Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq464116 228 2e-57 seq974 159 9e-37 seq374854 156 1e-35 seq384230 138 3e-30 seq19679 129 2e-27 seq304848 98.7 3e-18 seq18338 96.9 9e-18 seq415145 95.1 3e-17 seq60615 93.3 1e-16 seq29810 87.8 5e-15 seq512363 77.0 8e-12 >seq464116 Length=216 Score = 228 bits (252), Expect = 2e-57 Identities = 137/144 (95%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 73 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 132 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||||||||||||||||||||||||||||||||||||||| |||||| | | || Sbjct 133 GAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTTGTAAGTCTGACGT 192 Query 123 GAAATCCCCGGGCTTAACCTGGGA 146 |||||||||||||| ||||||||| Sbjct 193 GAAATCCCCGGGCTCAACCTGGGA 216 >seq974 Length=77894 Score = 159 bits (176), Expect = 9e-37 Identities = 225/316 (71%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 22 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC 81 |||||||| |||||||||| ||||||||||| ||| ||||||||||| |||||| | Sbjct 55192 GGCTAACTCTGTGCCAGCAGTCGCGGTAATACTGAGGATGCAAGCGTTATCCGGAATGAT 55133 Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141 || ||||||||||| | ||| || | | |||| | | ||||| | ||||| |||| Sbjct 55132 TGAGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTTGCCATCAAATCTCAGGGCTCAACC 55073 Query 142 TGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGT 201 ||| || | | ||| | || |||| | || || | |||||| | || Sbjct 55072 CTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAAGGAATTTCCGGT 55013 Query 202 GTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGA 261 | || |||||||||||||| || | | ||||||| |||||| ||| ||||| Sbjct 55012 GGAGTGGTGAAATGCGTAGAGATCGAAAAGGACACCAACGGCGAAAGCACTTTGCTGGGC 54953 Query 262 TAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 321 |||||||| || | | |||||||| |||||||||| |||||| |||||| ||||| Sbjct 54952 CGACACTGACACTAAGGGACGAAAGCTAGGGGAGCAAATGGGATTAAATACCCCAGTAGT 54893 Query 322 CCACGCCCTAAACGAT 337 || | | |||||||| Sbjct 54892 CCTAGTCGTAAACGAT 54877 >seq374854 Length=162 Score = 156 bits (172), Expect = 1e-35 Identities = 104/116 (90%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 294 AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGG 353 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||| || Sbjct 1 AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCTACTAGTTGTCGG 60 Query 354 GGATTTACTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || | | |||||||||| |||||||||||||||| ||||||||||||| ||| Sbjct 61 GTTTTAATTAACTTGGTAACGCAGCTAACGCGTGAAGTAGACCGCCTGGGGAGTAC 116 >seq384230 Length=165 Score = 138 bits (152), Expect = 3e-30 Identities = 124/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 181 GAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAAT 240 |||| || ||||| || ||||| ||||||||| |||||| | |||| || || Sbjct 156 GAGGTTGGCGGAATGGACCGAGTAGCGGTGAAATGCATAGATACGGTCCAGAACCCCGAT 97 Query 241 GGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAAC 300 ||||||||||| || || | ||||||||| | |||||| |||||||||||| ||| Sbjct 96 TGCGAAGGCAGCTGACTAGGCTGTTACTGACGCTGAGGCACGACAGCGTGGGGAGCGAAC 37 Query 301 AGGATTAGATACCCTGGTAGTCCACGCCCTAAACGA 336 |||||||||||||||||||||||||||| ||||||| Sbjct 36 AGGATTAGATACCCTGGTAGTCCACGCCGTAAACGA 1 >seq19679 Length=43052 Score = 129 bits (142), Expect = 2e-27 Identities = 112/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||||||||||||||||||||| ||| ||| Sbjct 39025 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGC 39084 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | |||| | | || Sbjct 39085 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGT 39144 Query 123 GAAATCCCCGGGCTTAACC 141 ||||||| ||||| |||| Sbjct 39145 CAAATCCCAGGGCTCAACC 39163 >seq304848 Length=141 Score = 98.7 bits (108), Expect = 3e-18 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 266 ACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 325 ||||||||| | | ||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 57 ACTGACGCTAAGGTACGAAAGCGTGGGGAGCAAACGGGATTAGATACCCCAGTAGTCCAC 116 Query 326 GCCCTAAACGAT 337 ||| |||||||| Sbjct 117 GCCGTAAACGAT 128 >seq18338 Length=40663 Score = 96.9 bits (106), Expect = 9e-18 Identities = 151/215 (70%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 7 TGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGC 66 |||| |||||||| || |||||| | ||| |||||| |||||||| ||| ||||||| Sbjct 22871 TGAAAAATAAGCATCGACTAACTCTATACCAACAGCCGTGGTAATACAAAGGATGCAAGC 22812 Query 67 GTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAA 126 || |||||| | |||||||||||||| | ||| | | | |||| | | | ||| Sbjct 22811 AATATCCGGAATGATTGGGCGTAAAGCGTATGTAGGTGACTTTTTAAGTCCGCCATCAAA 22752 Query 127 TCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGG 186 |||| || ||||||| ||| ||| | ||| | || |||| || || | Sbjct 22751 TCCCAGGACTTAACCCTGGACATGCGGTAAAAACTACCAAGCTGGAGTACGT-AGGGACA 22693 Query 187 GGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGA 221 ||||||| | ||| |||| ||||||||||||| Sbjct 22692 TATGGAATTTCCGGTGAAGCAATGAAATGCGTAGA 22658 >seq415145 Length=180 Score = 95.1 bits (104), Expect = 3e-17 Identities = 77/91 (85%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 3 TACCTGAAGAA-TAAGCACCGGCTAA-CTACGTGCCAGCAGCCGCGGTAATACGTAGGGT 60 ||||||||||| |||||| ||||||| | |||||||||||||||||||| ||| || | Sbjct 90 TACCTGAAGAACTAAGCATCGGCTAAACCCCGTGCCAGCAGCCGCGGTAAGACGGGGGAT 149 Query 61 GCAAGCGTTAATCGGAATTACTGGGCGTAAA 91 || ||||||| |||||| | |||||||||| Sbjct 150 GCGAGCGTTATCCGGAATGATTGGGCGTAAA 180 >seq60615 Length=7980 Score = 93.3 bits (102), Expect = 1e-16 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 229 AGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCG 288 |||| |||||| ||| | |||| || || | | |||| || | | ||||||||| Sbjct 4711 AGGACTACCAATAGCGGAAGCAGGTTACTAGGTAGAGATTGACACTGAGGTACGAAAGCG 4652 Query 289 TGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 | |||||||||||| ||||||||| ||||||||| |||||||||||||| Sbjct 4651 TAGGGAGCAAACAGAATTAGATACTCTGGTAGTCTACGCCCTAAACGAT 4603 >seq29810 Length=40436 Score = 87.8 bits (96), Expect = 5e-15 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||| || | ||| |||||| | |||| || |||| | | |||||||||||| Sbjct 22240 GGAATTGCAAGAGTAAGGATGAAATCTTTTGATACTTGTAGGACCGCTAATGGCGAAGGC 22181 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | | | || || ||||||| | | | ||| | |||| |||||| || ||||||||| Sbjct 22180 ATCGTTCCAGGTAAAGACTGACGTTGAGGGACGTAGGCGTTGGGAGCGAAAAGGATTAGA 22121 Query 310 TACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||| |||||| |||| |||||||| Sbjct 22120 TACCCCTGTAGTCAACGCTGTAAACGAT 22093 >seq512363 Length=306 Score = 77.0 bits (84), Expect = 8e-12 Identities = 45/47 (96%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTA 49 |||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct 260 TACCTGCAGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTA 306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1282482504160