Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20
2015-07-07] 40,246 sequences; 566,550,431 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq1036 93.3 3e-17
seq103 75.2 7e-12
seq808 71.6 8e-11
seq22 71.6 8e-11
>seq1036
Length=7046
Score = 93.3 bits (102), Expect = 3e-17
Identities = 69/77 (90%), Gaps = 3/77 (4%)
Strand=Plus/Plus
Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107
||||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 2388 TCTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 2445
Query 108 GTAATACAACGCAAGCT 124
||||| |||||| ||||
Sbjct 2446 GTAAT-CAACGCGAGCT 2461
>seq103
Length=1049538
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Minus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 762447 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 762390
Query 122 GCT 124
|||
Sbjct 762389 GCT 762387
>seq808
Length=9131
Score = 71.6 bits (78), Expect = 8e-11
Identities = 46/49 (94%), Gaps = 1/49 (2%)
Strand=Plus/Minus
Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAAT 112
|| ||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 6356 CAATCGGTAG-AAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT 6309
>seq22
Length=40393389
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | |||||| |||| |||||||||||||||||||||| | |||||| |
Sbjct 33416076 TTCAATCGGTAGGA-GCGACGCGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 33416133
Query 122 GCT 124
|||
Sbjct 33416134 GCT 33416136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300686506280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |