Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq31651 132 8e-29 >seq31651 Length=511 Score = 132 bits (146), Expect = 8e-29 Identities = 123/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 139 TTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCA 198 ||||||||||| || || || || ||||||||||| |||||||| || ||||| || || Sbjct 297 TTCATGCGTTTCTTGCCTGCTTTCTGCTTCTCAAGAAGCTTGCGTTTGCGGCTGACATCG 356 Query 199 CCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATG 258 |||||||| ||||| ||||| |||||||| | | ||||||| || ||||||||| Sbjct 357 CCGCCGTAACATTTTGCCAGCACGTTCTTGCGCAACGCCTTGATGGTCTCGCGCGCAATG 416 Query 259 ATCTGCCCGCCAATGGCGGCCTGGATCGCGACGTCG 294 || | |||| ||||| |||||||| || |||||| Sbjct 417 ATGTTGGCGCCGATGGCCGCCTGGATGGCCACGTCG 452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838062577536