Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20
2015-07-07] 40,246 sequences; 566,550,431 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq1433 475 6e-132
seq31184 410 2e-112
seq1486 399 4e-109
seq97 381 1e-103
seq344 372 5e-101
seq145 345 7e-93
seq17505 325 7e-87
seq28153 315 1e-83
seq66 307 2e-81
seq34927 302 8e-80
seq31500 273 4e-71
seq43 154 3e-35
seq22 149 1e-33
seq34656 145 1e-32
seq1 131 3e-28
seq3069 114 2e-23
seq808 113 8e-23
seq36990 109 9e-22
seq2 100 5e-19
seq7668 89.7 9e-16
seq18390 87.8 3e-15
seq18567 78.8 2e-12
>seq1433
Length=3754
Score = 475 bits (526), Expect = 6e-132
Identities = 283/295 (96%), Gaps = 1/295 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||||
Sbjct 3182 TACTAAGCTCAATTACCATTGCGACGAAA-TCATCAGTAGGGTAAAACTAACCTGTCTCA 3240
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3241 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 3300
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3301 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 3360
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3361 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 3420
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3421 CAAACTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 3475
>seq31184
Length=522
Score = 410 bits (454), Expect = 2e-112
Identities = 250/264 (95%), Gaps = 1/264 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||| ||| |||||||||||| | ||| | ||||||||||||||||||||||||||||||
Sbjct 260 TACTGAGCTGAATTACCATTGCGACGA-GATCATCAGTAGGGTAAAACTAACCTGTCTCA 318
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 319 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 378
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 379 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 438
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 498
Query 241 CAAATTTCGAGGGACTAAAGGATC 264
|||| ||||| ||||||||||
Sbjct 499 CAAACCCCGAGGATCTAAAGGATC 522
>seq1486
Length=6015
Score = 399 bits (442), Expect = 4e-109
Identities = 265/293 (90%), Gaps = 1/293 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | |||||||||| | | || ||||||||||||||||||||||||||| |||
Sbjct 5488 TACTAGGTTGAATTACCATCGCGAT-ACTGTCATCAGTAGGGTAAAACTAACCTGTATCA 5546
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||| |||||||||||||||| |||||||||||||||||| |||| ||
Sbjct 5547 CGACGGTCTAAACCCTGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTAGTGA 5606
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 5607 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTTT 5666
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 5667 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 5726
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||||||| || | ||||||||| |||||||| |||||| |||||||||||
Sbjct 5727 CAAATTTCGAAGGTCGAAAGGATCGTTAGGCCACGCTTTCACGGTTTGTATTC 5779
>seq97
Length=519377
Score = 381 bits (422), Expect = 1e-103
Identities = 261/293 (89%), Gaps = 1/293 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | |||||||||| | | | || |||||| |||||||||||||||||||||||
Sbjct 420971 TACTAGGTTGAATTACCATCGCGAC-ACTATCATCAATAGGGTAAAACTAACCTGTCTCA 420913
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||| ||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 420912 CGACAGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 420853
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 420852 ATTCTGCTTCACAATGATAGGAAGAGCCATCATCGAAGGATCAAAAAGCAACGTCGCTAT 420793
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 420792 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 420733
