Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23]
7,810 sequences; 167,352,128 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq73 161 2e-37
>seq73
Length=180190
Score = 161 bits (178), Expect = 2e-37
Identities = 209/280 (75%), Gaps = 9/280 (3%)
Strand=Plus/Minus
Query 145 AAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTGAAAATAAG 202
|||||||||||| ||||||| |||| | ||| |||| | ||||||| || ||
Sbjct 55725 AAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCCTTAACCAA-GCCACTGCCTATGAG 55668
Query 203 TCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGC-TCCCACTGCTT 261
|||| | | |||| | ||| ||| |||| |||| | | || | | |||||||||||
Sbjct 55667 TCGCCGGCTCATTCTTCAACAGGCACGCGGTCAG--AGCCCAGGGCTCCTCCCACTGCTT 55610
Query 262 GTACGCATACGGTTTCAGGATCTATTT-CACTCCCCTCTCCGGGGTTCTTTTCGCCTTTC 320
| || |||||||||| | ||||||| |||||||| | |||||||||||| || |||
Sbjct 55609 GGGAGCTTACGGTTTCATGTTCTATTTACACTCCCCGATG-GGGGTTCTTTTCACCCTTC 55551
Query 321 CCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCC 380
||||||||||||| ||| |||||||||| ||| |||||||||||||| | | ||||||
Sbjct 55550 CCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCT 55491
Query 381 CCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
| ||||| || || | ||||| || | |||||||
Sbjct 55490 TGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 55451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241503031040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |