Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20
2015-07-07] 40,246 sequences; 566,550,431 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq23724 181 1e-43
seq5225 156 4e-36
seq4893 152 5e-35
seq6614 138 1e-30
seq4392 122 9e-26
seq6263 118 1e-24
seq31559 102 9e-20
seq20287 102 9e-20
seq7914 89.7 5e-16
seq40246 86.0 7e-15
seq27127 84.2 2e-14
seq331 84.2 2e-14
seq19242 82.4 8e-14
seq28795 80.6 3e-13
seq21987 77.0 3e-12
seq15983 77.0 3e-12
>seq23724
Length=580
Score = 181 bits (200), Expect = 1e-43
Identities = 145/175 (83%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
|| |||| |||||| ||||||| | |||||| |||||| ||| ||||||||||||| ||
Sbjct 178 CGTAAACCGACACAGGTAGTCGAGAAGAATATTCTAAGGTGCTCGAGTGAATCACGGCTA 119
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
||||||| |||||| | ||||||||||||||||| || ||| ||| | | | || | ||
Sbjct 118 AGGAACTCGGCAAATTAACCCTGTAACTTCGGGAGAAGGGGAGCCTCCTCTGCAAAGAGA 59
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| ||||||||| || |||||| |||||||| ||||||||||||||| ||||||
Sbjct 58 GGCCGCAGAGAAATGGCCCAGGCGACTGTTTAGCAAAAACACAGGGCTCTGCCAA 4
>seq5225
Length=903
Score = 156 bits (172), Expect = 4e-36
Identities = 140/175 (80%), Gaps = 7/175 (4%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
|| |||| |||||| ||||||| | || ||| |||||||||| ||||||| ||||||||
Sbjct 162 CGTAAACCGACACAGGTAGTCGAGGAGAGTATCCTAAGGCGCTCGAGTGAACCACGGTTA 221
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
|||||||||||||| | ||| |||||||||||| || ||| ||| || | |
Sbjct 222 AGGAACTAGGCAAATTAGCCCCGTAACTTCGGGAGAAGGGG----CACCACGA---GAGT 274
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| ||||| ||| |||||||||| |||||||| |||||||||||| || ||||||
Sbjct 275 GGTCGCAGTGAAGAGGTCCAGGCGACTGTTTAGCAAAAACACAGGACTCTGCCAA 329
>seq4893
Length=910
Score = 152 bits (168), Expect = 5e-35
Identities = 140/175 (80%), Gaps = 3/175 (2%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
|| |||| |||||| ||||||| | || || |||||| ||| |||||| ||| || ||
Sbjct 698 CGTAAACCGACACAGGTAGTCGAGGAGAGAATCCTAAGGTGCTCGAGTGATTCATGGCTA 757
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
||||||| |||||| || |||||||||||||||| || ||| ||| | || ||| ||
Sbjct 758 AGGAACTCGGCAAAATGGCCCTGTAACTTCGGGAGAAGGGGCGCCT--CTAGCAAT-AGA 814
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| ||||| ||| ||| |||||| ||||||||||||||||||| |||| ||| ||
Sbjct 815 GGCCGCAGTGAAAAGGCCCAGGCGACTGTTTAACAAAAACACATGGCTTTGCTAA 869
>seq6614
Length=860
Score = 138 bits (152), Expect = 1e-30
Identities = 137/175 (78%), Gaps = 3/175 (2%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
|| |||| |||||| ||||| | | || || |||||| ||| ||| || ||| || ||
Sbjct 237 CGTAAACCGACACAGGTAGTTGAGGAGAGAATCCTAAGGTGCTCGAGAGATTCATGGCTA 296
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
||||| |||||||| | ||||||||||||||| ||| |||| | | ||| ||| |
Sbjct 297 AGGAATTAGGCAAAATAGACCTGTAACTTCGGGAGAAA-GGTCGCCCCGCAGCAAT--CA 353
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| ||||| ||| |||||||||| |||||||| ||||||||||||||| ||| ||
Sbjct 354 GGCCGCAGTGAAGAGGTCCAGGCGACTGTTTATCAAAAACACAGGGCTCTGCAAA 408
>seq4392
Length=923
Score = 122 bits (134), Expect = 9e-26
Identities = 135/176 (77%), Gaps = 7/176 (4%)
Strand=Plus/Minus
Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84
|||| |||||| || | | ||| || ||||| |||||||||||| |||| | | ||||
Sbjct 801 AAACCGACACAGGTGGACTGGTAGAGTATACCAAGGCGCTTGAGGGAATGGTGTTGAAGG 742
Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCC-CTACCCAGAAATGG---G 140
||||||||||| | ||| ||||||||||||||| ||| || ||| | | | | |
Sbjct 741 AACTAGGCAAATTACCCCCGTAACTTCGGGATAAGGGGGCCTCTATC--GGTCTCGATAG 684
Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|||| ||| | | |||| |||||||||||||||||||||||||||| ||| ||
