Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Barbarea_20vulgaris_20[genbank_20GCA_5F001920985.1_202016-12-23] 7,810 sequences; 167,352,128 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq8 93.3 1e-16 seq702 91.5 5e-16 >seq8 Length=41745 Score = 93.3 bits (102), Expect = 1e-16 Identities = 82/96 (85%), Gaps = 5/96 (5%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGC-TACCTTAGGA 444 |||||||||| ||||||| || ||||||||||||||||||||| ||||| ||||||| || Sbjct 262 TCGTTACGCCTTTCGTGCGGG-CGGAACTTACCCGACAAGGAA-TTCGCTTACCTTAAGA 205 Query 445 TGGTTATAGTTACCACCGCCGTTTA-CTGGGGCTTC 479 ||||||| ||| |||||||| | | |||||||| Sbjct 204 CCGTTATAG-TACGGCCGCCGTTCACCGGGGGCTTC 170 >seq702 Length=61672 Score = 91.5 bits (100), Expect = 5e-16 Identities = 84/101 (83%), Gaps = 8/101 (8%) Strand=Plus/Minus Query 386 TCGTTACGCCATT-CGTGCAGGTCGGAACTTACC----CGACAAGGAATTTCGCTACC-T 439 |||||||||| || ||||| |||||||||||||| |||||||||||||||||||| | Sbjct 144 TCGTTACGCCTTTTCGTGCGGGTCGGAACTTACCTCACCGACAAGGAATTTCGCTACCTT 85 Query 440 TAGG-ATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 |||| | |||| |||||| |||||||| || || ||||| Sbjct 84 TAGGAACCGTTA-AGTTACGGCCGCCGTTCACCGGTGCTTC 45 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702267042560