Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16] 126,142 sequences; 261,457,759 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq94390 673 0.0 seq110778 421 2e-115 seq115912 354 3e-95 seq99253 262 1e-67 seq101352 221 4e-55 seq74913 208 2e-51 seq116278 136 1e-29 seq104575 136 1e-29 seq34119 132 2e-28 seq94878 114 4e-23 seq74906 109 2e-21 seq125583 78.8 3e-12 >seq94390 Length=6339 Score = 673 bits (746), Expect = 0.0 Identities = 478/539 (89%), Gaps = 12/539 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 2157 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 2098 Query 67 GTTTAACAGATGT-GCCGCCCCAGCCAAAC-TCCCC-ACCTGACAATGTCATCAACCCGG 123 ||| |||||||| |||||||||||||||| ||||| ||||||||||||| || ||||| Sbjct 2097 TTTTGACAGATGTNGCCGCCCCAGCCAAACNTCCCCNACCTGACAATGTCTTCCGCCCGG 2038 Query 124 ATCGGCCCGCGAAGG----ACCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGC 178 ||||| |||| ||| |||| ||| ||| | || | ||| || ||||| Sbjct 2037 ATCGGACCGCCGAGGCGGGNCCTTGGGTCCAAAAAGAGGGGCAGTGCC--CCGCTTCCGA 1980 Query 179 TTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC-GGC 237 |||| || ||||||||| |||| ||| ||||||||||||||||| ||||| | ||| Sbjct 1979 TTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGTTTCCGGC 1920 Query 238 TCCCACTTATTCTACACCTCT-CAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1919 TCCCACTTATACTACACCTCTNCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 1860 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 1859 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 1800 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1799 ATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 1740 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1739 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 1680 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 1679 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTGAGCATC 1621 >seq110778 Length=905 Score = 421 bits (466), Expect = 2e-115 Identities = 321/366 (88%), Gaps = 12/366 (3%) Strand=Plus/Minus Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGG-TATTTCACTTGCGCCGAAA 233 |||||||| || ||||||||| |||| ||| ||||||| |||| ||||| ||||| Sbjct 841 CCGCTTCANGGAATAAGTAAAATAACGTTAAAAGTAGTGGNTATTNCACTTTCGCCGTTT 782 Query 234 C-GGC-TCCCACTTATT-CTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCA 289 | ||| |||||||| | ||||||||||||| |||||||||||||||||||||||||||| Sbjct 781 CCGGCNTCCCACTTNGTACTACACCTCTCAANGTCATTTCACAAAGTCGGACTAGAGTCA 722 Query 290 A-GCTCAACAGGGTCTTCTTTCCCC-GCTGATTCCGCCAAGCCC-GTTCCCTTGGCTGTG 346 | | ||||| |||||||||||||| | |||||| ||||||||| ||||||||| |||| Sbjct 721 ACNCNCAACANGGTCTTCTTTCCCCNGTTGATTCTGCCAAGCCCCNTTCCCTTGGTTGTG 662 Query 347 GTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCAC 406 ||||| || |||| |||| | ||||||||||||||| |||||||||||||||||| |||| Sbjct 661 GTTTCACTGGATAATAGACAAGGACAGTGGGAATCTTGTTAATCCATTCATGCGCATCAC 602 Query 407 TAATTAGATGACGA-GGCATTTGGCTACCTTAAG-AGAGTCATAGTTACTCCCGCCGTTT 464 |||||| ||||||| ||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 601 TAATTAAATGACGANGGCATTTGGCTACCTTAAGNAGAGTCATAGTTACTCTCGCCGTTT 542 Query 465 ACCCGCGCTTGGTTGAATTTCTT-CACTTT-GACATTCAGAGCACTGGGCAGAAATCACA 522 |||||||| | |||||||||||| |||||| |||||||| |||||||||||||||||||| Sbjct 541 ACCCGCGCCTTGTTGAATTTCTTNCACTTTNGACATTCAAAGCACTGGGCAGAAATCACA 482 Query 523 TTGCGT 528 |||||| Sbjct 481 TTGCGT 476 >seq115912 Length=969 Score = 354 bits (392), Expect = 3e-95 Identities = 326/407 (80%), Gaps = 19/407 (5%) Strand=Plus/Minus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 |||| || ||| ||||||| |||| || | ||| | |||||||||||||| |||| Sbjct 456 TTTTATTCCACACGAGATTTTTGTTTTCGTTAAGTTCACCTTAGGACACCTGTATTATCT 397 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 ||||||||||||||||||| || ||||||||||||||||||||||| || ||| |||| Sbjct 396 TTTAACAGATGTGCCGCCCTAGGCAAACTCCCCACCTGACAATGTCTTCCTCCCAAATCG 337 Query 128 GCCCGCGAAGG--ACCTTAACG-CCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTCAT 183 |||||| ||| | ||| | ||| ||| || ||| | || | ||||| |||| Sbjct 336 GCCCGCCGAGGTGAGCTTTGGGTCCAAAAAGAGG--GGTAGTGCCCCGCTTCCGATTCAC 279 Query 184 TG-ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC-GGCTCCC 241 | | ||||||||| |||| ||| ||||||||||||||||| ||||| | ||||||| Sbjct 278 AGNAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGTTTCCGGCTCCC 219 Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||| || Sbjct 218 ACTTATACTACACCTCTCAAGTCATTTCAGAAAGTCGGACTAGAGTTAAGCTCAACAAGG 159 Query 302 TCTTCTTTCCCCGCTGATTCCGC-----------CAAGCCCGTTCCCTTGGCTGTGGTTT 350 ||||||||| || ||||||| || ||| |||||||||||| ||||||||| Sbjct 158 TCTTCTTTCTCCTCTGATTCTGCAAAAACCTGTTCAAACCCGTTCCCTTGACTGTGGTTT 99 Query 351 CGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397 || | ||||||||| || |||||||||||||||||||||||||| || Sbjct 98 CGTTGGATAGTAGACAGTGACAGTGGGAATCTCGTTAATCCATTTAT 52 >seq99253 Length=3701 Score = 262 bits (290), Expect = 1e-67 Identities = 148/150 (99%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 386 TAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTC 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTC 60 Query 446 ATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC 120 Query 506 ACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||| | |||| Sbjct 121 ACTGGGCAGAAATCACATTGCGTGAGCATC 150 >seq101352 Length=897 Score = 221 bits (244), Expect = 4e-55 Identities = 127/130 (98%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 130 CGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 71 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 70 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 11 Query 354 TAGATAGTAG 363 | |||||||| Sbjct 10 TGGATAGTAG 1 >seq74913 Length=975 Score = 208 bits (230), Expect = 2e-51 Identities = 150/175 (86%), Gaps = 11/175 (6%) Strand=Plus/Minus Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 |||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||| Sbjct 968 CGGCTCCCACTTATACTACACCTCTCAAGTCATTTCAGAAAGTCGGACTAGAGTTAAGCT 909 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGC-----------CAAGCCCGTTCCCTTGGC 342 ||||| ||||||||||| || ||||||| || ||| |||||||||||| | Sbjct 908 CAACAAGGTCTTCTTTCTCCTCTGATTCTGCAAAAACCCGTTCAAACCCGTTCCCTTGAC 849 Query 343 TGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397 |||||||||| | ||||||||| || |||||||||||||||||||||||||| || Sbjct 848 TGTGGTTTCGTTGGATAGTAGACAGTGACAGTGGGAATCTCGTTAATCCATTTAT 794 >seq116278 Length=1109 Score = 136 bits (150), Expect = 1e-29 Identities = 84/90 (93%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAG 360 |||||||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||| Sbjct 164 GTCTTCTTTCCCTGCTGATTCTGCCAAGCCTGTTCCCTTGGCTGTGGTTTCGCTGGATAG 105 Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATC 390 |||| | ||||||||||||||||||||||| Sbjct 104 TAGACAAGGACAGTGGGAATCTCGTTAATC 75 Score = 109 bits (120), Expect = 2e-21 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 ||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| Sbjct 242 CAACAGGGTCTTCTTTCCCTGCTGATTTTGCCAAGCCTTTTCCCTTGGCTGTGGTTTCGC 183 Query 354 TAGATAGTAGATAGGGAC 371 | ||||||||| |||||| Sbjct 182 TGGATAGTAGACAGGGAC 165 Score = 91.5 bits (100), Expect = 5e-16 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 348 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407 |||| || ||||||||| | |||||||||||||||||||||||||||||| ||| ||||| Sbjct 74 TTTCACTGGATAGTAGACAAGGACAGTGGGAATCTCGTTAATCCATTCATACGCATCACT 15 Query 408 AATTA 412 ||||| Sbjct 14 AATTA 10 >seq104575 Length=1274 Score = 136 bits (150), Expect = 1e-29 Identities = 101/117 (86%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTC-TGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65 |||||| || ||| |||||||| ||||||| |||| | |||||||||||||| |||| Sbjct 904 CTTTTGTTCCACACGAGATTTCNTGTTCTCGTTGAGCTCATCTTAGGACACCTGCATTAT 963 Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCG 122 |||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 964 CTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCG 1020 >seq34119 Length=47608 Score = 132 bits (146), Expect = 2e-28 Identities = 95/108 (88%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 327 |||||||| ||||||||||||||||||||||| | |||||||||| |||||||| ||||| Sbjct 7588 TCACAAAGCCGGACTAGAGTCAAGCTCAACAGCG-CTTCTTTCCCTGCTGATTCTGCCAA 7530 Query 328 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTG 375 ||| |||| ||| || |||||||| || ||||||| | |||||||||| Sbjct 7529 GCCTGTTCACTTAGCCGTGGTTTCACTGGATAGTATAGAGGGACAGTG 7482 >seq94878 Length=5958 Score = 114 bits (126), Expect = 4e-23 Identities = 70/73 (96%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TTACCCGCGCTTGGTTGA-TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 59 Query 523 TTGCGTCAACATC 535 |||||| | |||| Sbjct 60 TTGCGTGAGCATC 72 >seq74906 Length=6202 Score = 109 bits (120), Expect = 2e-21 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 ||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| Sbjct 91 CAACAGGGTCTTCTTTCCCTGCTGATTTTGCCAAGCCTTTTCCCTTGGCTGTGGTTTCGC 32 Query 354 TAGATAGTAGATAGGGAC 371 | ||||||||| |||||| Sbjct 31 TGGATAGTAGACAGGGAC 14 >seq125583 Length=1492 Score = 78.8 bits (86), Expect = 3e-12 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| |||| Sbjct 959 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 1018 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||| || ||| | ||||||| |||||||||||| | |||| Sbjct 1019 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 1064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1633137326016