Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20
2015-07-07] 40,246 sequences; 566,550,431 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq14921 205 2e-50
seq34962 190 4e-46
seq24564 190 4e-46
seq34591 168 1e-39
seq20801 141 2e-31
seq40246 136 8e-30
seq32520 136 8e-30
seq39058 131 3e-28
seq4536 127 4e-27
seq22 116 7e-24
seq29765 113 9e-23
seq24870 109 1e-21
seq14099 104 5e-20
seq127 93.3 8e-17
seq6402 89.7 1e-15
seq145 78.8 2e-12
>seq14921
Length=713
Score = 205 bits (226), Expect = 2e-50
Identities = 229/304 (75%), Gaps = 3/304 (1%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | |||| |||||| || | |||||||| |||||| |||||||||||||||||||||
Sbjct 20 GGCATGGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 79
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||||| |||||||||||| ||| |||||| | ||| |||||||| || ||||| |||
Sbjct 80 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACGGAT 139
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
||||| |||||||||| |||| | | ||||||| |||||| | | || ||||||
Sbjct 140 CGTCGCCTTGGTGGGCCATTACCCCGCCAACTAGCTAATCCGACATCGGCTCATCTTATC 199
Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240
||| | |||| | | | | || || | ||||||||||||||||
Sbjct 200 GCGCGAGGTCTT--GCGATCCCCCGCTTTCACCCGTAGGTCGTATGCGGTATTAGCGTAA 257
Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300
|||||| ||||||| || | | ||||||| || | | || || |||||||||||||
Sbjct 258 GTTTCCCTACGTTATCCCCCACGATAAGGCAGATT-CCGATGTATTCCTCACCCGTCCGC 316
Query 301 CACT 304
||||
Sbjct 317 CACT 320
>seq34962
Length=1006
Score = 190 bits (210), Expect = 4e-46
Identities = 138/160 (86%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | |||| |||||| || | |||||||| ||| || |||||||||||||||||||||
Sbjct 621 GGCATTGCTGGATCAGGCTTGCGCCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAG 680
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||||||||||||||||||| |||||| | || |||||||| || ||||| |||
Sbjct 681 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAGCTACAGAT 740
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160
||||||||||||| || ||| | ||||||||||||||||
Sbjct 741 CGTCGGCTTGGTGAGCCTTTACCCCACCAACTACCTAATC 780
>seq24564
Length=585
Score = 190 bits (210), Expect = 4e-46
Identities = 147/175 (84%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | |||| |||||| || | |||||||| |||||| |||||||||||||||||||||
Sbjct 411 GGCATGGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 470
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||| ||||||||||||||||||||||||||| | ||| |||||||| || |||| |||
Sbjct 471 GAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATCCTCTCAGACCAGCTATGGAT 530
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
||||| |||||| ||| ||| | ||||||||| |||||| |||| || ||||
Sbjct 531 CGTCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATCCAACGCGGGCTCATC 585
>seq34591
Length=1716
Score = 168 bits (186), Expect = 1e-39
Identities = 221/304 (73%), Gaps = 18/304 (6%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||||| ||| ||||||| |||| ||||||| | || || ||||||| ||||||||| |||
Sbjct 996 GGCGTTGCTCCATCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTACTGCCTCCCATAG 1055
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||| ||||||||||||||| | |||||| | | | ||||| | || ||||| ||
Sbjct 1056 GAGTCTTGGCCGTGTCTCAGTCATAGTGTGGCTGATTATCCTCTGGGACCAGCTACTAAT 1115
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
| ||| |||||| || | | ||||| || || |||||| | |||||||| || | |
Sbjct 1116 CATCGCCTTGGTAAGCCACTGCCTCACTAAGTAGCTAATCAGATGCGAGCCCCTCCTCGA 1175
Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239
|| ||| || || ||| | ||| | | || | |||||||||
Sbjct 1176 GCAGATTCCTCCTT------------TTGC--TTCTCAGCC--TACGGGGTATTAGCAGC 1219
Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299
|||||||| ||| |||| ||| || |||||||| || ||| ||||||||||||||||
Sbjct 1220 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 1278
Query 300 CCAC 303
||||
Sbjct 1279 CCAC 1282
>seq20801
Length=610
Score = 141 bits (156), Expect = 2e-31
Identities = 148/193 (77%), Gaps = 1/193 (1%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||||| |||| |||| || | |||||| |||||| ||| |||||||||||||||||
Sbjct 238 GGCGTGGCTGGGTCAGACTT-CGTCCATTGCCCAATATTCCCTACTGCTGCCTCCCGTAG 180
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||||| |||| ||||||| ||| ||||| | | |||||||| | ||| |||
Sbjct 179 GAGTCTGGCCCGTATCTCAGTGCCAGTGTGGGGGATTCTCCTCTCAGAGCCCCTAAAGAT 120
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
||| | ||||||| || ||| ||| ||||||| |||||| ||| |||||||| |
Sbjct 119 CGTAGACTTGGTGAGCCGTTACCTCGCCAACTATCTAATCTTACGCATGCCCATCTCTAT 60
Query 181 GCGATAAATCTTT 193
||||||||||||
Sbjct 59 CCGATAAATCTTT 47
>seq40246
Length=368801
Score = 136 bits (150), Expect = 8e-30
Identities = 122/153 (80%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
|||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| ||||||
Sbjct 311061 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 311120
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
||||||||||||||||||| |||||| | ||| || || || |||| ||| | ||
Sbjct 311121 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 311180
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159
|||||| || ||| || ||||||||||||||
Sbjct 311181 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 311213
>seq32520
Length=505
Score = 136 bits (150), Expect = 8e-30
Identities = 99/115 (86%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | |||| |||||| || | |||||||| |||||| |||||||||||||||||||||
Sbjct 391 GGCATGGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 450
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTA 115
|||||||| |||||||||||| ||| |||||| | ||| |||||||| || ||||
Sbjct 451 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGACCAGCTA 505
>seq39058
Length=1081
Score = 131 bits (144), Expect = 3e-28
Identities = 160/219 (73%), Gaps = 17/219 (8%)
Strand=Plus/Minus
Query 87 TGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCA 146
|||||| | ||| |||||||| || |||| ||||||||||||||| ||| |||| | ||
Sbjct 1081 TGTGGCTGATCATCCTCTCAGACCAGCTAAGGATCGTCGGCTTGGTAGGCCATTACCCCA 1022
Query 147 CCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTTTGGTCAAAGAATGA 206
|||||||||||||| |||| || |||| | ||||||||||||||||| |||
Sbjct 1021 CCAACTACCTAATCCTACGCGGGCTCATCCCTGGGCGATAAATCTTTGGTC--CGAA--- 967
Query 207 TGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAA 266
||||| || |||||||||| | |||| | |||||||| | ||
Sbjct 966 -----------GACATCATCCGGTATTAGCAGTAATTTCTCACTGTTATTCCGAACCCAA 918
Query 267 AGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTA 305
||||| || | |||| ||||| ||||||| ||||||||
Sbjct 917 GGGCAGATT-CCCACGCGTTACGCACCCGTGCGCCACTA 880
>seq4536
Length=917
Score = 127 bits (140), Expect = 4e-27
Identities = 123/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 2 GCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGG 61
||||||| | ||||| |||| ||||||| | | || | | ||||| ||||||||||||
Sbjct 248 GCGTCGCATCGTCAGGCTTTCGCCCATTGCGGATGATTCTCGACTGCAGCCTCCCGTAGG 189
Query 62 AGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATC 121
||||||||| |||||||||||||| ||| | || |||| |||||| ||| ||| ||
Sbjct 188 AGTCTGGGCAGTGTCTCAGTCCCAGTGTTGGCGGTCAATCTCTCAACCCGCCTAGACGTC 129
Query 122 GTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAAT 159
| | ||||||| || |||| ||||||||| | || ||
Sbjct 128 TTAGCCTTGGTGAGCCATTACCTCACCAACAAGCTGAT 91
>seq22
Length=40393389
Score = 116 bits (128), Expect = 7e-24
Identities = 81/92 (88%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| |||| ||||||| | || || |||||||||||||||||||||
Sbjct 18492670 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 18492729
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGC 92
||||||||||||||||||||||||| ||||||
Sbjct 18492730 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGC 18492761
>seq29765
Length=533
Score = 113 bits (124), Expect = 9e-23
Identities = 135/184 (73%), Gaps = 17/184 (9%)
Strand=Plus/Minus
