Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq12085 159 1e-36 >seq12085 Length=746 Score = 159 bits (176), Expect = 1e-36 Identities = 198/269 (74%), Gaps = 4/269 (1%) Strand=Plus/Minus Query 284 AGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGC 343 ||||| || |||||||||| ||||| || ||| |||| || ||| |||||||| || ||| Sbjct 746 AGGATCTTCTCCAGCCAGCCGATGGAGTGGATATCCAGGTTGTTTGTCGGTTCATCCAGC 687 Query 344 AACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTTCCAGCCC 403 | |||||| || || | ||||||||||||||| ||||||| || ||||||||||||||| Sbjct 686 AGCAGCACGTCGGGTTTGGAAAACAGCGCCTGCGCCAGCAGCACGCGCAGCTTCCAGCCC 627 Query 404 GGGGACACTTCGCTCATCGGACCGAAGTG--CTGCTCCAGCGGAATACCCAGACCCAGCA 461 || | ||||||| |||||||||| ||| | | || || ||| ||| || Sbjct 626 GGCGCGACTTCGCGCATCGGACCGTTGTGAAAGGATTGTTCG--ATGCCCGCACCGGCCA 569 Query 462 GCAGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTTTCCA 521 | | || |||| || | |||||| |||||||| | ||||||||||| | || | Sbjct 568 GGATGTCCGCGGCGCGCGCCTCGGCGTTGTAGCCGCCGTACTCGGCGAACTTCGCCTCGA 509 Query 522 GCTCGGCCACGGCCATGCCGTCTTCTTCG 550 |||| || || |||| ||| || ||| Sbjct 508 GCTCCGCGGCGCGCATGTAGTCCTCGTCG 480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1880819066616