Sbjct 683 AGGG-GCACAAACTAGGGGGTGGCAACTGTTTAACAAAAACACAGGGCTCTGCTAA 629
>seq6263
Length=875
Score = 118 bits (130), Expect = 1e-24
Identities = 134/177 (76%), Gaps = 7/177 (4%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
|| |||| |||||| ||||||| | ||| ||| |||||||||| | |||| | ||| |
Sbjct 622 CGTAAACCGACACAGGTAGTCGAGATGAGTATTCTAAGGCGCTCGGGTGAGCCGCGGAGA 681
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACC-CAGAAATGGG 140
|||||||||||||| | | ||||||||||||||||||| | |||| ||| || |
Sbjct 682 AGGAACTAGGCAAATTAATGCTGTAACTTCGGGATAAAG----CATACCACAGCGAT--G 735
Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAAT 197
|| | ||| || ||| || |||||||||| |||||||| ||||| ||| |||
Sbjct 736 TGGTCACAGTAAAATGGTTCAACCAACTGTTTAGCAAAAACATAGGGCCCTGCAAAT 792
>seq31559
Length=506
Score = 102 bits (112), Expect = 9e-20
Identities = 132/180 (73%), Gaps = 8/180 (4%)
Strand=Plus/Minus
Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84
|||| |||||| || | | ||| || ||||| |||||||||||| ||| | | | ||||
Sbjct 468 AAACCGACACAGGTGGACTGGTAGAGTATACCAAGGCGCTTGAGAGAACTATGCTGAAGG 409
Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA--AGG----GTCCCTACCCAGAAATG 138
|||| ||||| | | | ||||||||||||||| ||| || | ||| || |
Sbjct 408 AACTCGGCAATTTACCTCCGTAACTTCGGGATAAGGAGGCCCAGTGCTTACGCAAGCTAG 349
Query 139 GGA--GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
| | ||| ||| ||| ||| |||||||||||||||||||||||||||| ||| ||
Sbjct 348 GCATTGGGGGCACAGACCAGGGGGTGGCAACTGTTTAACAAAAACACAGGGCTCTGCGAA 289
>seq20287
Length=630
Score = 102 bits (112), Expect = 9e-20
Identities = 83/101 (82%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
|| |||| |||||| ||||||| | || || |||||| ||| |||||||||| || ||
Sbjct 113 CGTAAACCGACACAGGTAGTCGAGGAGAGAATCCTAAGGTGCTCGAGTGAATCATGGCTA 54
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122
||||||| |||||| || |||||||||||||||| || |||
Sbjct 53 AGGAACTCGGCAAAATGGCCCTGTAACTTCGGGAGAAGGGG 13
>seq7914
Length=825
Score = 89.7 bits (98), Expect = 5e-16
Identities = 125/175 (71%), Gaps = 3/175 (2%)
Strand=Plus/Minus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
||||||| |||||| || | |||| |||||||| |||||| ||||||| | ||||
Sbjct 725 CGCAAACCGACACAGGTGGGTGGGTAGAATATACCAAGGCGAAAGAGTGAAACCTCGTTA 666
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
||||||| |||| || || |||||||||| | || || | || | | ||
Sbjct 665 AGGAACTCTGCAATCTAGTCCCGTAACTTCGGAAGAAGGGATGCCCAAGCTTGCTTG--- 609
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| ||||| ||| || || | |||||||| ||||||||||| ||||||||
Sbjct 608 GGTCGCAGTGAAAGGGGACAACCGACTGTTTATCAAAAACACAGCATTGTGCCAA 554
>seq40246
Length=368801
Score = 86.0 bits (94), Expect = 7e-15
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || | || || ||||||| |||||||||| ||| || | |||
Sbjct 126914 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 126855
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123
||||| |||||| |||||| |||||||||||| || ||||
Sbjct 126854 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 126815
Score = 86.0 bits (94), Expect = 7e-15
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || | || || ||||||| |||||||||| ||| || | |||
Sbjct 214291 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 214350
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123
||||| |||||| |||||| |||||||||||| || ||||
Sbjct 214351 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 214390
Score = 86.0 bits (94), Expect = 7e-15
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || | || || ||||||| |||||||||| ||| || | |||
Sbjct 350264 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 350323
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123