Query 125 GGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGA 184
|||||||| ||| |||| | |||||||||||||||| |||| || |||| || ||||
Sbjct 533 GGCTTGGTAGGCCATTACCCCACCAACTACCTAATCTTACGCGGGCTCATCCTTGGGCGA 474
Query 185 TAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTT 244
||||||||||||| ||| ||||| || |||||||||| || |||
Sbjct 473 TAAATCTTTGGTC--CGAA--------------GACATCATCCGGTATTAGCAGTCATTT 430
Query 245 CCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304
| || |||||||| | || ||||| || | |||| ||||| ||||||| |||||||
Sbjct 429 CTAACTGTTATTCCGAACCCAAGGGCAGATT-CCCACGCGTTACGCACCCGTGCGCCACT 371
Query 305 AAGC 308
||||
Sbjct 370 AAGC 367
>seq24870
Length=579
Score = 109 bits (120), Expect = 1e-21
Identities = 133/182 (73%), Gaps = 17/182 (9%)
Strand=Plus/Minus
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186
|||||||||| |||| | ||||||||| |||||| |||| || |||| || ||||||
Sbjct 577 CTTGGTGGGCCATTACCCCACCAACTAGCTAATCTTACGCGGGCTCATCCTTGGGCGATA 518
Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCC 246
||||||||||| ||| ||||| || |||||||||| || ||||
Sbjct 517 AATCTTTGGTC--CGAA--------------GACATCATCCGGTATTAGCAGTCATTTCT 474
Query 247 AAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTAA 306
|| |||||||| | || ||||| || | |||| ||||| ||||||| |||||||||
Sbjct 473 AACTGTTATTCCGAACCCAAGGGCAGATT-CCCACGCGTTACGCACCCGTGCGCCACTAA 415
Query 307 GC 308
||
Sbjct 414 GC 413
>seq14099
Length=708
Score = 104 bits (114), Expect = 5e-20
Identities = 140/190 (74%), Gaps = 19/190 (10%)
Strand=Plus/Minus
Query 118 GATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTT 177
|||||||| |||||| ||| ||| | ||||||||| |||||| | |||| |||| |||
Sbjct 708 GATCGTCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATCAGACGCGGGCCCCTCTC 649
Query 178 TCAGCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCG 237
||| |||| |||| | ||| | || |||| |||| ||||||
Sbjct 648 ATGGCG-TAAA-CTTTCCCCC--GAAGG--GC---------ACATC---CGGTGTTAGCG 607
Query 238 TTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTC 297
| ||||||||||||||||||| | |||||||||| | ||||||||||||||||||
Sbjct 606 TCCGTTTCCAAACGTTATTCCGAACCATAAGGCAGGTT-CCCACGTGTTACTCACCCGTG 548
Query 298 CGCCACTAAG 307
||||||||||
Sbjct 547 CGCCACTAAG 538
>seq127
Length=60962716
Score = 93.3 bits (102), Expect = 8e-17
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 9 TGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGG 68
|| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| ||
Sbjct 15335468 TGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGG 15335409
Query 69 GCCGTGTCTCAGTCCCAATGT 89
| ||||||||||||||| |||
Sbjct 15335408 GTCGTGTCTCAGTCCCAGTGT 15335388
>seq6402
Length=874
Score = 89.7 bits (98), Expect = 1e-15
Identities = 159/228 (70%), Gaps = 17/228 (7%)
Strand=Plus/Plus
Query 92 CCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAAC 151
||| || | |||||| |||||||||| || | | |||||||||| ||| |||||||||
Sbjct 1 CCGGTCGATCTCTCAATCCGGCTACCCGTCTTAGCCTTGGTGGGCCGTTACCTCACCAAC 60
Query 152 TACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTT-TGGTCAAAGA----ATGA 206
|| || || |||||||| | | ||| ||||| ||| |||| || | |
Sbjct 61 TAGCTGATAGGCCGCGAACTCCTCTCCCAGCGTCGGGCCTTGCGGTCCCCGACTTTAGTA 120
Query 207 TGCCATCC--TCTGACAT------TATGCGGTATTAGCGTTCG--TTTCCAAACGTTATT 256
|| ||||| ||||| |||||||||||| |||| |||| | ||||
Sbjct 121 TGACATCCAGGAGGACATCAACCATATGCGGTATTA--ATTCGCCTTTCGGCGAGCTATT 178
Query 257 CCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304
|| | || | ||| || ||| ||||||||||| ||||||| |||||||
Sbjct 179 CCCCACTAAGAGGTAGATTGTTCACGTGTTACGCACCCGTTCGCCACT 226
>seq145
Length=44152522
Score = 78.8 bits (86), Expect = 2e-12
Identities = 55/63 (87%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| | ||||| |||| ||||||| | || || |||||||||||||||||||||||||||
Sbjct 19678122 GCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCT 19678181
Query 67 GGG 69
|||
Sbjct 19678182 GGG 19678184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 997998183936
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