Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20
2015-07-07] 40,246 sequences; 566,550,431 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq344 614 2e-173
seq1868 484 2e-134
seq34927 452 1e-124
seq103 448 2e-123
seq33746 367 4e-99
seq1433 304 4e-80
seq11185 279 2e-72
seq26561 239 1e-60
seq1486 179 1e-42
seq187 138 4e-30
seq97 138 4e-30
seq28153 131 5e-28
seq43 100 9e-19
seq34656 98.7 3e-18
seq1 80.6 9e-13
seq40246 75.2 4e-11
seq2729 75.2 4e-11
>seq344
Length=88605
Score = 614 bits (680), Expect = 2e-173
Identities = 454/531 (85%), Gaps = 34/531 (6%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| || || || ||||| ||||||||| |||| | |||||||||||||||||||
Sbjct 6741 CTTCTGTTCCACGCGAGATATCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 6682
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||
Sbjct 6681 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACATGACAATGTCCTCCTCCCGGATC 6622
Query 127 GGCCCGCGAAG--GACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATT 184
||||||| ||| ||||||| |||| |||| | ||
Sbjct 6621 GGCCCGCAAAGCGGACCTTA------------GGTCTAAAAAGAG--GGTC--------- 6585
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244
||| ||| |||| ||| ||| ||||||||||||||||||||| |||||||||
Sbjct 6584 ---TAA---AAATAACGTTAAAAGTACTGGTATTTCACTTGCGCCGAA---GCTCCCACT 6534
Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 6533 TATCCTACACCTCTCAAGTCATTTCATAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 6474
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||
Sbjct 6473 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGAAAGTAGA 6414
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 6413 CAGGGACAGTGGGAATCTCGTTAATCAATTCATGCGCGTCACTAATTAGATGACGAGGCA 6354
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6353 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 6294
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||||||| | ||||||||||||||||||| | || ||| ||
Sbjct 6293 CTTCACTTTGACATTCAAAACACTGGGCAGAAATCACATAGTGTTAACCTC 6243
Score = 524 bits (580), Expect = 2e-146
Identities = 327/351 (93%), Gaps = 3/351 (1%)
Strand=Plus/Minus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244
|| ||||||||| |||| ||| ||||||||||||||||||||||||| |||||||||
Sbjct 26245 GAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGAA---GCTCCCACT 26189
Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
||| ||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 26188 TATCCTACATCTCTCAAGTCATTTCAAAAAGTCGGACTAGAGTCAAGCTCAACTGGGTCT 26129
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||||||||| | ||| |||||||||||||||||||||||||| |||||||||
Sbjct 26128 TCTTTCCCCGCTGATTCTGGCAAACCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGA 26069
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 26068 CAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 26009
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 26008 TTTGGCTACCTTAAGAGAGTCATAGTTACTCTCGCCGTTTACTCGCGCTTGGTTGAATTT 25949
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||| |||||||||||||||||||||||||| | ||| ||
Sbjct 25948 TTTCACTTTGACATTAAGAGCACTGGGCAGAAATCACATTGCATTAACCTC 25898
>seq1868
Length=3818
Score = 484 bits (536), Expect = 2e-134
Identities = 293/309 (95%), Gaps = 3/309 (1%)
Strand=Plus/Plus
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244
|| ||||||||| |||| ||| ||||||||||||||||||||||||| |||||||||
Sbjct 3513 GAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGAA---GCTCCCACT 3569
Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3570 TATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTTT 3629
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
|||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 3630 TCTTTCCCAGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGA 3689
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3690 AAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 3749
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3750 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGATTGAATTT 3809
Query 485 CTTCACTTT 493
|||| ||||
Sbjct 3810 CTTCTCTTT 3818
>seq34927
Length=1620
Score = 452 bits (500), Expect = 1e-124
Identities = 333/382 (87%), Gaps = 11/382 (3%)
Strand=Plus/Minus
Query 47 CTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGA 106
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 375 CTTAGGACACCTGCGTTATCTTTTAATAGATGTGCCGCCCCAGCCAAACTCCCCACCTGA 316
Query 107 CAATGTCATCAACCCGGATCGGCCCGCGAAG--GACCTTAACGCCAGAAA-ATGGTCGGT 163
