Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20
2015-07-07] 40,246 sequences; 566,550,431 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq103 410 2e-112
seq22 390 2e-106
seq147 370 2e-100
seq57 370 2e-100
seq344 313 4e-83
seq96 306 6e-81
seq1 257 3e-66
seq43 248 1e-63
seq1036 210 3e-52
seq808 192 9e-47
>seq103
Length=1049538
Score = 410 bits (454), Expect = 2e-112
Identities = 247/256 (96%), Gaps = 3/256 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 762419 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 762362
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 762361 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAGTTTCAAAGATTA 762302
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
|||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 762301 CCCGGACCTGTCGGTCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 762242
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 762241 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 762182
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 762181 GCCATAGTCCCTCTAA 762166
>seq22
Length=40393389
Score = 390 bits (432), Expect = 2e-106
Identities = 244/257 (95%), Gaps = 4/257 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 33416104 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 33416161
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 33416162 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 33416221
Query 121 CCCGGA-CCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| |||||||| ||||| ||||||||||||||||||| ||||||||| |||||||
Sbjct 33416222 CCCGGAACCTGTCGGTCAAGGCTATAGACTCGTTGAATACATTAGTGTAGCGTGCGTGCG 33416281
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 33416282 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACGTTCGTGGCCTAAAA 33416341
Query 240 GGCCAT-CTCCCTCGAA 255
|||||| |||||| ||
Sbjct 33416342 GGCCATAGTCCCTCTAA 33416358
>seq147
Length=783512
Score = 370 bits (410), Expect = 2e-100
Identities = 238/256 (93%), Gaps = 3/256 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
Sbjct 699878 GTATAAAGGGCAGGGACGTAGTCAACGTGAGCT-GATGACTCGCGCTTACTAGGAATT-C 699821
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|| ||||||||||||||||||||||||||| |||||||||||| || ||||||||||||
Sbjct 699820 CTTATTGAAGACCAACAATTGCAATGATCTAACCCCATCACGATTAAGTTTCAAAGATTA 699761
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
| |||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 699760 CTCGGACCGATCGGTCAAGGTTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 699701
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 699700 CCCAGAACATCTAAGGGCATAACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 699641
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 699640 GCCATAGTCCCTCTAA 699625
>seq57
Length=33024243
Score = 370 bits (410), Expect = 2e-100
Identities = 238/256 (93%), Gaps = 3/256 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
Sbjct 27222519 GTATAAAGGGCAGGGACGTAGTCAACGTGAGCT-GATGACTCGCGCTTACTAGGAATT-C 27222462
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|| ||||||||||||||||||||||||||| |||||||||||| || ||||||||||||
Sbjct 27222461 CTTATTGAAGACCAACAATTGCAATGATCTAACCCCATCACGATTAAGTTTCAAAGATTA 27222402
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
| |||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 27222401 CTCGGACCGATCGGTCAAGGTTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 27222342
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 27222341 CCCAGAACATCTAAGGGCATAACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 27222282
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 27222281 GCCATAGTCCCTCTAA 27222266
>seq344
Length=88605
Score = 313 bits (346), Expect = 4e-83
Identities = 218/245 (89%), Gaps = 2/245 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||| |||||||||||||| | ||||| |||||||||||||||||||||||| |
Sbjct 76588 GTACAAAGGGTAGGGACGTAGTCAATGTGAGCT-GATGACTCGCGCTTACTAGGAATT-C 76645
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 76646 CTCGTTGAAGACAAACAATTGAAATGATTTATCCCCATCACGATGAAATTTCAAAGATTA 76705
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
|| | ||| ||||| ||||| ||||||||||| |||||||| |||||| | || ||||
Sbjct 76706 CCGGAACCCGTCGGTCAAGGCTATAGACTCGTTAAATACATCCGTGTAGTGTGCAAGCGG 76765
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
||| | |||||||||||||||||| || ||||||||||||||| ||||||| |||| |||
Sbjct 76766 CCCTGGACATCTAAGGGCATCACAAACTTGTTATTGCCTCAAAATTCCGTGACCTAGAAG 76825
Query 241 GCCAT 245
|||||
Sbjct 76826 GCCAT 76830
>seq96
Length=52461754
Score = 306 bits (338), Expect = 6e-81
Identities = 185/193 (96%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 8 GGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTG 67