||||| |||||| |||||| |||||||||||| || ||||
Sbjct 350324 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 350363
>seq27127
Length=557
Score = 84.2 bits (92), Expect = 2e-14
Identities = 125/175 (71%), Gaps = 2/175 (1%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
||||| | |||||| || | | || ||| | |||||| | | | ||| | || |
Sbjct 102 CGCAATCCGACACAGGTGTGCTAGGCGAGTATCCGAAGGCGTTCGGGAGAACCCTCGTGA 161
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
||||||| |||||| |||||| ||| |||||| |||| |||| | | | || ||
Sbjct 162 AGGAACTCGGCAAAATGACCCCGTACCTTCGGTATAAGGGGTGCTCAGGG-GCAACCCGA 220
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
| |||||||||| || | || |||||||| |||||||||||| || ||||||
Sbjct 221 GC-CGCAGAGAATCGGCTCTAGCGACTGTTTATCAAAAACACAGGACTCTGCCAA 274
>seq331
Length=107979
Score = 84.2 bits (92), Expect = 2e-14
Identities = 85/110 (77%), Gaps = 2/110 (2%)
Strand=Plus/Plus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| || | || ||| |
Sbjct 52160 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCACAAA--G 52217
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || || || || ||| || ||| |||||||| |||||||||||| ||
Sbjct 52218 GGGGTCGAAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 52267
>seq19242
Length=650
Score = 82.4 bits (90), Expect = 8e-14
Identities = 129/180 (72%), Gaps = 10/180 (6%)
Strand=Plus/Plus
Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84
|||| |||||| || ||| ||| || ||||| |||||||||||| ||| | | ||||
Sbjct 394 AAACCGACACAGGTGGTCAGGTAGAGTATACCAAGGCGCTTGAGAGAACTGTGCTGAAGG 453
Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCT-ACCCAG----AAATGG 139
|||| |||||| || | |||||||||| || ||| || || |||||| | |||
Sbjct 454 AACTCGGCAAATTGCACGCGTAACTTCGGAAT-AAGCGTGACTCACCCAGCGCAAGCTGG 512
Query 140 ---GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
||| | ||| | ||| || |||||||| ||||||||||||||| ||| ||
Sbjct 513 ACTGAGTG-GCACAAGCCAGGGGGTAGCGACTGTTTAGCAAAAACACAGGGCTCTGCGAA 571
>seq28795
Length=541
Score = 80.6 bits (88), Expect = 3e-13
Identities = 128/181 (71%), Gaps = 11/181 (6%)
Strand=Plus/Minus
Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84
||||| ||||| |||| || | || || ||||||||| | | ||| ||||||||
Sbjct 453 AAACG-ACACAGGTAGGCGAGGCGAGTAGCCTAAGGCGCGCGGGAGAACGGTGGTTAAGG 395
Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG-TCCCTAC--------CCAGAA 135
|||| ||||| | ||| ||||||||||||||| ||| |||| | || |
Sbjct 394 AACTCTGCAAATTTTCCCCGTAACTTCGGGATAAGGGGCGCCCTGCGATGTGTTAAAGCA 335
Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCA 195
|| | || ||||| |||| || | || |||||||| |||||||||||| || ||| |
Sbjct 334 TTGCGGGGCCGCAG-GAATTGGCTCTAGCGACTGTTTATCAAAAACACAGGACTCTGCGA 276
Query 196 A 196
|
Sbjct 275 A 275
>seq21987
Length=612
Score = 77.0 bits (84), Expect = 3e-12
Identities = 79/102 (77%), Gaps = 1/102 (1%)
Strand=Plus/Minus
Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84
|||| |||||| || | | |||||| |||| |||||||||||| ||| | | ||||
Sbjct 117 AAACCGACACAGGTGGACTGGTTGAGAATACCAAGGCGCTTGAGAGAACTATCTTGAAGG 58
Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCC 125
||||||||||| || || |||||||||| | || |||| ||
Sbjct 57 AACTAGGCAAATTGCCCTCGTAACTTCGGAAGAAGAGGGCCC 16
>seq15983
Length=684
Score = 77.0 bits (84), Expect = 3e-12
Identities = 74/95 (78%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| ||| || || | |||| ||||||| | ||||||| |||| ||| || ||||
Sbjct 395 CAAACCGACTCAGGTGGGCGGGGTGAATATCCCAAGGCGCGTGAGAGAACTCTGGCTAAG 454
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118
||||| |||||| ||| | |||||||||||| ||
Sbjct 455 GAACTCGGCAAATTGATACCGTAACTTCGGGAGAA 489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530992894084
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