Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20
2015-07-07] 40,246 sequences; 566,550,431 total letters
Query= AAMG01001188.1
Length=621
Score E
Sequences producing significant alignments: (Bits) Value
seq12085 159 1e-36
>seq12085
Length=746
Score = 159 bits (176), Expect = 1e-36
Identities = 198/269 (74%), Gaps = 4/269 (1%)
Strand=Plus/Minus
Query 284 AGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGC 343
||||| || |||||||||| ||||| || ||| |||| || ||| |||||||| || |||
Sbjct 746 AGGATCTTCTCCAGCCAGCCGATGGAGTGGATATCCAGGTTGTTTGTCGGTTCATCCAGC 687
Query 344 AACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTTCCAGCCC 403
| |||||| || || | ||||||||||||||| ||||||| || |||||||||||||||
Sbjct 686 AGCAGCACGTCGGGTTTGGAAAACAGCGCCTGCGCCAGCAGCACGCGCAGCTTCCAGCCC 627
Query 404 GGGGACACTTCGCTCATCGGACCGAAGTG--CTGCTCCAGCGGAATACCCAGACCCAGCA 461
|| | ||||||| |||||||||| ||| | | || || ||| ||| ||
Sbjct 626 GGCGCGACTTCGCGCATCGGACCGTTGTGAAAGGATTGTTCG--ATGCCCGCACCGGCCA 569
Query 462 GCAGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTTTCCA 521
| | || |||| || | |||||| |||||||| | ||||||||||| | || |
Sbjct 568 GGATGTCCGCGGCGCGCGCCTCGGCGTTGTAGCCGCCGTACTCGGCGAACTTCGCCTCGA 509
Query 522 GCTCGGCCACGGCCATGCCGTCTTCTTCG 550
|||| || || |||| ||| || |||
Sbjct 508 GCTCCGCGGCGCGCATGTAGTCCTCGTCG 480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1880819066616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |