Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20
2015-07-07] 40,246 sequences; 566,550,431 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1433 226 5e-57
seq31184 223 6e-56
seq34656 120 5e-25
seq36990 111 3e-22
seq34927 111 3e-22
seq24237 107 3e-21
seq3069 107 3e-21
seq1486 102 1e-19
seq344 102 1e-19
seq97 100 5e-19
seq43 96.9 6e-18
seq145 93.3 7e-17
seq66 91.5 2e-16
seq17505 86.0 1e-14
seq2 86.0 1e-14
>seq1433
Length=3754
Score = 226 bits (250), Expect = 5e-57
Identities = 223/279 (80%), Gaps = 7/279 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| ||||||||||||||||||||| |||| |||| |
Sbjct 3184 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCATT 3127
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||
Sbjct 3126 GCCGCGAAGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCA 3067
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||| | | || | |||| |||| | ||| ||| |||||||||||||||| |
Sbjct 3066 GAAAGCGACGACGC-CTCCCGCACGT-ATAGATGGACACGAATAGGCTTCGGCTTAGCGT 3009
Query 181 CTTAGCAGGCCGGCAACG-GGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|||||||||| | |||| || ||| ||||||| | | | | | || ||||||||
Sbjct 3008 CTTAGCAGGCAAGGAACGCCACGGCCC-AGGAAGCGGGCTGTGGT-ACCTTGCGGATTGT 2951
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| || | || ||| ||||| |||||||||||
Sbjct 2950 AATTTCAGCACGAGCGGGGTCGAATCCCTTGCAGACGAC 2912
>seq31184
Length=522
Score = 223 bits (246), Expect = 6e-56
Identities = 215/267 (81%), Gaps = 7/267 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 262 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 205
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||
Sbjct 204 GCCGCGAAGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCA 145
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||| | | || | |||| |||| | ||| ||| |||||||||||||||| |
Sbjct 144 GAAAGCGACGACGC-CTCCCGCACGT-ATAGATGGACACGAATAGGCTTCGGCTTAGCGT 87
Query 181 CTTAGCAGGCCGGCAACG-GGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|||||||||| || | || ||| ||| ||||||| | ||| | | || ||| ||||
Sbjct 86 CTTAGCAGGCAGGGACCGCCGCGGCCC-AGGAAGCGGGTTGCGGT-ACCTTGCGAATTGT 29
Query 240 AATTTCACCATGCGCAGGGATAAATCC 266
||||||| || | || ||| |||||
Sbjct 28 AATTTCAGCACGAGCGGGGTCGAATCC 2
>seq34656
Length=1692
Score = 120 bits (132), Expect = 5e-25
Identities = 102/123 (83%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | ||||||||| ||||| || ||| || ||||
Sbjct 1253 GTACGAGAGGAACCGTTGA-TTC-GCATAATTGGTAATTGCGCTTGGTTGAAAAGTCAGT 1196
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1195 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCTGTGCCA 1136
Query 121 GAA 123
|||
Sbjct 1135 GAA 1133
>seq36990
Length=1260
Score = 111 bits (122), Expect = 3e-22
Identities = 100/123 (81%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 82 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 139
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||||||||||| |||||||||||||||||||||||| ||||
Sbjct 140 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCCA 199
Query 121 GAA 123
|||
Sbjct 200 GAA 202
>seq34927
Length=1620
Score = 111 bits (122), Expect = 3e-22
Identities = 100/123 (81%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||| || || ||| | | ||||||| | ||| || |||| || ||||
Sbjct 608 GTACGAGAGGAATCGTTGA-TTC-GCACAATTGGTAATCGCGCTTGGCTGAAAAGCCAGT 665
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||||||||||| |||||||||||||||||||||||| ||||
Sbjct 666 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCCA 725
Query 121 GAA 123
|||
Sbjct 726 GAA 728
>seq24237
Length=590
Score = 107 bits (118), Expect = 3e-21
Identities = 99/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||||| || | || ||| || || |
Sbjct 549 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTTATGTGCTTGGTTGATAAGCCAAT 492
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||||||| |||||||| |||||||||||||||||||||||| |||
Sbjct 491 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCGTCCA 432
Query 121 GAA 123
|||
Sbjct 431 GAA 429
>seq3069
Length=967
Score = 107 bits (118), Expect = 3e-21
Identities = 99/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 97 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTAATCGCGCTTGGTTGAAAAGCCAGT 154
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| ||||||||||| | ||||||||||| |||||||||||||||||||||||| ||||
Sbjct 155 GGCGCGAAGCTACTGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCCA 214
Query 121 GAA 123
|||
Sbjct 215 GAA 217
>seq1486
Length=6015
Score = 102 bits (112), Expect = 1e-19
Identities = 98/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| || ||||||| | ||| || ||| || ||||
Sbjct 5490 GTACGAGAGGAACCGTTGA-TTCGCAA-AATTGGTAATCGCGCTTGGTTGAAAAGCCAGT 5433
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | | ||||||||| ||||||||||||||||||| |||| ||||
Sbjct 5432 GGCGCGAAGCTACCGTGCGGTGGATTATGACTGAACGCCTCTAAGTCAGGATCCGGGCCA 5373
Query 121 GAA 123
|||
Sbjct 5372 GAA 5370
>seq344
Length=88605
Score = 102 bits (112), Expect = 1e-19
Identities = 98/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||| || || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 26522 GTACGAGAGGAATCGTTGA-TTC-GCACAATTGGTAATCGCGCTTGGTTGAAAAGCCAGT 26579
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||||||||||| |||||||||||||||||||||||| ||||
Sbjct 26580 GGCGCGAAGCTACCTTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCCA 26639
Query 121 GAA 123
||
Sbjct 26640 AAA 26642
Score = 91.5 bits (100), Expect = 2e-16
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 29 AATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTAT 88
||||||| | ||| || ||| || ||||| |||||||||||| | ||||||| ||
Sbjct 7047 AATTGGTAATCGCGTTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATCAT 7106
Query 89 GGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123
| |||||||||||||||||||||||| |||||||
Sbjct 7107 GACTGAACGCCTCTAAGTCAGAATCCGGGCCAGAA 7141
>seq97
Length=519377
Score = 100 bits (110), Expect = 5e-19
Identities = 92/114 (81%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 420969 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTAATCGCGCTTGGTTGAAAAGCCAGT 421026
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||| | ||||||||||| |||||||||||||||| |||||||
Sbjct 421027 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTTAGAATCC 421080
Score = 82.4 bits (90), Expect = 1e-13
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||||| | |||||||||| | ||||||||| | |||||||||||||||||||||||
Sbjct 419250 AGCCAGTGGCTCGAAGCTACCGTGCGCTGGATTAGGACTGAACGCCTCTAAGTCAGAATC 419309
Query 114 CATGCCAGAA 123
| |||||||
Sbjct 419310 CGGGCCAGAA 419319
>seq43
Length=26577699
Score = 96.9 bits (106), Expect = 6e-18
Identities = 97/124 (78%), Gaps = 4/124 (3%)
Strand=Plus/Minus
Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTG 61
|| ||||||||||| || || | | ||||||| | ||| || ||| || |||||
Sbjct 10576902 TATGAGAGGAACCGTTGATTT--GCACAATTGGTAATCGCGCTTGGTTGAAAAGCCAGTG 10576845
Query 62 CCGCGAAGCTACCATCTGCTGGATTAT--GGCTGAACGCCTCTAAGTCAGAATCCATGCC 119
|||||||||||| | |||||||||| | |||||||||||||||||||||||| |||
Sbjct 10576844 GCGCGAAGCTACCGTGCGCTGGATTATATGACTGAACGCCTCTAAGTCAGAATCCGGGCC 10576785
Query 120 AGAA 123
||||
Sbjct 10576784 AGAA 10576781
Score = 78.8 bits (86), Expect = 2e-12
Identities = 57/66 (86%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 58 AGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG 117
|||| ||||| ||||| | |||||||||||| |||||||||||||||||||||| | |
Sbjct 4860597 AGTGGCGCGAGGCTACTGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATTCGGG 4860656
Query 118 CCAGAA 123
||||||
Sbjct 4860657 CCAGAA 4860662
>seq145
Length=44152522
Score = 93.3 bits (102), Expect = 7e-17
Identities = 96/123 (78%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||| |||| || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 6913925 GTACGAGAGGGACCGTTGA-TTC-GCACAATTGGTAATCGCGCTTGGTTGAAAAGCCAGT 6913868
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| | |||||||||||| | ||||||||| ||||| |||||||||||||||||| ||||
Sbjct 6913867 GGCACGAAGCTACCATGCGTTGGATTATGACTGAATGCCTCTAAGTCAGAATCCGGGCCA 6913808
Query 121 GAA 123
||
Sbjct 6913807 CAA 6913805
Score = 89.7 bits (98), Expect = 8e-16
Identities = 95/123 (77%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | |||| || | ||| || ||| | ||||
Sbjct 6741049 GTACGAGAGGAACCGTTGA-TTC-GCACAATTAGTAATCGCGCTTGGTTGAAAATCCAGT 6741106
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||| ||| | ||||||||||| ||||||| ||||||||||||||| ||||
Sbjct 6741107 GGCGCGAAGCCACCGTGCGCTGGATTATGACTGAACGATTCTAAGTCAGAATCCGGGCCA 6741166
Query 121 GAA 123
|||
Sbjct 6741167 GAA 6741169
>seq66
Length=1325581
Score = 91.5 bits (100), Expect = 2e-16
Identities = 95/122 (78%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTG 61
|||||||||||||| || ||| | | ||||||| ||||| || ||| || |||||
Sbjct 1067833 TACGAGAGGAACCGTTGA-TTC-GCACAATTGGTAGTTGCGCTTGGTTGAAAAGTCAGTG 1067890
Query 62 CCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAG 121
||||||||||||| | |||||||| ||||| || ||||| ||||||||| |||||
Sbjct 1067891 GTGCGAAGCTACCATGCGATGGATTATATCTGAATGCATCTAAATCAGAATCCGGGCCAG 1067950
Query 122 AA 123
||
Sbjct 1067951 AA 1067952
>seq17505
Length=671
Score = 86.0 bits (94), Expect = 1e-14
Identities = 102/133 (77%), Gaps = 4/133 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | ||| || |||||||| | ||| | |||| |||| |
Sbjct 439 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGAT 383
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| |
Sbjct 382 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 323
Query 121 -GAACGGGGTGAT 132
|| |||||| ||
Sbjct 322 GGAGCGGGGTCAT 310
>seq2
Length=1523057
Score = 86.0 bits (94), Expect = 1e-14
Identities = 95/123 (77%), Gaps = 3/123 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||| ||||||||| || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 1247089 GTACGGGAGGAACCGTTGA-TTC-GCACAATTGGTAATCGCGCTTGGTTGAAAAGCCAGT 1247146
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||||||||| |||||||||||| ||||||||| | ||||
Sbjct 1247147 GGCGCGAAGCTACCGTGCAATGGATTATGACTGAACGCCTCT-AGTCAGAATTCGGGCCA 1247205
Query 121 GAA 123
|||
Sbjct 1247206 GAA 1247208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 818880607744
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