Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20
2015-07-07] 40,246 sequences; 566,550,431 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq1036 96.9 2e-18
seq808 80.6 1e-13
seq35727 75.2 5e-12
seq35011 75.2 5e-12
seq20128 75.2 5e-12
seq147 75.2 5e-12
seq57 75.2 5e-12
seq5109 71.6 6e-11
>seq1036
Length=7046
Score = 96.9 bits (106), Expect = 2e-18
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||||
Sbjct 1383 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAAGCGGGATGAGCCCAGCA 1324
Query 61 CCGAATCC-CCGC 72
|||||||| ||||
Sbjct 1323 CCGAATCCTCCGC 1311
>seq808
Length=9131
Score = 80.6 bits (88), Expect = 1e-13
Identities = 52/57 (91%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57
||||||||||||||| |||||||||| |||||||||||||||| ||||||||| ||
Sbjct 6941 GGAAAAGAAACTAACTAGGATTCCCTTAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 6997
>seq35727
Length=1446
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 59 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 1
>seq35011
Length=1599
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 917 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 859
>seq20128
Length=639
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 296 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 354
>seq147
Length=783512
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 700727 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 700785
>seq57
Length=33024243
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 27223368 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 27223426
>seq5109
Length=906
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| |||| ||||||||
Sbjct 901 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCTGGAACAGCCCAGC 843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230313068640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |