Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq6119 84.2 5e-14 >seq6119 Length=2614 Score = 84.2 bits (92), Expect = 5e-14 Identities = 111/148 (75%), Gaps = 7/148 (5%) Strand=Plus/Plus Query 265 CTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGA-TTAGATACCCTGGTAGTCC-- 321 ||||||||||| ||||||| ||||||| || ||| |||||||||| ||||||| Sbjct 371 CTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGAATTAGATACCCCAGTAGTCCCT 430 Query 322 ACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTGCCGCAGCAA 380 | ||||||||||||| ||||||| | | | ||| || | | | |||| | ||| | Sbjct 431 AAGCCGTAAACGATGGATACTAG--GCCTGTGCGTATCGACCCGTGCAGTGCTGTAGCTA 488 Query 381 ACGCAATAAGTATTCCACCTGGGGAGTA 408 |||| ||||||| || ||| ||||||| Sbjct 489 ACGCGTTAAGTATCCCGCCT-GGGAGTA 515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203106030080