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| | ||||||||||| |||||||| |||||| |||| ||||||
Sbjct 420732 CAAATTCCGAATGTCTAAAGGATCGTTAGGCCACGCTTTCACGGTTCGTATTC 420680
>seq344
Length=88605
Score = 372 bits (412), Expect = 5e-101
Identities = 254/284 (89%), Gaps = 4/284 (1%)
Strand=Plus/Minus
Query 12 ATTACCATTGGGGCGA--CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
||||||| | | |||| | ||||||||||||||||||||||||||||||| ||||||||
Sbjct 7056 ATTACCAATTGTGCGATACTGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 6997
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||| ||| |||||||||| || ||| |||||||||||
Sbjct 6996 AAACCCAGCTCACGTTCCCTATTGGTGAGTGAACAATC--ACACTTGGTGAATTCTGCTT 6939
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 6938 CACAATGATAGGAAGAGCCGAGATTGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 6879
Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |
Sbjct 6878 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCA 6819
Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| || ||||||||||| |||||||| |||||| |||| ||||||
Sbjct 6818 AAGGTCTAAAGGATCGTTAGGCCACGCTTTCACGGTTCGTATTC 6775
Score = 360 bits (398), Expect = 3e-97
Identities = 243/271 (90%), Gaps = 1/271 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | |||||||||| | | || |||||||||||||||||| ||||||||||||
Sbjct 26524 TACTAGGTTGAATTACCATCGCGAT-ACTGTCATCAGTAGGGTAAAAATAACCTGTCTCA 26466
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||| |||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 26465 CGACGATCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 26406
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 26405 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATAAAAAAGCAACGTCGCTAT 26346
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |
Sbjct 26345 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGATAACTTTTCTGACACCTCTAGCTT 26286
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGC 271
|||||| ||| || ||||||||||| |||||
Sbjct 26285 CAAATTCCGAAGGTCTAAAGGATCGTTAGGC 26255
>seq145
Length=44152522
Score = 345 bits (382), Expect = 7e-93
Identities = 254/294 (86%), Gaps = 10/294 (3%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACT-AACCTGTCTC 59
||||| | |||||||||| || |||||||||||||||||| ||||||||||
Sbjct 447116 TACTAGGTTGAATTACCATC------ACCGTCATCAGTAGGGTAAAAAACAACCTGTCTC 447063
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| ||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| |
Sbjct 447062 AGGACGGTCTAAACCGAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTT---G 447006
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 447005 AATTCTGCTTCACAACGATAGGAAGAGCCGACATTGAAGGATCAAAAAGCAACGTCGCTA 446946
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 446945 TGAACGTTTGGCTGCCACAAGCCAGTTATCCCTTTGGTAACTTTTCTGACACCTCTAGCT 446886
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||||||||||| || ||||| |||| ||||||| |||||| ||| ||||||
Sbjct 446885 TCAAATTTCGAAGGTCTAAAAGATCACAAGGCCACGCTTTCACAGTTCGTATTC 446832
Score = 311 bits (344), Expect = 1e-82
Identities = 206/227 (91%), Gaps = 1/227 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | |||||||||| | | || ||||| ||||||||||||||||||| |||||
Sbjct 6741051 TACTAGGTTGAATTACCATCGCGAT-ACTGTCATTAGTAGGGTAAAACTAACCTATCTCA 6740993
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 6740992 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 6740933
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6740932 ATTCTACTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 6740873
