Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beta_20vulgaris_20subsp._20vulgaris_20[refseq_20GCF_5F000511025.2_20 2015-07-07] 40,246 sequences; 566,550,431 total letters Query= NC_031264.1 Length=46877 Score E Sequences producing significant alignments: (Bits) Value seq7044 131 5e-26 >seq7044 Length=857 Score = 131 bits (144), Expect = 5e-26 Identities = 211/289 (73%), Gaps = 11/289 (4%) Strand=Plus/Minus Query 34309 TCTTGGGTCTGCTCGGAGGTTCCCGCCAAGATCGAGTGTTTTCTAAGCGCAAAAGAAGCG 34368 |||||||||||||||| ||||||||||| |||||| | | ||| || || | |||| Sbjct 711 TCTTGGGTCTGCTCGGCGGTTCCCGCCAGGATCGAACG-CTCGGAAGTGC-AAGGCAGCG 654 Query 34369 GTCTTTTTACGGAT-TTGACCCGTTTTCACCGATCACCCGGCGCATGAAATCCACAGCGG 34427 ||| ||||| || | ||| |||| | ||||||| |||||||||||| | |||||| Sbjct 653 GTC-TTTTAGGGTTATTGCCCCG-CGGCTCCGATCATCCGGCGCATGAATCACCCAGCGG 596 Query 34428 TTCCTCATCCCTGGCTGATGAGGCGGTCTTAGCGGGTTAGACGCCGCTCGACTGGTTTGG 34487 | || | || |||| | ||||| | |||| | | ||||| || |||||||| Sbjct 595 TCCCGGCT-CCAGGCTAACCGGGCGGACCGGACGGG-TGGGCGCCGTCTGAATGGTTTGG 538 Query 34488 ATGCGACCTGAGAGAGTGAACTGCCGATACAAGCCTTCATGC-ATGGAGACGGACTGGCC 34546 ||||| | ||| |||| |||| | ||| | | ||| | || |||||||||||||| Sbjct 537 ATGCGGCTTGA-CGAGTAAACT-TGGCAACATGACCTCAACCGATTGAGACGGACTGGCC 480 Query 34547 CACCGGGGAAATAGGGCAGGCAGGGATACTAAGACTTCATAGCATCCCG 34595 |||||| | || |||||| || ||||| | ||||||||||||||| Sbjct 479 CACCGGAGTAA-CGGGCAGCCAAGGATATCCGGTCTTCATAGCATCCCG 432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149813166869028