Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq30224 149 2e-31 >seq30224 Length=530 Score = 149 bits (164), Expect = 2e-31 Identities = 242/346 (70%), Gaps = 8/346 (2%) Strand=Plus/Plus Query 37694 GGCGTCGAAAAAGAAGACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTC 37753 ||||| ||||| | ||||| || ||| ||| ||||||||||||||||||| ||| Sbjct 177 GGCGTGGAAAAGCACGACCGCACCGGCACCGGAACGCTGTCGGTGTTCGGCCATCAGACG 236 Query 37754 CGCTTCAACTTACAAGATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGC--- 37810 ||| ||| || | ||||| ||||| | || || || || || ||||| Sbjct 237 CGCCACAATTTGGCCGCAGGATTCCCGCTGCTCACGACCAAGAA---GC-TATCCCTCAA 292 Query 37811 -TCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCA 37869 || |||||| | |||||||| ||||| | | |||||||| ||| || ||| | | Sbjct 293 ATCGATCATTCACGAACTGCTCTGGTTCCTGAGGGGCGATACCAACATCAAGTATCTCAA 352 Query 37870 GGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGAT 37929 ||| | ||||| |||| ||||| ||||||||||| || || ||||| ||||| ||| | Sbjct 353 GGACCACGGCGTCTCGATCTGGGACGAGTGGGCGGATGAGAATGGCGACCTCGGTCCGGT 412 Query 37930 TTACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGC 37989 || || | || |||||||| ||| || | || || | |||||| |||||||| Sbjct 413 CTATGGTTCTCAGTGGCGCTCATGGCCGGCGCCGGATGGACGCAGCATCGATCAGATCGC 472 Query 37990 ATGGGTTGTCGAAGAGATCAAACGAAATCCGCATTCACGCCGGCTG 38035 || ||||| |||| ||| |||||| |||| || |||||| Sbjct 473 CAATGTCGTCGACATGATCCGACGCAATCCGGATTCGCGGCGGCTG 518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130577564367900