Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23]
7,810 sequences; 167,352,128 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq7515 271 1e-70
>seq7515
Length=2596
Score = 271 bits (300), Expect = 1e-70
Identities = 233/266 (88%), Gaps = 19/266 (7%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGAC-GTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTT 59
||||||| |||||||| ||||||||||| |||| ||||| ||||||||||||| || ||
Sbjct 1367 GTACAAAAGGCAGGGAGAGTAGTCAACGC-AGCT-GATGA-TCGCGCTTACTAG-AACTT 1312
Query 60 CCTCGTTGAAGA-CCAACAATTGCAATGATCTATCCCC-ATCACGATGAAATTTCAAAGA 117
| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1311 CTCAGTTGAAGAGCCAACAATTGCAATGATCTATCCCCCATCACGATGAAATTTCAAAGA 1252
Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTG-AATACA-TCA-GTGTAGCG-CG 173
|||||||| ||||||||||| |||| || |||||| |||||| ||| |||||||| ||
Sbjct 1251 TTACCCGG-CCTGTCGGCCA-GGTGT--GAATCGTTGCAATACAATCAAGTGTAGCGTCG 1196
Query 174 CG-TGCGGCCCAGAACATC-TAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231
|| |||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||
Sbjct 1195 CGGTGCGGCCCAGAACATCCTAAGTGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 1136
Query 232 GCCTAAAAGGCCAT--CTCCCTCGAA 255
||||||| || ||| |||||| ||
Sbjct 1135 GCCTAAACGGGCATGAGTCCCTCTAA 1110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751943104150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |