Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Azadirachta_20indica_20[genbank_20GCA_5F000439995.3_202015-06-16] 126,142 sequences; 261,457,759 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq94390 562 9e-158 seq103845 486 6e-135 seq94462 432 1e-118 seq118993 367 4e-99 seq116267 338 2e-90 seq119818 219 1e-54 seq122345 196 1e-47 seq86136 181 3e-43 seq115993 140 1e-30 >seq94390 Length=6339 Score = 562 bits (622), Expect = 9e-158 Identities = 444/520 (85%), Gaps = 20/520 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | | |||||| |||| |||||||||||||||||| Sbjct 5969 GTACTCATTCCAATTACCAGACTCGAT-GAGCCCGGTATTGTTATTTATTGTCACTACCT 5911 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5910 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 5851 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| Sbjct 5850 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTA 5791 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAG-AAATTTGAATGAACCATCGCCGGC 239 |||| |||||||||||||||||||||||||||||| |||||||||||| | |||||||| Sbjct 5790 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGNAAATTTGAATGATGCGTCGCCGGC 5731 Query 240 TC-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGA--AG----G 292 | |||| |||||| ||| |||||| |||||||| || |||| ||| || Sbjct 5730 ACGGTGGCCGTGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGAGCAGAGCCC 5673 Query 293 GCGTTG--GTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGT 349 |||| | ||||||||||||||| || ||||||| ||||||||||||| ||| || Sbjct 5672 GCGTCGACCNNTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCACGT 5613 Query 350 ATTAGCTCTAGAATTACCACGGTT-ATCCATGTAGTAAGGTACTATCAAATAAACGATAA 408 ||||||||||||||||| |||||| |||| |||| || ||| |||||| |||| |||| Sbjct 5612 ATTAGCTCTAGAATTACTACGGTTNATCCGAGTAG-CAGATACCATCAAACAAACTATAA 5554 Query 409 CTGATTTAATGAGCCATTCGCAGTTT-CACTGTATAGATTGCTT---ATACTTAGACATG 464 |||||||||||||||||||||||||| ||| || | ||| || ||||||| ||||| Sbjct 5553 CTGATTTAATGAGCCATTCGCAGTTTNCACAGTCTGAATTAGTTCNNATACTTACACATG 5494 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||| Sbjct 5493 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 5454 >seq103845 Length=957 Score = 486 bits (538), Expect = 6e-135 Identities = 385/451 (85%), Gaps = 15/451 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAG-TATTTATTGTCACTACC 59 ||||||||||||||||| |||| | | |||||| ||| | ||||||||||||||||| Sbjct 510 GTACTCATTCCAATTACCAGACTCGAT-GAGCCCGGTANTTGNTATTTATTGTCACTACC 568 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 569 TCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 628 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| Sbjct 629 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGT 688 Query 180 AGGCCACTATCCTACCATCG-AAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 ||||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||| Sbjct 689 AGGCCTCTATCCTACCATCGAAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGG 748 Query 239 CTC-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAG---- 291 | | |||| |||||| ||| |||||| |||||||| || |||| | | || Sbjct 749 CACGGTGGCCGTGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCC 806 Query 292 GGCGTTGGTTTTTTATCTAAT-AAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGT 349 |||| | ||||||||||| |||| || ||||||| ||||||||||||| ||| || Sbjct 807 CGCGTCGACCTTTTATCTAATNAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCACGT 866 Query 350 ATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAAC 409 ||||||||||||||||| |||||||||| |||| || ||| |||||| |||| ||||| Sbjct 867 ATTAGCTCTAGAATTACTACGGTTATCCGAGTAG-CAGATACCATCAAACAAACTATAAC 925 Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGT 440 |||||||||||||||||||||||||||| || Sbjct 926 TGATTTAATGAGCCATTCGCAGTTTCACAGT 956 >seq94462 Length=1518 Score = 432 bits (478), Expect = 1e-118 Identities = 334/391 (85%), Gaps = 11/391 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | | |||||| |||| |||||||||||||||||| Sbjct 1120 GTACTCATTCCAATTACCAGACTCGAT-GAGCCCGGTATTGTTATTTATTGTCACTACCT 1178 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1179 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1238 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| Sbjct 1239 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTA 1298 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 1299 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCA 1358 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAG----GG 293 | |||| |||||| ||| |||||| |||||||| || |||| | | || | Sbjct 1359 CGGTGGCCGTGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCCG 1416 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352 ||| | |||| |||||||||| || ||||||| ||||||||||||| ||| ||||| Sbjct 1417 CGTCGACCTTTTNTCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCACGTATT 1476 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAG 383 |||||||||||||| |||||||||| |||| Sbjct 1477 AGCTCTAGAATTACTACGGTTATCCGAGTAG 1507 >seq118993 Length=1009 Score = 367 bits (406), Expect = 4e-99 Identities = 283/331 (85%), Gaps = 10/331 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | | |||||| |||| |||||||||||||||||| Sbjct 328 GTACTCATTCCAATTACCAGACTCGAT-GAGCCCGGTATTGTTATTTATTGTCACTACCT 270 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 269 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 210 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| Sbjct 209 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTA 150 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 149 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCA 90 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAG----GG 293 | |||| |||||| ||| |||||| |||||||| || |||| | | || | Sbjct 89 CGGTGGCCGTGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCCG 32 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCT 324 ||| | ||||||||||||||| || |||| Sbjct 31 CGTCGACCTTTTATCTAATAAATGCATCCCT 1 >seq116267 Length=1298 Score = 338 bits (374), Expect = 2e-90 Identities = 219/239 (92%), Gaps = 1/239 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | | |||||| |||| |||||||||||||||||| Sbjct 1061 GTACTCATTCCAATTACCAGACTCGAT-GAGCCCGGTATTGTTATTTATTGTCACTACCT 1119 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1120 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1179 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| Sbjct 1180 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTA 1239 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 1240 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGC 1298 >seq119818 Length=1533 Score = 219 bits (242), Expect = 1e-54 Identities = 138/148 (93%), Gaps = 1/148 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | | |||||| |||| |||||||||||||||||| Sbjct 1275 GTACTCATTCCAATTACCAGACTCGAT-GAGCCCGGTATTGTTATTTATTGTCACTACCT 1217 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1216 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1157 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACC 148 |||||||||||||||||||||||||||| Sbjct 1156 TCTCAGGCTCCCTCTCCGGAATCGAACC 1129 >seq122345 Length=540 Score = 196 bits (216), Expect = 1e-47 Identities = 125/135 (93%), Gaps = 1/135 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | | |||||| |||| |||||||||||||||||| Sbjct 357 GTACTCATTCCAATTACCAGACTCGAT-GAGCCCGGTATTGTTATTTATTGTCACTACCT 299 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 298 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 239 Query 121 TCTCAGGCTCCCTCT 135 ||||||||||||||| Sbjct 238 TCTCAGGCTCCCTCT 224 >seq86136 Length=1723 Score = 181 bits (200), Expect = 3e-43 Identities = 163/200 (82%), Gaps = 10/200 (5%) Strand=Plus/Plus Query 186 CTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AAG 244 |||||||||||||||||||||||||||||||||||||||||| | |||||||| | | Sbjct 1525 CTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGGTG 1584 Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAG----GGCGTTG 298 ||| |||||| ||| |||||| |||||||| || |||| | | || |||| | Sbjct 1585 GCCGTGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCCGCGTCG 1642 Query 299 GTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTC 357 ||||||||||||||| || ||||||| ||||||||||||| ||| |||||||||| Sbjct 1643 ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGGTGCACGTATTAGCTC 1702 Query 358 TAGAATTACCACGGTTATCC 377 ||||||||| |||||||||| Sbjct 1703 TAGAATTACTACGGTTATCC 1722 >seq115993 Length=595 Score = 140 bits (154), Expect = 1e-30 Identities = 94/104 (90%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | | |||||| |||| |||||||||||||||||| Sbjct 493 GTACTCATTCCAATTACCAGACTCGAT-GAGCCCGGTATTGTTATTTATTGTCACTACCT 551 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 104 ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 552 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1508494751232