Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq127 86.0 5e-12 >seq127 Length=60962716 Score = 86.0 bits (94), Expect = 5e-12 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGC-CTTGGTCCTAAGATAGTACATGCCGG 65135 ||| || || || | ||| |||| |||||| || | || || ||| |||||||||||||| Sbjct 7117733 ATCCACTGTAAATTTGATAGCATCAGCAGCTGCTCGTGTTCTTAA-ATAGTACATGCCGG 7117791 Query 65136 TCTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCT 65195 |||| | || | ||| |||| ||| |||| || | || |||| | |||| || | Sbjct 7117792 TCTTCAAACCCTTAGACCATGCATGGAAGTGCAGAGAAGTTAGTTTTCCGAAATTGGGTT 7117851 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 ||| ||| ||||| | || || ||||| ||| ||| ||||| || |||||| Sbjct 7117852 GTTCCATATGAATATTTAGGCTTTGGCTTTGATCTATGAAACTTCCACGGTCGACAGCCA 7117911 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTG 65296 | |||| || ||| |||||||||||| ||| || Sbjct 7117912 TATCAACGAGTGTTCGTTGTTTTATCTCCCAGACAGTCCTG 7117952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397372993641440