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 45403668 GGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-CCTCGTTG 45403725
Query 68 AAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGAC 127
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 45403726 AAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAGTTTCAAAGATTACCCGGAC 45403785
Query 128 CTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAA 187
|| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 45403786 CTATCGGTCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAA 45403845
Query 188 CATCTAAGGGCAT 200
|||||||||| ||
Sbjct 45403846 CATCTAAGGGGAT 45403858
Score = 127 bits (140), Expect = 3e-27
Identities = 85/92 (92%), Gaps = 2/92 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||| || |||||||||||||| ||||| ||||||||||||||||||||||| |
Sbjct 39586647 GTACAAAGGACAAGGACGTAGTCAACGGGAGCTA-ATGACTCGCGCTTACTAGGAATT-C 39586704
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTAT 92
|||||||||||| |||||||||||||||||||
Sbjct 39586705 CTCGTTGAAGACTAACAATTGCAATGATCTAT 39586736
>seq1
Length=34941034
Score = 257 bits (284), Expect = 3e-66
Identities = 216/260 (83%), Gaps = 9/260 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||| ||| ||||||| |||| | |||| ||||| ||| ||||||||| |
Sbjct 5531566 GTACAAAGGGCAGAGAC--AGTCAACACGAGAT-GATGGCTCGCACTTTCTAGGAATT-C 5531511
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||| ||||||||||||| |||||||||||||||||| || ||
Sbjct 5531510 CTCGTTGAAGACCAACAATTGTAATGATCTATCCCTATCACGATGAAATTTCAATGAGTA 5531451
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG- 179
|||| ||| ||| ||| || || |||| ||||||||||||||||||| || ||||||
Sbjct 5531450 CCCGTGCCTATCGATCAATGTTATGGACTTGTTGAATACATCAGTGTAGAGCTCGTGCGG 5531391
Query 180 ---GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236
||| | | ||||||||| ||||| |||||| |||||||||||| |||| ||||
Sbjct 5531390 CGCGCCTAAATGATCTAAGGGAATCACGGACCTGCACCTGCCTCAAACTTGCGTGACCTA 5531331
Query 237 AAAGGCCAT-CTCCCTCGAA 255
||||||||| |||||| ||
Sbjct 5531330 AAAGGCCATAGTCCCTCTAA 5531311
>seq43
Length=26577699
Score = 248 bits (274), Expect = 1e-63
Identities = 211/256 (82%), Gaps = 12/256 (5%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||| | || ||||| || | ||||||| | ||||| ||||||||||
Sbjct 21125991 GTACAAAGGGCAGGTATGTT---AACGCAAGAT-GATGACTGGTGCTTATTAGGAATTTC 21126046
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 21126047 TTGGT-GAAGACCAACAATTGCAATGATTTATCCCCATCACGATGAAATTTCAAAGATTA 21126105
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||||||||| || ||||| ||| ||||||||||||||| | | |||| | |
Sbjct 21126106 CCCGGACCTGTTGGTCAAGGCTATACACTCGTTGAATACATTATTATAGCTCCTG----- 21126160
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
| |||||| ||||||| || | | ||||||||||||||||||||| | |||||||| ||
Sbjct 21126161 -CTAGAACACCTAAGGGTATTATATACCTGTTATTGCCTCAAACTTTCATGGCCTAACAG 21126219
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 21126220 GCCATAGTCCCTCTAA 21126235
>seq1036
Length=7046
Score = 210 bits (232), Expect = 3e-52
Identities = 208/259 (80%), Gaps = 9/259 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |
Sbjct 2429 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 2486
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || |||||||| | ||||| | ||||| | | ||||| | ||
Sbjct 2487 CTCGTTCATGGGGAATAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAACGGGTT 2546
Query 120 ACCCGGACCTGTCGGCCAAGGTG-ATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|||||| ||| ||| ||| | | |||| || ||| | | ||||||||||||||||||
Sbjct 2547 ACCCGGTCCTTACGGATCAGGAGGAGAGACACGCTGATTCCTTCAGTGTAGCGCGCGTGC 2606
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAA 237
||||| |||||||||||||||||||||||||||||||| ||||| || |||| | ||||
Sbjct 2607 GGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGTGACTAA 2663
Query 238 AAGGC-CATCTCCCTCGAA 255
| | | | | |||||| ||
Sbjct 2664 ACGCCACTTGTCCCTCTAA 2682
>seq808
Length=9131
Score = 192 bits (212), Expect = 9e-47
Identities = 184/229 (80%), Gaps = 5/229 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| || | || || |||||||| ||| ||||||||||| |
Sbjct 6330 GTACAAAGGGCAGGGACGTAATCGATGC-AGGTTGATGACCTGCGTCTACTAGGAATT-C 6273
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119
||||||| | || | |||||| | | ||| | |||| | |||||||| ||||
Sbjct 6272 CTCGTTGGTG-CCTCTAGTTGCAAGAGGCAAGCCCAAGCACGCTAGGATTTCAAAAGATT 6214
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
| || | ||| ||| ||||| | | |||||||||| | || |||||||||||||||
Sbjct 6213 AACCAGGCCTCTCGACCAAG-TCCGATACTCGTTGAACCTAGCATTGTAGCGCGCGTGCG 6155
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6154 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 6106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751706807890
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