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTG 227
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6740872 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTG 6740826
Score = 95.1 bits (104), Expect = 2e-17
Identities = 71/82 (87%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | |||||||||||| | | || ||||||||||||||||||||||||||||||
Sbjct 6913923 TACTAGGTTGAATTACCATTGTGAC-ACTATCATCAGTAGGGTAAAACTAACCTGTCTCA 6913981
Query 61 TGACGGTCTAAACCCAGCTCAC 82
|||| ||||||||||| ||||
Sbjct 6913982 TGACAGTCTAAACCCATGTCAC 6914003
>seq17505
Length=671
Score = 325 bits (360), Expect = 7e-87
Identities = 213/235 (91%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||| ||| | ||||| || | || || || ||||||||||||||||||||||||||
Sbjct 437 TACTGAGCCGGATTACTATGGCGGGATCGAACAACAGTAGGGTAAAACTAACCTGTCTCA 496
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 497 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTGGTGA 556
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 557 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 616
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCT 235
||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 617 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAATTTTTCTGACACCTCT 671
>seq28153
Length=552
Score = 315 bits (348), Expect = 1e-83
Identities = 230/265 (87%), Gaps = 4/265 (2%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 540 TCATTGGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTG 481
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
|| |||| |||||||||| || ||| | | |||| | |||||||||||||||||
Sbjct 480 TTGGTGGATGAACAATCCGACACTTGGCCTCTGCTGCGAGGCAATGATAGGAAGAGCCGA 421
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 CATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 361
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA--TTTCGAGGGACTAAAGGATCGATA 268
||||||||||||||||| ||||||| || | ||| ||| ||| | ||||||||||||
Sbjct 360 CTGTGGTAACTTTTCTGACACCTCTGGCTTAAAACCTTTAAAGG--CCAAAGGATCGATA 303
Query 269 GGCCACACTTTCATGGTTTGTATTC 293
||||| |||||| ||||||||||
Sbjct 302 GGCCATGCTTTCACAGTTTGTATTC 278
>seq66
Length=1325581
Score = 307 bits (340), Expect = 2e-81
Identities = 228/266 (86%), Gaps = 4/266 (2%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||| ||||||||||||||| ||||||| |||||||||||||||||||| |||| ||
Sbjct 1067805 TCATCAATAGGGTAAAACTAACTTGTCTCACAACGGTCTAAACCCAGCTCACATTCCATA 1067746
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
|| |||||||||||||||| | ||| ||||||| |||| ||||||| ||||| |||
Sbjct 1067745 TTGGTGGGTGAACAATCCAGCACTTGGTGAATTCTACTTCACAATGATAGAAAGAGACGA 1067686
Query 151 CATCGA----AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
|||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1067685 CATCGATCGTAGGATCAAAAAGCAACGTCGCTATGAACCCTTGGCTGCCACAAGCCAGTT 1067626
Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266
|||| |||||||||| |||| |||||||||| |||| || | | || |||||||| |
Sbjct 1067625 ATCCATGTGGTAACTCTTCTAACACCTCTAGCTTCAATTTCCAAAGGTATAAAGGATAGT 1067566
Query 267 TAGGCCACACTTTCATGGTTTGTATT 292
|||||||||||||||| ||||||||
Sbjct 1067565 TAGGCCACACTTTCATTATTTGTATT 1067540
>seq34927
Length=1620
Score = 302 bits (334), Expect = 8e-80
Identities = 202/224 (90%), Gaps = 1/224 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | |||||||||| | || ||||||||||||||||||||||||| |||||
Sbjct 610 TACTAGGTTGAATTACCATCACGAT-ACTGTCATCAGTAGGGTAAAACTAACCTATCTCA 552
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 551 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 492
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 491 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATAAAAAAGCAACGTCGCTAT 432
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 431 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAATTTTT 388
>seq31500
Length=518
Score = 273 bits (302), Expect = 4e-71
Identities = 206/240 (86%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95
||||||||||||||||||||||||| |||||||||||||||||||||||||| || |
Sbjct 280 AGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCTCGTTTAT 339
Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155
||||||||||| ||| ||| | | |||| || ||||| |||||||||||||||
Sbjct 340 AGGTGAACAATCTAACACTTTGGGCCTACTGCAACGCAATGATGAGAAGAGCCGACATCG 399
Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 400 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 459
Query 216 GTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGAC-TAAAGGATCGATAGGCCAC 274
|||||||||||| ||||||||| | || || | || |||||||||| ||||||||
Sbjct 460 GTAACTTTTCTGACACCTCTAGGC-GGAAGCGCGCCGCACATAAAGGATCGTTAGGCCAC 518
>seq43
Length=26577699
Score = 154 bits (170), Expect = 3e-35
Identities = 146/183 (80%), Gaps = 10/183 (5%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | |||||||||| | | | | ||||||| |||||||||| |||| |||||||
Sbjct 4860539 TACTAGGTTGAATTACCATCGTGAC-ATTGTCATCAATAGGGTAAAAGTAACTTGTCTCA 4860481
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||| ||||||||| |||| |||| ||||||| |||| ||| |||
Sbjct 4860480 CAACGGTCTAT-CCCAGCTCAATTTCC-TATTGGTGGGTG-------CAACACTTGGCGA 4860430
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||| |||||||| | |||||| ||||||||||||||||||
Sbjct 4860429 ATTCTGCTTCACAATGATAGGAATAGCCGACAACAAAGGATAAAAAAGCAACGTCGCTAT 4860370
Query 181 GAA 183
|||
Sbjct 4860369 GAA 4860367
>seq22
Length=40393389
Score = 149 bits (164), Expect = 1e-33
Identities = 200/278 (72%), Gaps = 24/278 (9%)
Strand=Plus/Plus
Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||||||||||| | || |||| | || ||| ||| |||| ||||| ||||| |||
Sbjct 1449336 GAATTACCATTGGGAC-ACACTCATTAATAAGGTTAAAGTAACTTGTCTTATGACAATCT 1449394
Query 70 AAACCCAGCTCACGTTCCCTATTA-----GTGGGTGAACAATCCAACGCTTACCGAATTC 124
|||||| ||| | ||||| |||| || || ||| |||||||| ||| ||| ||
Sbjct 1449395 AAACCCCGCTTAAGTTCCATATTGTCTATGTCGGCGAATAATCCAACACTTGGTGAAATC 1449454
Query 125 TGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAC 184
|||||| | ||||||||||||| ||||||||||| || | || |||| |
Sbjct 1449455 TGCTTCAG---------AAGAGCCGACATCCAAGGATCAAAACACAGCATCACTATATAT 1449505
Query 185 GCTTGGCTGCCACAAGCC--------AGTTATCCCTGTGGTAACTTTTCTGGCACCTCTA 236
||||||||| |||||||| | |||| ||||||||||||| || ||||| ||
Sbjct 1449506 GCTTGGCTGTCACAAGCCCTTTATCTAACTATCAATGTGGTAACTTTT-TGACACCTTTA 1449564
Query 237 GCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCAC 274
||||||| ||| |||| ||||| | ||||||
Sbjct 1449565 TGTTCAAATTCCGAATATTTAAAAGATCGTTTGGCCAC 1449602
Score = 123 bits (136), Expect = 4e-26
Identities = 163/222 (73%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 15 ACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACC 74
|||||| ||| || |||||| |||| ||||| ||| |||||| ||| | |||
Sbjct 452345 ACCATTATGGC-ACTCTCATCATTAGGATAAAATTAAATTGTCTCGAGACAACTTGAACT 452287
Query 75 CAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 134
|| ||||||||| | || |||||||||||||| ||| | | ||| |||||||| |
Sbjct 452286 CAACTCACGTTCA-TGTTGGTGGGTGAACAATCAAACACGTGGTGAA-TCTGCTTCATAA 452229
Query 135 TGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC 194
||||| ||||| ||||| ||| ||||||||| ||| |||| ||| | || || | |
Sbjct 452228 TGATAACAAGAGTCGACACCGAGGGATCAAAATGCATCGTCTCTAAGGACATTTCGTTAT 452169
Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTA 236
| ||||||| ||||| | |||| ||||||| | |||| ||
Sbjct 452168 CGCAAGCCAATTATCATTCTGGTCACTTTTCCGAAACCTTTA 452127
Score = 104 bits (114), Expect = 4e-20
Identities = 161/229 (70%), Gaps = 17/229 (7%)
Strand=Plus/Plus
Query 43 TAAAACTAACCTGTCTCATGACGGTCTAAACCCAG-CTCACGTTCCCTATTAGTGGGTGA 101
||||| |||| | || ||| || |||||| |||| | || || | ||| ||| |
Sbjct 38309932 TAAAATTAACATATCGCATTACAGTCTAATCCCAAACCCATATTTTC-ATTGATGGACAA 38309990
Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161
|||||||| | ||| ||| || |||| ||||||| |||| |||||| |||||||
Sbjct 38309991 ACAATCCATCACTTGGTGAAGTCGACTTCTTAATGATAGAAAGAACCGACACCGAAGGAG 38310050
Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221
|||||| || ||| | |||||| |||||| ||||||||||||| ||||||
Sbjct 38310051 AAAAAAGAAA---------GAATGTTTGGCTACCACAACTCAGTTATCCCTGTCGTAACT 38310101
Query 222 TTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
||||| ||| | |||| || | | | ||||||||||| ||||
Sbjct 38310102 ATTCTGACACATATAGC------TTCCAAAGATCTAAAGGATCGTTAGG 38310144
>seq34656
Length=1692
Score = 145 bits (160), Expect = 1e-32
Identities = 111/130 (85%), Gaps = 1/130 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | |||||||||| | | || |||||||||||| ||||||||||||||||||
Sbjct 1251 TACTAGGTTGAATTACCATCGCGAT-ACTGTCATCAGTAGGTTAAAACTAACCTGTCTCA 1309
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||| ||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||
Sbjct 1310 CGACAGTCTAAACCCAGCTCACGTTCCCAATTGGTGGGTGAACAATCCAACACTTGGTGA 1369
Query 121 ATTCTGCTTC 130
|||||| |||
Sbjct 1370 ATTCTGTTTC 1379
>seq1
Length=34941034
Score = 131 bits (144), Expect = 3e-28
Identities = 98/115 (85%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
|||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||| |
Sbjct 2410946 ATGAACGCTTGGCTATCACAAGTCAGTTATCCCCGTGGTAACTTTTCTGACACCTCTAAC 2411005
Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||||||| | | || ||||||||||| ||||||| |||||| | || ||||||
Sbjct 2411006 TTCAAATTCCAAAGGTCTAAAGGATCGTTAGGCCATGCTTTCACGATTCGTATTC 2411060
Score = 107 bits (118), Expect = 3e-21
Identities = 176/248 (71%), Gaps = 22/248 (9%)
Strand=Plus/Plus
Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||| ||||||| | | | |||||||||||||||| ||||| | ||||| || |||
Sbjct 34038108 GAATCACCATTGCAACAATG-TCATCAGTAGGGTAAA-CTAACTTCTCTCACCACTATCT 34038165
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGT-----GAACAATCCAACGCTTACCGAATTC 124
|||||| | ||| || | |||| |||||| ||| | ||||| | |||||
Sbjct 34038166 CAACCCACCACACATTGCATATTGGTGGGTCAGATGAATAGGCCAACACGGGT-GAATTT 34038224
Query 125 TGC--------TTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCG 176
| | || | ||||||||||||| |||| |||||||| ||||||| || |
Sbjct 34038225 TTCCATACAAATTTACAACGATAGGAAGAGCCAACATTCAAGGATCACAAAGCAATGTTG 34038284
Query 177 CTATGA---AC-GC--TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCA 230
| ||| || || |||| ||||||||| ||||||||||||| ||| | ||| | ||
Sbjct 34038285 CCATGCGTGACTGCATTTGGATGCCACAAGGTAGTTATCCCTGTGATAAATATTCCGACA 34038344
Query 231 CCTCTAGC 238
||||||||
Sbjct 34038345 CCTCTAGC 34038352
>seq3069
Length=967
Score = 114 bits (126), Expect = 2e-23
Identities = 86/100 (86%), Gaps = 1/100 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | |||||||||| | | || |||||||||||||||||||||||||||||||
Sbjct 99 TACTAGGTTGAATTACCATCGCGAT-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 41