|||| || || ||||||| ||| ||| ||| ||||| | | | ||| | || | ||
Sbjct 315 CAATATCCTCCGCCCGGATTGGCTCGCAAAGCGGACCTAAGGTCTAAAAAGAGGGGCAGT 256
Query 164 GAAGACCAG-TTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC 222
| || | ||||| |||| | ||||||||| | || ||| || |||||||||||
Sbjct 255 GC---CCGGCTTCCGACTCATGTAGTAAGTAAAATA-CGTTAAAAATACTGGTATTTCAC 200
Query 223 TTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACT 282
|||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct 199 TTGCGCCGAA---GCTCCCACTTATCCTACGCCTCTCAAGTCATTTCACAAAGTCGGACT 143
Query 283 AGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGC 342
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 142 AGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGA 83
Query 343 TGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCG 402
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 82 TGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCG 23
Query 403 TCACTAATTAGATGACGAGGCA 424
||||||||||||||||||||||
Sbjct 22 TCACTAATTAGATGACGAGGCA 1
>seq103
Length=1049538
Score = 448 bits (496), Expect = 2e-123
Identities = 268/281 (95%), Gaps = 0/281 (0%)
Strand=Plus/Minus
Query 255 CTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG 314
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 734407 CTCTCAAGTCATTTCACAAAGTCGGACTAGAGTTAAGCTCAACAGGGTCTTCTTTTCCCC 734348
Query 315 CTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGT 374
|| |||| ||||||| |||||||||||||||||||||||| ||||||||| |||||||||
Sbjct 734347 CTAATTCTGCCAAGCACGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGT 734288
Query 375 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 734287 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 734228
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 734227 GTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCACGCTTGGTTGAATTTCTTCACTTTG 734168
Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||| ||||| ||||||||| ||||||
Sbjct 734167 ACATTCAGAGCACTGGGCGGAAATTACATTGCGTTAACATC 734127
Score = 91.5 bits (100), Expect = 5e-16
Identities = 77/93 (83%), Gaps = 5/93 (5%)
Strand=Plus/Minus
Query 173 TTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTA--GTGGTATTTCACTTGCGCCG 230
||||| ||| || ||||||||| |||| ||| ||| ||||||||||||||||||||
Sbjct 735125 TTCCGACTCACGGAATAAGTAAAATAACGTTAAAAGTATAGTGGTATTTCACTTGCGCCG 735066
Query 231 AAACGGCTCCCACTTATTCTACACCTCTCAAGT 263
|| |||| ||||||| |||||||||||||||
Sbjct 735065 AA---GCTCGCACTTATCCTACACCTCTCAAGT 735036
Score = 86.0 bits (94), Expect = 2e-14
Identities = 50/52 (96%), Gaps = 0/52 (0%)
Strand=Plus/Minus
Query 61 GTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 112
||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735184 GTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 735133
>seq33746
Length=501
Score = 367 bits (406), Expect = 4e-99
Identities = 332/410 (81%), Gaps = 21/410 (5%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| || |||||| ||||||||||||||| |||| | ||||||||||||| |||||
Sbjct 404 CTTCTGTTCTACAAGAGATTTCTGTTCTCTTTGAGCTCATCTTAGGACACCTGTGTTATC 345
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||| |||||| | | ||
Sbjct 344 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAGTGTCATGGTCGAGCGTC 285
Query 127 GGCCCGCGAA--------GGACCTTAACGCCAGAAAATG--GTCGGTGAAGACCAGTTCC 176
| || || | |||| |||| |||||| || | | || | | |||
Sbjct 284 GTCCAACGGAAACCCGTCGGAC-TTAAATCCAGAAT-TGACGACCTTGCGGCCGCCATCC 227
Query 177 GCTTC--ATTGATTAAGTaaaaaaaCGATAAGG-GTAGTGGTATTTCACTTGCGCCGAAA 233
||| | ||||||| ||| ||| || ||| |||||||||||||| || ||||
Sbjct 226 GCTATGAAACCATTAAGTCAAACAAC-ATCAGGAGTAGTGGTATTTCAT---CGACGAAT 171
Query 234 CGG--CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAG 291
| ||||||||||| ||||||||| |||||||| |||||| ||| |||||||||||||
Sbjct 170 TGCTTCTCCCACTTATGCTACACCTCCCAAGTCATCTCACAATGTCAGACTAGAGTCAAG 111
Query 292 CTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTC 351
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 110 CTCAACAGGGTCTTCTTTCCCCGCTGATACACCCAAGCCCGTTCCCTTGGCTGTGGTTTC 51
Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC 401
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 50 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC 1
>seq1433
Length=3754
Score = 304 bits (336), Expect = 4e-80
Identities = 219/251 (87%), Gaps = 5/251 (2%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3507 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 3566
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||
Sbjct 3567 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTCCGACCCGGGTC 3626
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
|||||||||||||||||||| | |||| ||| || ||| |||| ||||| || |
Sbjct 3627 GGCCCGCGAAGGACCTTAACACTAGAAGTTGGACG--TAAGTCCAGCCCCGCTCCACCGG 3684
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| || | |||||||||||||||| |||||||| |||||||| ||
Sbjct 3685 ATAAGTAAAAAAACAATGGGAGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACCTA 3741
Query 247 TTCTACACCTC 257
|||||||||||
Sbjct 3742 TTCTACACCTC 3752
>seq11185
Length=774
Score = 279 bits (308), Expect = 2e-72
Identities = 159/162 (98%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 774 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATACACCCAAGCCCGTTCCCTT 715
Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 714 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 655
Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 441
||||||||||||||||||||||||||||||||||||||||||
Sbjct 654 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 613
>seq26561
Length=560
Score = 239 bits (264), Expect = 1e-60
Identities = 172/197 (87%), Gaps = 10/197 (5%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||| ||||||||||| | || | ||||||| || ||||||||||||||||||
Sbjct 193 CTCCCACCTATTCTACACCCATAAAAATAGTTCACAATATCAGACTAGAGTCAAGCTCAA 134
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||||||| | ||||||||||||||||||||||| | ||||||||
Sbjct 133 TAGGGTCTTCTTTCCCCGCTGACT--GCCAAGCCCGTTCCCTTGGCTGTTGGTTCGCTAG 76
Query 357 ATAGTAGA------TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 410
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AT--TAGACAAAAGTAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 18
Query 411 TAGATGACGAGGCATTT 427
|||||||||||||||||
Sbjct 17 TAGATGACGAGGCATTT 1
Score = 100 bits (110), Expect = 9e-19
Identities = 82/100 (82%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||| || ||| ||||||||||||| ||| | ||||||||||||| |||||
Sbjct 456 CTTTTATTCAACACAAGATTTCTGTTCTTGTCGAGCTCATCTTAGGACACCTGTGTTATT 397
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGA 106
||||||||||||||||||||||||||||||||| ||||
Sbjct 396 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCTTCTGA 357
>seq1486
Length=6015
Score = 179 bits (198), Expect = 1e-42
Identities = 164/203 (81%), Gaps = 7/203 (3%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| || || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 5813 CTTCTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 5872
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 5873 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCACCCGGATC 5932
Query 127 GGCCCGCGAA--GGACCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAG-TTCCGCTTCA 182
||||||| || |||||||| | | ||| | || | || | || | ||||| |||
Sbjct 5933 GGCCCGCAAAGCGGACCTTAGGTCTAAAAAGAGGGGCAGT---GCCCTGCTTCCGACTCA 5989
Query 183 TTGATTAAGTaaaaaaaCGATAA 205
|| ||||||||| |||| |||
Sbjct 5990 CGGAGTAAGTAAAATAACGTTAA 6012
>seq187
Length=45274173
Score = 138 bits (152), Expect = 4e-30
Identities = 161/219 (74%), Gaps = 14/219 (6%)
Strand=Plus/Minus
Query 209 TAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTT 268
||||| |||||||| || |||||| ||||| |||| ||||| | |||||| ||| |
Sbjct 1484087 TAGTGATATTTCACCAGCATCGAAAC---TCCCAGTTATCCTACATCACTCAAGCCATCT 1484031
Query 269 CACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAG 328
|||||||| |||||||||| |||| |||| | |||||| |||||
Sbjct 1484030 CACAAAGTG-----------AAGCTCAACAAGGTCACCTTTTTCTATTGATTCTACCAAG 1483982
Query 329 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 388
| | ||||||||||| | ||||| | ||| |||| ||| | |||| ||||||||||||
Sbjct 1483981 CACATTCCCTTGGCTTTAGTTTCCCCAGACAGTATATAAAAATAGTGAGAATCTCGTTAA 1483922
Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTT 427
||||||||||| | | | ||| || |||| |||| |||
Sbjct 1483921 TCCATTCATGCACATAAGTAAAGAGGTGACAAGGCCTTT 1483883
Score = 91.5 bits (100), Expect = 5e-16
Identities = 72/85 (85%), Gaps = 1/85 (1%)
Strand=Plus/Minus
Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGT-TAATCCATTCATGCGCGTCACTAAT 410
||||||||||||| | | | | ||| || ||| |||||||||||||||||||||||||
Sbjct 7527838 GCTAGATAGTAGACAAGTATAATGGAGATTACGTCTAATCCATTCATGCGCGTCACTAAT 7527779
Query 411 TAGATGACGAGGCATTTGGCTACCT 435
||||||| || |||||||||||||
Sbjct 7527778 CAGATGACTAGTCATTTGGCTACCT 7527754
>seq97
Length=519377
Score = 138 bits (152), Expect = 4e-30
Identities = 115/137 (84%), Gaps = 4/137 (3%)
Strand=Plus/Minus
Query 11 TGCTCTACAGGAGATTTC-TGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTT 69
|| || ||| |||||||| ||||||| |||| | ||||||||||||||||||| ||
Sbjct 420642 TGTTCCACACGAGATTTCCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATATTT 420583
Query 70 TAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGC 129
||||||||||||| |||||||||||| |||| |||||||||||| || |||||||||||
Sbjct 420582 TAACAGATGTGCCTCCCCAGCCAAACACCCC-CCTGACAATGTCCTCCGCCCGGATCGGC 420524
Query 130 CCGCGAA--GGACCTTA 144
||| || ||||||||
Sbjct 420523 TCGCAAAGCGGACCTTA 420507
>seq28153
Length=552
Score = 131 bits (144), Expect = 5e-28
Identities = 95/109 (87%), Gaps = 2/109 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| |||||| ||||||||||||||| |||| || ||||||||||||| |||||
Sbjct 244 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCCTCTTAGGACACCTGTGTTATC 185
Query 67 G--TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 184 TCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATCTGACTATGTC 136
>seq43
Length=26577699
Score = 100 bits (110), Expect = 9e-19
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 212 TGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCAC 271
|||||||||||||||| |||| |||||||||||| ||||| ||||||| ||||||||
Sbjct 19715973 TGGTATTTCACTTGCGTCGAA---GCTCCCACTTATCCTACAACTCTCAACACATTTCAC 19716029
Query 272 AAAGTCGGACTAGAGT 287
||||||||||||||||
Sbjct 19716030 AAAGTCGGACTAGAGT 19716045
>seq34656
Length=1692
Score = 98.7 bits (108), Expect = 3e-18
Identities = 86/106 (81%), Gaps = 2/106 (2%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| || || ||| |||||| | ||||| || | ||||||||||||| |||||
Sbjct 1497 CTTCTGTTCCACACGAGATTAATATTCTCGTTGCT--CATCTTAGGACACCTGTGTTATC 1554
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 112
||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1555 TTTTCACAGATGTACCGCCCCAGCCAAACTCCCCACCTGACAATGT 1600
Score = 82.4 bits (90), Expect = 2e-13
Identities = 72/88 (82%), Gaps = 5/88 (6%)
Strand=Plus/Plus
Query 173 TTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTA--GTGGTATTTCACTTGCGCCG 230
||||| ||| || ||||||||| |||| ||| ||| ||||||||||||||||||||
Sbjct 1608 TTCCGACTCACGGAATAAGTAAAATAACGTTAAAAGTATAGTGGTATTTCACTTGCGCCG 1667
Query 231 AAACGGCTCCCACTTATTCTACACCTCT 258
|| |||| ||||||| ||||||||||
Sbjct 1668 AA---GCTCGCACTTATCCTACACCTCT 1692
>seq1
Length=34941034
Score = 80.6 bits (88), Expect = 9e-13
Identities = 58/67 (87%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 70 TAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGC 129
||||| |||||||||||||||||||||||| | |||| |||||| || ||| |||||||
Sbjct 2411144 TAACAAATGTGCCGCCCCAGCCAAACTCCCTAACTGATAATGTCCTCCGCCCTGATCGGC 2411203
Query 130 CCGCGAA 136
|||| ||
Sbjct 2411204 CCGCAAA 2411210
>seq40246
Length=368801
Score = 75.2 bits (82), Expect = 4e-11
Identities = 80/106 (75%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct 126551 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 126610
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||| || ||| | ||||||| ||||||||||| | ||||
Sbjct 126611 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACTGGGGCTT 126656
Score = 75.2 bits (82), Expect = 4e-11
Identities = 80/106 (75%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct 214654 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 214595
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||| || ||| | ||||||| ||||||||||| | ||||
Sbjct 214594 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACTGGGGCTT 214549
Score = 75.2 bits (82), Expect = 4e-11
Identities = 80/106 (75%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct 350627 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 350568
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||| || ||| | ||||||| ||||||||||| | ||||
Sbjct 350567 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACTGGGGCTT 350522
>seq2729
Length=971
Score = 75.2 bits (82), Expect = 4e-11
Identities = 80/106 (75%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||||||| | |||||| |||||| ||| ||| | ||| ||| ||| ||||
Sbjct 689 GACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 748
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||| || || |||||||| |||||||||||| | ||||
Sbjct 749 GCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTT 794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634541897408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |