Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20
2015-07-07] 40,246 sequences; 566,550,431 total letters
Query= AAMG01001688.1
Length=394
Score E
Sequences producing significant alignments: (Bits) Value
seq38530 163 7e-38
>seq38530
Length=1102
Score = 163 bits (180), Expect = 7e-38
Identities = 176/229 (77%), Gaps = 3/229 (1%)
Strand=Plus/Minus
Query 167 CTTGACCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTC 226
||| ||| |||||||||||||||||| | | ||| || || ||||| |||| |||||
Sbjct 1010 CTTCACCACCTTGCGGCAGATCTTCGACACTTCGCGTTCGAGCGCACGC-CACCCGCTTC 952
Query 227 GCGGGTGTAGTAGCGGACGATGTCGCGGATCGTGCCGACT-TCAAATTCGATCTCGCCCT 285
|||||||||||||| ||||||||||| |||| | | ||| | | || ||| ||
Sbjct 951 ACGGGTGTAGTAGCGCACGATGTCGCGAATCGCATCTTCGGTCACAGT-GACTTCGGTCT 893
Query 286 TCTTCAGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCT 345
|||||||||| ||| | |||||||| || || || |||||| || |||| ||
Sbjct 892 TCTTCAGGCCGTTGTTCTTCATCTGCTTTGGTAGCAGATAACGGATGGCAATATTGACCT 833
Query 346 TCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394
||||||||||||||||||| | |||||||||||||||||| || || ||
Sbjct 832 TCTCGTCTTCGGTGTAACCAGACAGGCGAATCACTTCCATACGATCAAG 784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1157933790336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |