Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq7515 271 1e-70 >seq7515 Length=2596 Score = 271 bits (300), Expect = 1e-70 Identities = 233/266 (88%), Gaps = 19/266 (7%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGAC-GTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTT 59 ||||||| |||||||| ||||||||||| |||| ||||| ||||||||||||| || || Sbjct 1367 GTACAAAAGGCAGGGAGAGTAGTCAACGC-AGCT-GATGA-TCGCGCTTACTAG-AACTT 1312 Query 60 CCTCGTTGAAGA-CCAACAATTGCAATGATCTATCCCC-ATCACGATGAAATTTCAAAGA 117 | |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1311 CTCAGTTGAAGAGCCAACAATTGCAATGATCTATCCCCCATCACGATGAAATTTCAAAGA 1252 Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTG-AATACA-TCA-GTGTAGCG-CG 173 |||||||| ||||||||||| |||| || |||||| |||||| ||| |||||||| || Sbjct 1251 TTACCCGG-CCTGTCGGCCA-GGTGT--GAATCGTTGCAATACAATCAAGTGTAGCGTCG 1196 Query 174 CG-TGCGGCCCAGAACATC-TAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 || |||||||||||||||| |||| |||||||||||||||||||||||||||||||| || Sbjct 1195 CGGTGCGGCCCAGAACATCCTAAGTGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 1136 Query 232 GCCTAAAAGGCCAT--CTCCCTCGAA 255 ||||||| || ||| |||||| || Sbjct 1135 GCCTAAACGGGCATGAGTCCCTCTAA 1110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751943104150