Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq344994 113 9e-23 seq331825 98.7 2e-18 >seq344994 Length=151 Score = 113 bits (124), Expect = 9e-23 Identities = 85/100 (85%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 237 GTAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGG 296 ||||| || |||||| ||||||| || |||||||||| || |||||||| | ||| Sbjct 151 GTAACACGCTGTGGAGGTCCGAACCAGTTTCCGTTGAAAAGGATTTGGATGACTTGAGGG 92 Query 297 TAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGTAC 336 |||||||||||||||||||||||| ||||||||||||||| Sbjct 91 TAGGGGTGAAAGGCCAATCAAACTAGGAAATAGCTCGTAC 52 >seq331825 Length=148 Score = 98.7 bits (108), Expect = 2e-18 Identities = 109/144 (76%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 145 AGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGACGCGAAACCT 204 ||||| || |||| |||| | ||||||||||| ||| | ||| ||||| ||||||| Sbjct 143 AGCCGTAGAGAAATCGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCA 85 Query 205 TGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCGGT 264 |||||||||||| | |||| ||||| |||||||| || |||||| ||||||| Sbjct 84 GGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCAC 25 Query 265 AAACGTTGAAAAGTTTTCGGATGA 288 || |||||||| || |||||| Sbjct 24 TAATGTTGAAAAATTAGGGGATGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 967430970880