Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23]
7,810 sequences; 167,352,128 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq8 93.3 1e-16
seq702 91.5 5e-16
>seq8
Length=41745
Score = 93.3 bits (102), Expect = 1e-16
Identities = 82/96 (85%), Gaps = 5/96 (5%)
Strand=Plus/Minus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGC-TACCTTAGGA 444
|||||||||| ||||||| || ||||||||||||||||||||| ||||| ||||||| ||
Sbjct 262 TCGTTACGCCTTTCGTGCGGG-CGGAACTTACCCGACAAGGAA-TTCGCTTACCTTAAGA 205
Query 445 TGGTTATAGTTACCACCGCCGTTTA-CTGGGGCTTC 479
||||||| ||| |||||||| | | ||||||||
Sbjct 204 CCGTTATAG-TACGGCCGCCGTTCACCGGGGGCTTC 170
>seq702
Length=61672
Score = 91.5 bits (100), Expect = 5e-16
Identities = 84/101 (83%), Gaps = 8/101 (8%)
Strand=Plus/Minus
Query 386 TCGTTACGCCATT-CGTGCAGGTCGGAACTTACC----CGACAAGGAATTTCGCTACC-T 439
|||||||||| || ||||| |||||||||||||| |||||||||||||||||||| |
Sbjct 144 TCGTTACGCCTTTTCGTGCGGGTCGGAACTTACCTCACCGACAAGGAATTTCGCTACCTT 85
Query 440 TAGG-ATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479
|||| | |||| |||||| |||||||| || || |||||
Sbjct 84 TAGGAACCGTTA-AGTTACGGCCGCCGTTCACCGGTGCTTC 45
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702267042560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |