Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq436976 141 6e-32 seq389308 75.2 8e-12 >seq436976 Length=194 Score = 141 bits (156), Expect = 6e-32 Identities = 104/121 (86%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| ||||||||||||||||| ||||| | ||||||||||||| || Sbjct 164 TACGGCTACCTTGTTACGACTTCACCCCAGTCACGAATCCTACCGTGGTAAGCGCCCCCC 105 Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137 ||||||||||||||||||| | ||||| |||||||||||||||||||||||||| Sbjct 104 TTGCGGTTAAGCTACCTACTTCTGGTAAAACCCGCTCCCATGGTGTGACGGGCGGTGTGT 45 Query 138 A 138 | Sbjct 44 A 44 >seq389308 Length=168 Score = 75.2 bits (82), Expect = 8e-12 Identities = 93/125 (74%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 16 CCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGC-GCC- 73 ||||||| ||||||||| |||||||||||||||| || | || ||||| | ||| Sbjct 168 CCTACGGCTACCTTGTTACGACTTCACCCCAGTCGCTAAACCCACCGTGGTCGCCTGCCT 109 Query 74 CTCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGT 133 ||| | |||| | | |||| || | || ||||||||||||||||||||||| Sbjct 108 CTCTTGCGAGTTAGCGCAACGCCTTCGGGTGAATCCAACTCCCATGGTGTGACGGGCGGT 49 Query 134 GTGTA 138 ||||| Sbjct 48 GTGTA 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 343811795400