Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq10745 410 2e-112 seq34752 264 2e-68 seq4382 251 1e-64 seq43690 199 6e-49 seq337349 190 3e-46 seq199860 161 2e-37 seq494909 145 1e-32 seq12458 143 4e-32 seq4686 143 4e-32 seq185527 140 5e-31 seq215807 134 2e-29 seq71968 123 4e-26 seq17117 122 1e-25 seq100577 111 2e-22 seq2577 111 2e-22 seq46526 107 3e-21 seq131881 100 5e-19 seq66329 98.7 2e-18 seq3909 89.7 8e-16 seq464966 80.6 4e-13 seq102431 77.0 5e-12 seq205687 75.2 2e-11 seq14940 73.4 6e-11 >seq10745 Length=5470 Score = 410 bits (454), Expect = 2e-112 Identities = 245/257 (95%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1536 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 1595 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||| Sbjct 1596 CCTGTTATTGCCTCAAACTTCCATTAGCTAAACGCCAATAGTCCCTCTAAGAAGCCAGCG 1655 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1656 GTTAACCAAAGTCGACCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 1715 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1716 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 1775 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 1776 AGAGCTATCAATCTGTC 1792 >seq34752 Length=7499 Score = 264 bits (292), Expect = 2e-68 Identities = 194/222 (87%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7330 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 7271 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCAT-AGT- 133 ||||||| | |||| | || ||||||||||||||||| || | || || ||| Sbjct 7270 GAACTTCCGTCGGCTACACACCGATAGTCCCTCTAAGAAGTCACGTCCAAAGCACGAGTG 7211 Query 134 CGATGGGG--CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 | || | ||||||||||||| ||||||||||||||| ||||||||||||||||||| Sbjct 7210 CTTTGTCGAACTATTTAGCAGGTCGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAAT 7151 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233 | |||||||||||||||||||||||||||||||||||||||| Sbjct 7150 CGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 7109 >seq4382 Length=18589 Score = 251 bits (278), Expect = 1e-64 Identities = 214/261 (82%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6828 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 6887 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||| | | | || |||| | ||||||||||| ||||| | Sbjct 6888 CCTGTTATTGCCTCAAACTTTCGTGGCCT--AAGCTGCCATAGTCCCTCTTGGAAGCTGG 6945 Query 120 CCACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | || || |||| ||| ||| | ||||||| || |||| | ||| Sbjct 6946 CCGCGGAAGGGATCCTCCGCATAGCTAGTTAATAGGCTGAGGTCTCATTTGTTAACAGAA 7005 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct 7006 TTAACTAGACAAATCGCTCCACTAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 7065 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| ||| |||||| Sbjct 7066 AGAAAGAGCTCTCAGTCTGTC 7086 >seq43690 Length=941 Score = 199 bits (220), Expect = 6e-49 Identities = 148/173 (86%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 173 ACTCGTTGAATACCTCAGTGTAGCGCGCTTGCGGCCCAGAACATCTAAGGGCATCACAGC 114 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| |||||| | ||||| ||||||||||||||| | | Sbjct 113 CCTGTTATTGCCTCAAACTTCCGTTGGCTAAACGCCAACAGTCCCTCTAAGAAGTCGACG 54 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCG 174 |||| || || || | ||||||||||||||||||||||||||||||||| Sbjct 53 ACCAGCCGAAGCCGGCCTGACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCG 1 >seq337349 Length=149 Score = 190 bits (210), Expect = 3e-46 Identities = 133/150 (89%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 41 AACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAAT 100 ||||||||||||||||||||||||||| ||||||| ||||||||||||| || ||||| Sbjct 149 AACATCTAAGGGCATCACAGACCTGTTTTTGCCTCGTACTTCCATTGGCTTGA-GCCAAA 91 Query 101 AGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGT 160 |||||||||||||||||||| ||| || | ||| | |||||||||||||||| ||||| Sbjct 90 AGTCCCTCTAAGAAGCCAGCAACCCACAAAAGTGAGTTGGGCTATTTAGCAGGTCAAGGT 31 Query 161 CTCGTTCGTTATCGGAATTAACCAGACAAA 