Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23]
7,810 sequences; 167,352,128 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq7515 190 4e-46
>seq7515
Length=2596
Score = 190 bits (210), Expect = 4e-46
Identities = 221/275 (80%), Gaps = 20/275 (7%)
Strand=Plus/Plus
Query 66 CGCCGGCTTCTTAGAGGGACT-AT--CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACA 122
|| |||||||||||||||||| || | | | | ||| | ||||||||||||||||||||
Sbjct 1100 CGGCGGCTTCTTAGAGGGACTCATGCCCGTTTAGGCCAA-GGAAGTTTGAGGCAATAACA 1158
Query 123 GGTCTGTGATGCCCTTA-GATGTTCTGGGCCGCA-CGCG-CGCTACAC-TGACAG--AGC 176
|||||||||||| |||| |||||||||||||||| |||| |||||||| ||| |
Sbjct 1159 GGTCTGTGATGCACTTAGGATGTTCTGGGCCGCACCGCGACGCTACACTTGATTGTATTG 1218
Query 177 CAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCT- 235
|||||| |||| |||| |||||| ||| | |||||||||| | ||| | ||||| |
Sbjct 1219 CAACGA-TTCA-CACC-TGGCCGACAGG-CCGGGTAATCTT-TGAAATTTCATCGTGATG 1273
Query 236 GGGGATAGAGCATTGCAATTATT-GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA 294
||||||||| |||||||||| || |||||||||| ||| |||||||||||| |||
Sbjct 1274 GGGGATAGATCATTGCAATTGTTGGCTCTTCAACTGAGAAGTTCTAGTAAGCGCG-ATCA 1332
Query 295 TCAGCACGCGTTGATTAC-GTCCCTGCCCTTTGTA 328
||||| ||||||| ||| |||||||| ||||||
Sbjct 1333 TCAGC-TGCGTTGACTACTCTCCCTGCCTTTTGTA 1366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947126023680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |