Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq4382 378 1e-102 seq10745 300 2e-79 seq34752 277 3e-72 seq4686 268 1e-69 seq17117 251 1e-64 seq14940 232 1e-58 seq66329 221 2e-55 seq12458 185 1e-44 seq5456 179 6e-43 seq43690 156 6e-36 seq131881 140 5e-31 seq33038 140 5e-31 seq60694 134 2e-29 seq183031 116 6e-24 seq205687 109 8e-22 seq228616 98.7 1e-18 >seq4382 Length=18589 Score = 378 bits (418), Expect = 1e-102 Identities = 238/253 (94%), Gaps = 3/253 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| | Sbjct 6684 GTACAAAGGGCAGGGACATAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 6741 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 6742 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATTACGATGAAATTTCAAAGATTC 6801 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 6802 CCCGGGCCTGTCGGCCAAGGCTATAAACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 6861 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 6862 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTTCGTGGCCTAAGCT 6921 Query 241 GCCAT-CTCCCTC 252 ||||| |||||| Sbjct 6922 GCCATAGTCCCTC 6934 >seq10745 Length=5470 Score = 300 bits (332), Expect = 2e-79 Identities = 224/257 (87%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 1391 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 1448 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| || ||||| |||||| Sbjct 1449 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAAAGTTTCACAAGATT 1508 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| ||| |||||||||| ||||| || | | ||||||||||||||||||| Sbjct 1509 ACCCAGTCCTTCCGGACAAGGTGATAAACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 1568 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 1569 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTAGCTAAAC 1628 Query 240 GGCCAT-CTCCCTCGAA 255 | | || |||||| || Sbjct 1629 GCCAATAGTCCCTCTAA 1645 >seq34752 Length=7499 Score = 277 bits (306), Expect = 3e-72 Identities = 206/237 (87%), Gaps = 3/237 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| || || ||||||||| ||| |||||||||||| | Sbjct 7489 GTACAAAGGGCAGGGACGTAATCAATGCAAG-TTGATGACTTGCGTTTACTAGGAATT-C 7432 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119 ||||||||||| || |||| |||| ||||||||||| ||||||| | || | |||||| Sbjct 7431 CTCGTTGAAGATTAATAATTACAATAATCTATCCCCAGCACGATGCATGTTGCGAAGATT 7372 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| || | |||||| || ||| | ||||| ||||||||||||||||||||| Sbjct 7371 ACCCAGACCTCTCAGTCAAGGTTGTAAACTTGATGAATGCATCAGTGTAGCGCGCGTGCG 7312 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236 ||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||| Sbjct 7311 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCGAACTTCCGTCGGCTA 7255 >seq4686 Length=7524 Score = 268 bits (296), Expect = 1e-69 Identities = 199/229 (87%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||| || ||||| || ||||||||||| ||| | Sbjct 7519 GTACAAAGGGCAGGGACGTAATCAACGCGATCT-GATGAATCACGCTTACTAGGTATT-C 7462 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||||||||| | ||||| |||||| Sbjct 7461 CTCGTTGAAGAACAATAATTGCAATGTTCTATCCCCATCACGACAGAGTTTCACAAGATT 7402 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| |||| |||| | ||||||| || | ||||||||||||||||||| Sbjct 7401 ACCCATGCCTTCCGGCAAAGGAAAAAGACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 7342 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7341 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 7293 >seq17117 Length=12194 Score = 251 bits (278), Expect = 1e-64 Identities = 191/223 (86%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 || ||||||||| ||| ||||||||| |||||| |||||||| |||||| ||||||| | Sbjct 10034 GTTCAAAGGGCAAGGATGTAGTCAACATGAGCTT-ATGACTCGTGCTTACAAGGAATTAC 9976 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 || |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 9975 -TCATTGAAGACCAACAATTGCAATGATTTATCCCCATCATGATGAAATTTCAAAGATTA 9917 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | ||| || |||| | | | |||| ||||||||||||||||| | |||||| Sbjct 9916 CCCAGGCCTCTCAACCAAAGCTAGAAACTCATTGAATACATCAGTGTACCAGTCGTGCGA 9857 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 223 |||| ||||||||||||| ||||||||||| |||||||||||| Sbjct 9856 CCCATAACATCTAAGGGCGTCACAGACCTGATATTGCCTCAAA 9814 >seq14940 Length=52941 Score = 232 bits (256), Expect = 1e-58 Identities = 195/237 (82%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 7 AGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTT 66 |||| || |||||||| |||||||||| ||||||||||||||||||||||| | | ||| Sbjct 4229 AGGGTAGAGACGTAGTTAACGCGAGCTA-ATGACTCGCGCTTACTAGGAATT-CATTGTT 4286 Query 67 GAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGA 126 ||| |||||||||||||||||||| ||||||||||| ||||||||| ||||| || Sbjct 4287 AAAGGTCAACAATTGCAATGATCTATATCCATCACGATGGAATTTCAAATATTACTTGGG 4346 Query 127 CCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGA 186 ||| || || ||||| ||| | |||||||||| ||||||||| ||||| ||| | ||| Sbjct 4347 CCTATCAGCTAAGGTTATAAATTCGTTGAATATATCAGTGTAACGCGCATGCAACTTAGA 4406 Query 187 ACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCC 243 |||| |||| |||||| |||||||||||| |||||| |||| ||| | || |||| Sbjct 4407 ACATTTAAGAGCATCATTGACCTGTTATTGACTCAAATTTCCATGGACCAAGTGGCC 4463 >seq66329 Length=1381 Score = 221 bits (244), Expect = 2e-55 Identities = 175/206 (85%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| |||||||||| ||||||| ||| |||||| ||||||||||||| ||| | Sbjct 774 GTACAAAGGTCAGGGACGTAATCAACGCATGCT-GATGACACGCGCTTACTAGGCATT-C 831 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||| | ||| |||||||||| | |||||||| ||||| | ||| | |||||| Sbjct 832 CTCGTTGAAAAGCAATAATTGCAATGCTTTATCCCCAGCACGACAGAGTTTAACAAGATT 891 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||| |||||||| |||||||| | ||||||||||||||||||| Sbjct 892 ACCCAGACCTTTCGGTCAAGGTGAAGAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 951 Query 180 GCCCAGAACATCTAAGGGCATCACAG 205 |||||||||||||||||||||||||| Sbjct 952 GCCCAGAACATCTAAGGGCATCACAG 977 >seq12458 Length=15987 Score = 185 bits (204), Expect = 1e-44 Identities = 122/131 (93%), Gaps = 3/131 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||| |||| |||||||||| |||| |||||||||||||||||||||||| | Sbjct 1692 GTACAAAGGGCAAGGACATAGTCAACGCAAGCT-GATGACTCGCGCTTACTAGGAATT-C 1749 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1750 CTCGTTGAAGACCAACAATTGCAATGATCTAT-CCCATCACGATGAAATTTCAAAGATTA 1808 Query 121 CCCGGACCTGT 131 ||| ||||| Sbjct 1809 CCCAAGCCTGT 1819 Score = 172 bits (190), Expect = 8e-41 Identities = 117/130 (90%), Gaps = 1/130 (1%) Strand=Plus/Plus Query 124 GGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCC 183 || ||||| |||||||| ||| |||||||||||||||||||||||||||| || ||||| Sbjct 3961 GGGCCTGTTGGCCAAGGCTATAAACTCGTTGAATACATCAGTGTAGCGCGCATGTGGCCC 4020 Query 184 AGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCC 243 ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||| Sbjct 4021 AGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATGACCTAAGTGGCC 4080 Query 244 AT-CTCCCTC 252 || |||||| Sbjct 4081 ATAGTCCCTC 4090 >seq5456 Length=3207 Score = 179 bits (198), Expect = 6e-43 Identities = 160/195 (82%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 ||||||||||| ||| ||| |||| || ||||| | ||| | ||| ||| |||| || Sbjct 499 TACAAAGGGCAAGGATGTAATCAAAGCAAGCTT-AGAACTTGTGCTAGCTATAAATT-CC 442 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTAC 121 || ||||||| || ||||| |||| |||||||||| ||||||| ||||||||| |||||| Sbjct 441 TCATTGAAGAACA-CAATTACAATAATCTATCCCCGTCACGATAAAATTTCAATGATTAC 383 Query 122 CCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGC 181 || |||||| ||||||| ||| |||| ||||||| |||||||||| ||| ||||||| Sbjct 382 TTGGGCCTGTCAGCCAAGGCTATAAACTCATTGAATATATCAGTGTAGGGCGTGTGCGGC 323 Query 182 CCAGAACAT-CTAAG 195 ||||||||| ||||| Sbjct 322 CCAGAACATCCTAAG 308 >seq43690 Length=941 Score = 156 bits (172), Expect = 6e-36 Identities = 112/127 (88%), Gaps = 3/127 (2%) Strand=Plus/Minus Query 131 TCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACAT 190 ||| |||||| ||| ||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 189 TCGTCCAAGGCTATAAACTCGTTGAATACCTCAGTGTAGCGCGCTTGCGGCCCAGAACAT 130 Query 191 CTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCATC--TC 248 ||||||||||||||| |||||||||||||||||||||||| | || ||| |||| | || Sbjct 129 