190 |||||||||||||| |||||| |||||||| Sbjct 30 CTCGTTCGTTATCGCAATTAAGCAGACAAA 1 >seq199860 Length=119 Score = 161 bits (178), Expect = 2e-37 Identities = 107/119 (90%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 52 GCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAA 111 ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct 119 GCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTTTATGCCAATAGTCCCTCTAA 60 Query 112 GAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTT 170 ||||||||| |||| | | || | |||||||||||||||||||||||||||||||| Sbjct 59 GAAGCCAGCGACCAGCAAAAGCTAGTCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTT 1 >seq494909 Length=260 Score = 145 bits (160), Expect = 1e-32 Identities = 98/110 (89%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || Sbjct 151 ACCTGTTATTGCCTCAAACTTCCATTGGCTAAACGCCAATAGTCCCTCTAAGAAGCCGGC 210 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTT 170 || | | | || || | |||||||||||||||||||||||||||||||| Sbjct 211 GACTAGCAAAAGCCGGTCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTT 260 >seq12458 Length=15987 Score = 143 bits (158), Expect = 4e-32 Identities = 138/176 (78%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||| || |||||||||||||||||||||||||||| Sbjct 3984 ACTCGTTGAATACATCAGTGTAGCGCGCATGTGGCCCAGAACATCTAAGGGCATCACAGA 4043 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| || | | ||||||||||| ||||| ||| Sbjct 4044 CCTGTTATTGCCTCAAACTTCCATGACCTAAGTGGCCATAGTCCCTCTTAGAAGATGGCC 4103 Query 122 ACCAA--CCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGG 175 | || || || | |||| ||| |||| | ||||||||||||||| ||| Sbjct 4104 GCGAAGGGGATCCTCCACATAGCTAGTTAACAGGCTGAGGTCTCGTTCGTTAACGG 4159 >seq4686 Length=7524 Score = 143 bits (158), Expect = 4e-32 Identities = 82/84 (98%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7374 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 7315 Query 62 CCTGTTATTGCCTCAAACTTCCAT 85 |||||||||||||||||||||||| Sbjct 7314 CCTGTTATTGCCTCAAACTTCCAT 7291 >seq185527 Length=117 Score = 140 bits (154), Expect = 5e-31 Identities = 101/117 (86%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 52 GCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAA 111 ||||||||||||||||||||||||||||||||| |||| | ||| |||||||||||| Sbjct 1 GCATCACAGACCTGTTATTGCCTCAAACTTCCAACGGCTAAACGCCGTTAGTCCCTCTAA 60 Query 112 GAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCG 168 ||||||| | ||| ||| || || |||||||||||||||||||||||||||||| Sbjct 61 GAAGCCAACGGCCAGCCAAAGCCGGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCG 117 >seq215807 Length=122 Score = 134 bits (148), Expect = 2e-29 Identities = 103/122 (84%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 52 GCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAA 111 ||||||||||||||||||||||||||||||||| ||| | || |||||||||||| Sbjct 122 GCATCACAGACCTGTTATTGCCTCAAACTTCCAACAGCTAAACGCTGTTAGTCCCTCTAA 63 Query 112 GAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTA 171 |||| |||| |||| | | || || || |||||||||||||||||||||||||||||| Sbjct 62 GAAGTCAGCGACCAGCAAAAGCCGGCTGGACTATTTAGCAGGTTAAGGTCTCGTTCGTTA 3 Query 172 TC 173 || Sbjct 2 TC 1 >seq71968 Length=100 Score = 123 bits (136), Expect = 4e-26 Identities = 83/93 (89%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 166 TCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA 225 ||||||||| |||||| ||||||| |||| |||| ||||||||||||||||||||||||| Sbjct 100 TCGTTATCGCAATTAAGCAGACAAGTCACCCCACGAACTAAGAACGGCCATGCACCACCA 41 Query 226 CCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 || | ||||||||||||||| |||||||||| Sbjct 40 CCTGAAAAATCAAGAAAGAGCTCTCAATCTGTC 8 >seq17117 Length=12194 Score = 122 bits (134), Expect = 1e-25 Identities = 169/240 (70%), Gaps = 35/240 (15%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||| | |||||| |||| ||||||||||||| ||||||||||| ||||||||| Sbjct 9876 TCAGTGTACCAGTCGTGCGACCCATAACATCTAAGGGCGTCACAGACCTGATATTGCCTC 9817 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG 135 ||| ||||| | | | ||| | || || | ||| Sbjct 9816 AAA------TTGGCCGTAG----AGGGTCAC-CTCAGTA---------------TAG--- 9786 Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 ||| ||| || | | |||||| ||| |||| | ||||||| || | ||||| || Sbjct 9785 ------CTAGTTAACAAGCTGAGGTCTTGTTTGTTAACAGAATTAATCAAAAAAATCGCT 9732 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||||||||||||| | |||||||||||||| |||| |||||| |||||||| |||||| Sbjct 9731 CCACCAACTAAGAATGACCATGCACCACCACTCATATAATCAATAAAGAGCTTACAATCT 9672 >seq100577 Length=105 Score = 111 bits (122), Expect = 2e-22 Identities = 78/89 (88%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200 |||| || |||| | ||| ||||||||||| ||||||||| |||||||||| |||||| Sbjct 89 GCTAGGTAACAGGCTGAGGGCTCGTTCGTTAACGGAATTAAACAGACAAATCGATCCACC 30 Query 201 AACTAAGAACGGCCATGCACCACCACCCA 229 |||||||| |||||||||||||||||||| Sbjct 29 AACTAAGACCGGCCATGCACCACCACCCA 1 >seq2577 Length=75470 Score = 111 bits (122), Expect = 2e-22 Identities = 75/84 (89%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227 |||| | | |||||||||| ||||| | ||||||||||||||||||||| |||||||||| Sbjct 674 GTTAACAGTATTAACCAGAAAAATCGCCCCACCAACTAAGAACGGCCATACACCACCACC 615 Query 228 CATAGAATCAAGAAAGAGCTATCA 251 |||||||| ||||||||||| ||| Sbjct 614 CATAGAATTAAGAAAGAGCTCTCA 591 >seq46526 Length=1156 Score = 107 bits (118), Expect = 3e-21 Identities = 74/84 (88%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227 |||| | | |||||||||| ||||| | ||||||||||||||| ||||| |||||||||| Sbjct 483 GTTAACAGTATTAACCAGAAAAATCGCCCCACCAACTAAGAACAGCCATACACCACCACC 542 Query 228 CATAGAATCAAGAAAGAGCTATCA 251 |||||||| ||||||||||| ||| Sbjct 543 CATAGAATTAAGAAAGAGCTCTCA 566 >seq131881 Length=109 Score = 100 bits (110), Expect = 5e-19 Identities = 74/85 (87%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCC-CAGAACATCTAAGGGCATCACAG 60 ||||| || | | |||| ||||| ||||||||||| || ||||||||||||||||||| Sbjct 12 ACTCGTTGAATACATCAGCGTAGCACGCGTGCGGCCACAAAACATCTAAGGGCATCACAA 71 Query 61 ACCTGTTATTGCCTCAAACTTCCAT 85 || |||||||||||||||||||||| Sbjct 72 ACATGTTATTGCCTCAAACTTCCAT 96 >seq66329 Length=1381 Score = 98.7 bits (108), Expect = 2e-18 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 919 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 977 >seq3909 Length=79119 Score = 89.7 bits (98), Expect = 8e-16 Identities = 52/54 (96%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 4643 CAGCCAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 4696 >seq464966 Length=217 Score = 80.6 bits (88), Expect = 4e-13 Identities = 47/49 (96%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 197 CACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAG 245 |||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct 127 CACCAACTAAGAACAGCCATGCACCAACACCCATAGAATCAAGAAAGAG 79 >seq102431 Length=105 Score = 77.0 bits (84), Expect = 5e-12 Identities = 76/97 (78%), Gaps = 6/97 (6%) Strand=Plus/Plus Query 99 ATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG----ATGGGGCTATTTAGCAGGT 154 |||||||||||||||||| ||| || ||| | | || | ||| ||| |||| Sbjct 11 ATAGTCCCTCTAAGAAGCTGGCCCCCGACCCCACCCCCCCCATAG--CTAGTTAACAGGC 68 Query 155 TAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 | ||||||||||||||| ||||||||||||||||||| Sbjct 69 TCAGGTCTCGTTCGTTAACGGAATTAACCAGACAAAT 105 >seq205687 Length=120 Score = 75.2 bits (82), Expect = 2e-11 Identities = 44/46 (96%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 47 ||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 75 ACTCGCTGGCCCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 120 >seq14940 Length=52941 Score = 73.4 bits (80), Expect = 6e-11 Identities = 58/70 (83%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||| ||||| ||| | ||||||| |||| |||||| |||||||||||| ||| Sbjct 4381 TCAGTGTAACGCGCATGCAACTTAGAACATTTAAGAGCATCATTGACCTGTTATTGACTC 4440 Query 76 AAACTTCCAT 85 ||| |||||| Sbjct 4441 AAATTTCCAT 4450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 792539768115