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTG 100
||||||||||||||| ||||||||||||| | || ||||
Sbjct 40 CGACGGTCTAAACCCAACTCACGTTCCCTACTGGTTGGTG 1
>seq808
Length=9131
Score = 113 bits (124), Expect = 8e-23
Identities = 70/75 (93%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 107 ATCAGTAGGATAAAACTAACCTGTCTCGCGACGGTCTAAACCCAGCTCACGTTCCCTGTT 48
Query 93 AGTGGGTGAACAATC 107
||| |||||||||||
Sbjct 47 AGTAGGTGAACAATC 33
>seq36990
Length=1260
Score = 109 bits (120), Expect = 9e-22
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | |||||||||| | | | || |||||||||||||||||||||||||||||||
Sbjct 84 TACTAGGTTGAATTACCATCGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 26
Query 61 TGACGGTCTAAACCCAGCTCACGTT 85
||||||||||||||||||||||||
Sbjct 25 CGACGGTCTAAACCCAGCTCACGTT 1
>seq2
Length=1523057
Score = 100 bits (110), Expect = 5e-19
Identities = 74/85 (87%), Gaps = 1/85 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | |||||||||| | | || |||||||||||||||||||||||||||||||
Sbjct 1247091 TACTAGGTTGAATTACCATCGCGAT-ACCGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1247033
Query 61 TGACGGTCTAAACCCAGCTCACGTT 85
|||||||||||| |||||||||||
Sbjct 1247032 CGACGGTCTAAACTCAGCTCACGTT 1247008
>seq7668
Length=845
Score = 89.7 bits (98), Expect = 9e-16
Identities = 124/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 51 ACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAA 110
|||||||||| |||||||| |||||||||||||| || || | || ||||| | ||
Sbjct 511 ACCTGTCTCACGACGGTCTGAACCCAGCTCACGTACCACTTTCATTGGCGAACAGCCAAA 452
Query 111 CGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCA 170
| ||| |||| | | | ||| || ||||||||||||| | |||| ||
Sbjct 451 CCCTTGGGAGCTTCTCCACCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACCGCT 392
Query 171 ACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
|| ||||||| ||||| || || | ||||| |||||||| | ||| |||||
Sbjct 391 CCGCCGCTATGGACGCTCGGGAGCGATAAGCCTGTTATCCCCGGAGTACCTTTT 338
>seq18390
Length=654
Score = 87.8 bits (96), Expect = 3e-15
Identities = 127/178 (71%), Gaps = 1/178 (1%)
Strand=Plus/Minus
Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106
|| ||||||||||| |||||| |||||||||||||||| || ||| | || |||||
Sbjct 479 ACCAACCTGTCTCACGACGGTTTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGC 420
Query 107 CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAA 166
| ||| ||| |||| | | | ||| || ||||||||||||| | ||||
Sbjct 419 CGAACCCTTGGGAGCTTCTTCACCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAAC 360
Query 167 AGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
|| || ||||||| ||||| || || | ||||| |||||||| ||| |||||
Sbjct 359 CGCTTCGCCGCTATGGACGCTCGG-AGCGATAAGCCTGTTATCCCCAGAGTACCTTTT 303
>seq18567
Length=655
Score = 78.8 bits (86), Expect = 2e-12
Identities = 123/175 (70%), Gaps = 6/175 (3%)
Strand=Plus/Minus
Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112
|||||||| |||| |||||||||||||| ||| || ||| |||| ||||| |||||
Sbjct 199 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTGCCGCTTTAATGGGCGAACAGCCCAACC 140
Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169
||| ||| | | | || | | ||| || ||||||||||||| | ||||
Sbjct 139 CTTGGGACCTACTCCAGCCCC---AGGATGCGACGAGCCGACATCGAGGTGCCAAACCAT 83
Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
||||| |||| || ||||| | |||| |||||||| | |||| |||||
Sbjct 82 CCCGTCGATATGGACTCTTGGGGAAGATCAGCCTGTTATCCCCGGGGTACCTTTT 28
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854056138176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |