||||||||||||||||| ||| || |||||||||||||| |||||||||| |
Sbjct 3171 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 3112
Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279
| |||||| ||||| |||||| ||| |||||||||||| ||| |||||||||||||||||
Sbjct 3111 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 3052
Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339
||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | ||
Sbjct 3051 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 2992
Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397
||||| |||||||| || ||| | | | ||||| |||||||||| || |||
Sbjct 2991 AGGCCCACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAAT 2932
Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457
|||| ||||||||| |||||||||||||||||||||| ||| || |||||||||||
Sbjct 2931 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCG 2872
Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
|||| | | |||||||||| || |||||||| || |||||||
Sbjct 2871 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTC 2830
>seq125562
Length=1343
Score = 266 bits (294), Expect = 1e-68
Identities = 257/327 (79%), Gaps = 5/327 (2%)
Strand=Plus/Minus
Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227
||||| |||||||| |||||| |||| |||||| | | ||| |||| | || ||
Sbjct 993 ATTAGGTAGTTGGTCAGGTAAAGGCTGACCAAGCCAATGATGCTTAGCTGGTCTTTTCGG 934
Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287
||||| |||||| ||| |||||||||||| || ||||| ||||| |||||||||||||
Sbjct 933 ATGATCAGCCACACTGGGACTGAGACACGGCCCGGACTCCCACGGGGGGCAGCAGTGGGG 874
Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC--T 345
||| ||| ||||||||| |||||| ||| |||||| ||||||| || ||||| | |
Sbjct 873 AATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATTGCGTGAGTGAAGAAGGGCAAT 814
Query 346 TCGGGTCGTAAAGCTCTGTCCTCAA--GGAAGATAATGACGGTACTTGAGGAGGAAGCCC 403
| | | |||||||||| || || | | ||| ||||| | ||| ||||| |||||||
Sbjct 813 GCCGCTTGTAAAGCTCTTTCGTCGAGTGCGCGATCATGACAGGACTCGAGGAAGAAGCCC 754
Query 404 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 463
||||||||| |||||||||||||||||||| ||| |||||| || ||| | |||||| |
Sbjct 753 CGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTGTTCTTCGGAATGA 694
Query 464 CTGGGGCGTAAAGGGTGCGTAGGTGGT 490
|| |||||||||||| |||||| |||
Sbjct 693 CT-GGGCGTAAAGGGCACGTAGGCGGT 668
>seq6532
Length=3813
Score = 266 bits (294), Expect = 1e-68
Identities = 257/327 (79%), Gaps = 5/327 (2%)
Strand=Plus/Minus
Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227
||||| |||||||| |||||| |||| |||||| | | ||| |||| | || ||
Sbjct 1794 ATTAGGTAGTTGGTCAGGTAAAGGCTGACCAAGCCAATGATGCTTAGCTGGTCTTTTCGG 1735
Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287
||||| |||||| ||| |||||||||||| || ||||| ||||| |||||||||||||
Sbjct 1734 ATGATCAGCCACACTGGGACTGAGACACGGCCCGGACTCCCACGGGGGGCAGCAGTGGGG 1675
Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC--T 345
||| ||| ||||||||| |||||| ||| |||||| ||||||| || ||||| | |
Sbjct 1674 AATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATTGCGTGAGTGAAGAAGGGCAAT 1615
Query 346 TCGGGTCGTAAAGCTCTGTCCTCAA--GGAAGATAATGACGGTACTTGAGGAGGAAGCCC 403
| | | |||||||||| || || | | ||| ||||| | ||| ||||| |||||||
Sbjct 1614 GCCGCTTGTAAAGCTCTTTCGTCGAGTGCGCGATCATGACAGGACTCGAGGAAGAAGCCC 1555
Query 404 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 463
||||||||| |||||||||||||||||||| ||| |||||| || ||| | |||||| |
Sbjct 1554 CGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTGTTCTTCGGAATGA 1495
Query 464 CTGGGGCGTAAAGGGTGCGTAGGTGGT 490
|| |||||||||||| |||||| |||
Sbjct 1494 CT-GGGCGTAAAGGGCACGTAGGCGGT 1469
>seq11908
Length=925
Score = 228 bits (252), Expect = 2e-57
Identities = 194/238 (82%), Gaps = 2/238 (1%)
Strand=Plus/Plus
Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219
|||||||||||||||||||||| ||| || |||||||||||||| |||||||||| |
Sbjct 684 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 743
Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279
| |||||| ||||| |||||| ||| |||||||||||| ||| |||||||||||||||||
Sbjct 744 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 803
Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339
||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | ||
Sbjct 804 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 863
Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGA 395
||||| |||||||| || ||| | | | ||||| |||||||||| || |||
Sbjct 864 AGGCCCACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGA 921
>seq61060
Length=4190
Score = 156 bits (172), Expect = 1e-35
Identities = 201/274 (73%), Gaps = 4/274 (1%)
Strand=Plus/Plus
Query 166 TGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGA 225
|||||||||||||||| ||| || |||||| ||||||| ||||||||| | | |||
Sbjct 2287 TGATTAGCTAGTTGGTGAGGCAATAGCTTACTAAGGCGATGATCAGTAGTTGGTCCAAGA 2346
Query 226 GGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGG 285
|||| |||||||||| ||| ||||||| ||| ||||||| |||||| ||||||||
Sbjct 2347 AAATGATTAGCCACATTGGGACTAAGACACGACCCAGACTCCTATGGGAGGTAGCAGTGG 2406
Query 286 GGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCT 345
||||| || |||||| |||||||| | || || |||||||| | ||| |||
Sbjct 2407 GGAATTTTTGGCAATGGAAGGAAGCCTGAAGGAGTAATGCCGCGTGGAGGTAGAAAACCT 2466
Query 346 TCGGGTCGTAAAGCTCTGTCCTCAAG-GAAG--ATAATGACGGTACTTGAGGAGGAAGCC 402
||||||| || || | | || | |||| ||| ||||||| | | | |||
Sbjct 2467 ATGGGTCGTGAA-CTTTTTTTTCTGGAGAAGAAATAGTGACGGTGTCTAGGAAATAAGTA 2525
Query 403 CCGGCTAACTACGTGCCAGCAGCCGCGGTAATAC 436
||||||||| |||| ||||||| | |||||||
Sbjct 2526 TCGGCTAACTCTGTGCTAGCAGCCACAGTAATAC 2559
>seq124151
Length=1160
Score = 132 bits (146), Expect = 1e-28
Identities = 93/106 (88%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 226 GGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGG 285
|| ||||| |||||| ||| |||||||||||| ||| |||||||||||||||||||||||
Sbjct 118 GGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGG 59
Query 286 GGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTG 331
||||| || | |||||||| ||||||||| | ||||| ||||||||
Sbjct 58 GGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTG 13
>seq11929
Length=257
Score = 120 bits (132), Expect = 9e-25
Identities = 101/123 (82%), Gaps = 1/123 (1%)
Strand=Plus/Minus
Query 378 AATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 437
|||||||||| || ||| |||| ||||||||| ||||||||||||||||||||||
Sbjct 235 AATGACGGTATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACA 176
Query 438 TAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAA 497
||| || ||||||||||||||| | | |||||||||| || |||||||| || ||||
Sbjct 175 GAGGATGCAAGCGTTATCCGGAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAA 117
Query 498 GTC 500
|||
Sbjct 116 GTC 114
>seq67386
Length=7403
Score = 109 bits (120), Expect = 2e-21
Identities = 115/149 (77%), Gaps = 2/149 (1%)
Strand=Plus/Plus
Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGA 223
|||||||| |||||||||| || || | ||| ||| || | ||||||| | | ||
Sbjct 3322 TCTGATTAACTAGTTGGTATGGCAATAG-TTAT-AAGATGATGTTCAGTAGTTGGTCCGA 3379
Query 224 GAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGT 283
|||| ||||| || ||||| | ||| ||||| | |||||||||||||| || | |||
Sbjct 3380 GAGGATGATCAGCAACATTAGGACTAAGACATGACCCAAACTCCTACGGAAGATAATAGT 3439
Query 284 GGGGAATATTGCACAATGGGCAAAAGCCT 312
||||||| || | ||||||||||||||||
Sbjct 3440 GGGGAATTTTCCGCAATGGGCAAAAGCCT 3468
>seq58177
Length=2192
Score = 105 bits (116), Expect = 2e-20
Identities = 86/103 (83%), Gaps = 1/103 (1%)
Strand=Plus/Minus
Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457
|||| ||||||||| |||||||||||||||||||||| ||| || |||||||||||
Sbjct 603 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCG 544
Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
|||| | | |||||||||| || |||||||| || |||||||
Sbjct 543 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTC 502
>seq78974
Length=7354
Score = 93.3 bits (102), Expect = 1e-16
Identities = 227/342 (66%), Gaps = 3/342 (1%)
Strand=Plus/Plus
Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219
|| || ||||||||||||| || ||| || | |||||||| | ||||||||| |
Sbjct 6722 CGTGTTTGATTAGCTAGTTAGTGAGGCAATAGTTTACCAAGAAAATTATCAGTAGCTGGT 6781
Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279
||| || ||||| ||||| | || |||||||| | | |||||| ||| ||| ||
Sbjct 6782 TCGAGGGGATGATCAACCACACTAAAATTGAGACACAGCCTAAACTCTTACAAGAGATAG 6841
Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339
| |||||||| || |||| || |||| |||| ||||| || | || | | ||
Sbjct 6842 TAATGGGGAATTTTTTGCAATATGCGAAAGTCTGACAGAGCAATGCTGTGTAAAAGTAGA 6901
Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397
|||| | ||| || || ||| | ||| | ||| | ||||| || ||||| |
Sbjct 6902 AGGCTTATAGGTTGTGAACTTCTTTTCTCGAAGAATAAGCAATGATAATATTTGAGAAAT 6961
Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457
||| |||||||| ||| | || |||||| | | || | |||||||
Sbjct 6962 AAGTATTGGCTAACTCTACACCAACGGCTTTAATAATACAAAAGATGCAATTGTTATCC- 7020
Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499
||| | | |||||||||| || |||||| || ||| ||
Sbjct 7021 GAAATGGTTGGGCGTAAAGTGTCTATAGGTGACTTTTTAGGT 7062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1495710897408
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