Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16]
126,142 sequences; 261,457,759 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq94390 673 0.0
seq110778 421 2e-115
seq115912 354 3e-95
seq99253 262 1e-67
seq101352 221 4e-55
seq74913 208 2e-51
seq116278 136 1e-29
seq104575 136 1e-29
seq34119 132 2e-28
seq94878 114 4e-23
seq74906 109 2e-21
seq125583 78.8 3e-12
>seq94390
Length=6339
Score = 673 bits (746), Expect = 0.0
Identities = 478/539 (89%), Gaps = 12/539 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 2157 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 2098
Query 67 GTTTAACAGATGT-GCCGCCCCAGCCAAAC-TCCCC-ACCTGACAATGTCATCAACCCGG 123
||| |||||||| |||||||||||||||| ||||| ||||||||||||| || |||||
Sbjct 2097 TTTTGACAGATGTNGCCGCCCCAGCCAAACNTCCCCNACCTGACAATGTCTTCCGCCCGG 2038
Query 124 ATCGGCCCGCGAAGG----ACCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGC 178
||||| |||| ||| |||| ||| ||| | || | ||| || |||||
Sbjct 2037 ATCGGACCGCCGAGGCGGGNCCTTGGGTCCAAAAAGAGGGGCAGTGCC--CCGCTTCCGA 1980
Query 179 TTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC-GGC 237
|||| || ||||||||| |||| ||| ||||||||||||||||| ||||| | |||
Sbjct 1979 TTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGTTTCCGGC 1920
Query 238 TCCCACTTATTCTACACCTCT-CAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1919 TCCCACTTATACTACACCTCTNCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 1860
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1859 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 1800
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1799 ATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 1740
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 1680
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1679 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTGAGCATC 1621
>seq110778
Length=905
Score = 421 bits (466), Expect = 2e-115
Identities = 321/366 (88%), Gaps = 12/366 (3%)
Strand=Plus/Minus
Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGG-TATTTCACTTGCGCCGAAA 233
|||||||| || ||||||||| |||| ||| ||||||| |||| ||||| |||||
Sbjct 841 CCGCTTCANGGAATAAGTAAAATAACGTTAAAAGTAGTGGNTATTNCACTTTCGCCGTTT 782
Query 234 C-GGC-TCCCACTTATT-CTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCA 289
| ||| |||||||| | ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 781 CCGGCNTCCCACTTNGTACTACACCTCTCAANGTCATTTCACAAAGTCGGACTAGAGTCA 722
Query 290 A-GCTCAACAGGGTCTTCTTTCCCC-GCTGATTCCGCCAAGCCC-GTTCCCTTGGCTGTG 346
| | ||||| |||||||||||||| | |||||| ||||||||| ||||||||| ||||
Sbjct 721 ACNCNCAACANGGTCTTCTTTCCCCNGTTGATTCTGCCAAGCCCCNTTCCCTTGGTTGTG 662
Query 347 GTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCAC 406
||||| || |||| |||| | ||||||||||||||| |||||||||||||||||| ||||
Sbjct 661 GTTTCACTGGATAATAGACAAGGACAGTGGGAATCTTGTTAATCCATTCATGCGCATCAC 602
Query 407 TAATTAGATGACGA-GGCATTTGGCTACCTTAAG-AGAGTCATAGTTACTCCCGCCGTTT 464
|||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 601 TAATTAAATGACGANGGCATTTGGCTACCTTAAGNAGAGTCATAGTTACTCTCGCCGTTT 542
Query 465 ACCCGCGCTTGGTTGAATTTCTT-CACTTT-GACATTCAGAGCACTGGGCAGAAATCACA 522
|||||||| | |||||||||||| |||||| |||||||| ||||||||||||||||||||
Sbjct 541 ACCCGCGCCTTGTTGAATTTCTTNCACTTTNGACATTCAAAGCACTGGGCAGAAATCACA 482
Query 523 TTGCGT 528
||||||
Sbjct 481 TTGCGT 476
>seq115912
Length=969
Score = 354 bits (392), Expect = 3e-95
Identities = 326/407 (80%), Gaps = 19/407 (5%)
Strand=Plus/Minus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|||| || ||| ||||||| |||| || | ||| | |||||||||||||| ||||
Sbjct 456 TTTTATTCCACACGAGATTTTTGTTTTCGTTAAGTTCACCTTAGGACACCTGTATTATCT 397
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
||||||||||||||||||| || ||||||||||||||||||||||| || ||| ||||
Sbjct 396 TTTAACAGATGTGCCGCCCTAGGCAAACTCCCCACCTGACAATGTCTTCCTCCCAAATCG 337
Query 128 GCCCGCGAAGG--ACCTTAACG-CCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTCAT 183
|||||| ||| | ||| | ||| ||| || ||| | || | ||||| ||||
Sbjct 336 GCCCGCCGAGGTGAGCTTTGGGTCCAAAAAGAGG--GGTAGTGCCCCGCTTCCGATTCAC 279
Query 184 TG-ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC-GGCTCCC 241
| | ||||||||| |||| ||| ||||||||||||||||| ||||| | |||||||
Sbjct 278 AGNAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGTTTCCGGCTCCC 219
Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301
|||||| |||||||||||||||||||||| |||||||||||||||| |||||||||| ||
Sbjct 218 ACTTATACTACACCTCTCAAGTCATTTCAGAAAGTCGGACTAGAGTTAAGCTCAACAAGG 159
Query 302 TCTTCTTTCCCCGCTGATTCCGC-----------CAAGCCCGTTCCCTTGGCTGTGGTTT 350
||||||||| || ||||||| || ||| |||||||||||| |||||||||
Sbjct 158 TCTTCTTTCTCCTCTGATTCTGCAAAAACCTGTTCAAACCCGTTCCCTTGACTGTGGTTT 99
Query 351 CGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397
|| | ||||||||| || |||||||||||||||||||||||||| ||
Sbjct 98 CGTTGGATAGTAGACAGTGACAGTGGGAATCTCGTTAATCCATTTAT 52
>seq99253
Length=3701
