Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq360727 152 5e-35 seq481895 86.0 6e-15 seq60615 73.4 4e-11 >seq360727 Length=156 Score = 152 bits (168), Expect = 5e-35 Identities = 90/94 (96%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 124 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 94 GCTGCGACTGTTTAATAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 35 Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||||||| ||||| |||| ||||| Sbjct 34 TGACGCCTGCCCGGTGCTGGAAGATTAAATGATG 1 >seq481895 Length=238 Score = 86.0 bits (94), Expect = 6e-15 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||| || ||| ||| || ||| ||||||||| || ||| Sbjct 164 GCGACTGTTTAACAAAAACACATGGCTTTGCTAACGCGTAAGCGGACGTATAAGGCCTGA 105 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||||||||| Sbjct 104 CACCTGCCCGGTGCTGGAAGGTTAA 80 >seq60615 Length=7980 Score = 73.4 bits (80), Expect = 4e-11 Identities = 62/75 (83%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAA-AGTGGACGTATAGGGTGT 125 |||||||||||| ||||||||||| |||| ||||| || ||||| |||||||| ||| Sbjct 2113 TGCGACTGTTTACCTAAAACACAGCAGCCTGCTAACACTAACAGTGGTCGTATAGGTTGT 2054 Query 126 GACGCCTGCCCGGTG 140 || |||| |||||| Sbjct 2053 GATTCCTGTCCGGTG 2039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474250704615