CTAAGGGCATCACAGCCCTGTTATTGCCTCAAACTTCCGTTGGCT-AAACGCCAACAGTC 71 Query 249 CCTCGAA 255 |||| || Sbjct 70 CCTCTAA 64 >seq131881 Length=109 Score = 140 bits (154), Expect = 5e-31 Identities = 97/109 (89%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 136 CAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCC-CAGAACATCTAA 194 ||||| ||| |||||||||||||||||| ||||| ||||||||||| || ||||||||| Sbjct 1 CAAGGCTATAAACTCGTTGAATACATCAGCGTAGCACGCGTGCGGCCACAAAACATCTAA 60 Query 195 GGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCC 243 |||||||||| || |||||||||||||||||||| |||||||| |||| Sbjct 61 GGGCATCACAAACATGTTATTGCCTCAAACTTCCATGGCCTAAGCGGCC 109 >seq33038 Length=65722 Score = 140 bits (154), Expect = 5e-31 Identities = 136/175 (78%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 71 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTG 130 ||| ||||||||||| | ||||||| |||| ||||||||| ||||||||| | | || Sbjct 30478 ACCGACAATTGCAATAAACTATCCCTGTCACAATGAAATTTTAAAGATTACTTGAGCTTG 30537 Query 131 TCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACAT 190 | | |||||| ||| |||| ||||||||| || |||| ||||||| ||| | | || Sbjct 30538 TTGACCAAGGCTATAAACTCTTTGAATACAGTAGCGTAGTGCGCGTGAGGCTTAAGATAT 30597 Query 191 CTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT 245 ||||| |||||| | || | |||||||||||||||| | ||||||| ||||| Sbjct 30598 CTAAGAGCATCATATACATATTATTGCCTCAAACTTTTGAGGCCTAAGTAGCCAT 30652 Score = 140 bits (154), Expect = 5e-31 Identities = 136/175 (78%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 71 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTG 130 ||| ||||||||||| | ||||||| |||| ||||||||| ||||||||| | | || Sbjct 30791 ACCGACAATTGCAATAAACTATCCCTGTCACAATGAAATTTTAAAGATTACTTGAGCTTG 30850 Query 131 TCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACAT 190 | | |||||| ||| |||| ||||||||| || |||| ||||||| ||| | | || Sbjct 30851 TTGACCAAGGCTATAAACTCTTTGAATACAGTAGCGTAGTGCGCGTGAGGCTTAAGATAT 30910 Query 191 CTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT 245 ||||| |||||| | || | |||||||||||||||| | ||||||| ||||| Sbjct 30911 CTAAGAGCATCATATACATATTATTGCCTCAAACTTTTGAGGCCTAAGTAGCCAT 30965 >seq60694 Length=4481 Score = 134 bits (148), Expect = 2e-29 Identities = 93/103 (90%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||| ||||| |||||||| ||||||||||| ||| | Sbjct 3552 GTACAAAGGGCAGGGACGTAATCAACGTGAGCT-GATGACTCACGCTTACTAGGCATT-C 3495 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 ||||||||||| ||| |||||||||| |||||||||| ||||| Sbjct 3494 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGA 3452 >seq183031 Length=117 Score = 116 bits (128), Expect = 6e-24 Identities = 96/116 (83%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 73 CAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGT 131 ||| |||||||||| |||||||||| ||||| | | ||| | |||||||||| ||| | Sbjct 116 CAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATTACCCAAGCCTTT 57 Query 132 CGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAA 187 |||| |||| || | |||||||| | | ||||||||||||||||||||||||||| Sbjct 56 CGGCTAAGGAGAGATACTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAA 1 >seq205687 Length=120 Score = 109 bits (120), Expect = 8e-22 Identities = 99/121 (82%), Gaps = 3/121 (2%) Strand=Plus/Plus Query 73 CAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGT 131 ||| |||||||||| |||||||||| ||||| | ||| | |||||||||||| ||| Sbjct 2 CAATAATTGCAATGCTCTATCCCCAGCACGACGGGGTTTAACAAGATTACCCGGGCCTTC 61 Query 132 CGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATC 191 ||||||||| || ||||| || | ||||||||||||||||||||||||||||||| Sbjct 62 CGGCCAAGG-GAGC-ACTCGCTGGCCCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATC 119 Query 192 T 192 | Sbjct 120 T 120 >seq228616 Length=125 Score = 98.7 bits (108), Expect = 1e-18 Identities = 85/103 (83%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||| ||| Sbjct 115 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAA-TTC 58 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 |||||| | | || ||||||||| | ||||||||||||| Sbjct 57 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGA 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 747979299225