Score = 262 bits (290), Expect = 1e-67
Identities = 148/150 (99%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 386 TAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTC 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTC 60
Query 446 ATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 ATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC 120
Query 506 ACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||||||||||||| | ||||
Sbjct 121 ACTGGGCAGAAATCACATTGCGTGAGCATC 150
>seq101352
Length=897
Score = 221 bits (244), Expect = 4e-55
Identities = 127/130 (98%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130 CGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 71
Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 70 CAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 11
Query 354 TAGATAGTAG 363
| ||||||||
Sbjct 10 TGGATAGTAG 1
>seq74913
Length=975
Score = 208 bits (230), Expect = 2e-51
Identities = 150/175 (86%), Gaps = 11/175 (6%)
Strand=Plus/Minus
Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293
|||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||
Sbjct 968 CGGCTCCCACTTATACTACACCTCTCAAGTCATTTCAGAAAGTCGGACTAGAGTTAAGCT 909
Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGC-----------CAAGCCCGTTCCCTTGGC 342
||||| ||||||||||| || ||||||| || ||| |||||||||||| |
Sbjct 908 CAACAAGGTCTTCTTTCTCCTCTGATTCTGCAAAAACCCGTTCAAACCCGTTCCCTTGAC 849
Query 343 TGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397
|||||||||| | ||||||||| || |||||||||||||||||||||||||| ||
Sbjct 848 TGTGGTTTCGTTGGATAGTAGACAGTGACAGTGGGAATCTCGTTAATCCATTTAT 794
>seq116278
Length=1109
Score = 136 bits (150), Expect = 1e-29
Identities = 84/90 (93%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAG 360
|||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct 164 GTCTTCTTTCCCTGCTGATTCTGCCAAGCCTGTTCCCTTGGCTGTGGTTTCGCTGGATAG 105
Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATC 390
|||| | |||||||||||||||||||||||
Sbjct 104 TAGACAAGGACAGTGGGAATCTCGTTAATC 75
Score = 109 bits (120), Expect = 2e-21
Identities = 71/78 (91%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353
||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||
Sbjct 242 CAACAGGGTCTTCTTTCCCTGCTGATTTTGCCAAGCCTTTTCCCTTGGCTGTGGTTTCGC 183
Query 354 TAGATAGTAGATAGGGAC 371
| ||||||||| ||||||
Sbjct 182 TGGATAGTAGACAGGGAC 165
Score = 91.5 bits (100), Expect = 5e-16
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 348 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407
|||| || ||||||||| | |||||||||||||||||||||||||||||| ||| |||||
Sbjct 74 TTTCACTGGATAGTAGACAAGGACAGTGGGAATCTCGTTAATCCATTCATACGCATCACT 15
Query 408 AATTA 412
|||||
Sbjct 14 AATTA 10
>seq104575
Length=1274
Score = 136 bits (150), Expect = 1e-29
Identities = 101/117 (86%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTC-TGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65
|||||| || ||| |||||||| ||||||| |||| | |||||||||||||| ||||
Sbjct 904 CTTTTGTTCCACACGAGATTTCNTGTTCTCGTTGAGCTCATCTTAGGACACCTGCATTAT 963
Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCG 122
|||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 964 CTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCG 1020
>seq34119
Length=47608
Score = 132 bits (146), Expect = 2e-28
Identities = 95/108 (88%), Gaps = 1/108 (1%)
Strand=Plus/Minus
Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 327
|||||||| ||||||||||||||||||||||| | |||||||||| |||||||| |||||
Sbjct 7588 TCACAAAGCCGGACTAGAGTCAAGCTCAACAGCG-CTTCTTTCCCTGCTGATTCTGCCAA 7530
Query 328 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTG 375
||| |||| ||| || |||||||| || ||||||| | ||||||||||
Sbjct 7529 GCCTGTTCACTTAGCCGTGGTTTCACTGGATAGTATAGAGGGACAGTG 7482
>seq94878
Length=5958
Score = 114 bits (126), Expect = 4e-23
Identities = 70/73 (96%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TTACCCGCGCTTGGTTGA-TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 59
Query 523 TTGCGTCAACATC 535
|||||| | ||||
Sbjct 60 TTGCGTGAGCATC 72
>seq74906
Length=6202
Score = 109 bits (120), Expect = 2e-21
Identities = 71/78 (91%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353
||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||
Sbjct 91 CAACAGGGTCTTCTTTCCCTGCTGATTTTGCCAAGCCTTTTCCCTTGGCTGTGGTTTCGC 32
Query 354 TAGATAGTAGATAGGGAC 371
| ||||||||| ||||||
Sbjct 31 TGGATAGTAGACAGGGAC 14
>seq125583
Length=1492
Score = 78.8 bits (86), Expect = 3e-12
Identities = 81/106 (76%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct 959 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 1018
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||| || ||| | ||||||| |||||||||||| | ||||
Sbjct 1019 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 1064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1633137326016
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