Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq283537 123 9e-26 seq331825 118 4e-24 seq344994 107 7e-21 seq478848 105 2e-20 seq60615 96.9 1e-17 seq330153 93.3 2e-16 seq960 93.3 2e-16 seq267867 87.8 6e-15 seq454188 82.4 3e-13 seq272036 80.6 1e-12 seq12061 80.6 1e-12 seq14697 77.0 1e-11 >seq283537 Length=136 Score = 123 bits (136), Expect = 9e-26 Identities = 107/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 142 ACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTA 201 |||| ||| |||||| ||||||||||||||| | |||||||||||||||||||||||| Sbjct 133 ACCTCAATAGATTTCGCGGAGAACCAGCTATCTCCGAGTTTGATTGGCCTTTCACCCCTA 74 Query 202 TCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTAC 261 |||||| |||||||| |||||||| |||||||||| |||||| ||| |||| Sbjct 73 GCCACAGCTCATCCCCGACTTTTTCAACAGGCGTGGGTTCGGCCCTCCAGTGGGTGTTAC 14 Query 262 CCGCGCTTCAACC 274 || ||||| || Sbjct 13 CCCACCTTCAGCC 1 >seq331825 Length=148 Score = 118 bits (130), Expect = 4e-24 Identities = 116/149 (78%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 210 TCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTT 269 ||||||||| | |||||||| | ||||||||||| |||||| | || ||||| ||| Sbjct 1 TCATCCCCTAATTTTTCAACATTAGTGGGTTCGGACCTCCAGGGCGTGTTACCGCACCTT 60 Query 270 CAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCT 329 || |||| |||||| |||||||| | | ||||||||| | | || ||| |||||| Sbjct 61 CATCCTGGCCATGGGTAGATCACCTGGTTTCGGGTCTACACCCAGCGACT--GTCGCCCT 118 Query 330 ATTCGGACTCGCTTTCGCTACGGCTACCC 358 |||||||||| |||| |||||||| ||| Sbjct 119 GTTCGGACTCGATTTCTCTACGGCTCCCC 147 >seq344994 Length=151 Score = 107 bits (118), Expect = 7e-21 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 133 CGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTT 192 |||||||| |||| ||| |||||||||||| || |||||| | ||||||||||||||| Sbjct 23 CGACGCTGTACCTCAATACATTTCGGGGAGTACGAGCTATTTCCTAGTTTGATTGGCCTT 82 Query 193 TCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCAC 251 ||||||||| || || ||||||| |||||||| || ||||||| ||||||| Sbjct 83 TCACCCCTACCCTCAAGTCATCCAAATCCTTTTCAACGGAAACTGGTTCGGACCTCCAC 141 >seq478848 Length=234 Score = 105 bits (116), Expect = 2e-20 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 481 CTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATC 540 |||||||||||||| || ||||| |||||| |||||||||||||||||| || | ||||| Sbjct 232 CTATTTCACTCCCCTCCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATC 173 Query 541 GGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598 |||| | |||||||||| ||| || ||||||| ||| |||| || ||||| Sbjct 172 GGTCGATTACGAGTATTTAGCCTTGGAGGATGGTCCCCCCATCTTCAGACAGGATTTC 115 >seq60615 Length=7980 Score = 96.9 bits (106), Expect = 1e-17 Identities = 122/173 (71%), Gaps = 20/173 (12%) Strand=Plus/Plus Query 134 GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTT 193 |||||||||| ||||||||||| |||||||||||||||||| ||| |||| || ||| Sbjct 2962 GACGCTGCACTGCAATGCATTTCGCAGAGAACCAGCTATCACGACGTTAGATTAGCATTT 3021 Query 194 CACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGC 253 ||| |||| |||||| ||||| || | | |||| || | |||||| ||| Sbjct 3022 CACTCCTAACCACAGATCATCAGAGCACTATGCAACGTACATCTGTTCGGACCT------ 3075 Query 254 GGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCT 306 | | ||||||||||| |||||||| ||| ||||||||| Sbjct 3076 --------------ATAATCCTGCCCATGGCTAGATCACGTCGTTTCGGGTCT 3114 >seq330153 Length=147 Score = 93.3 bits (102), Expect = 2e-16 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 511 ACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGG 570 ||||||||||||||||||| || ||||||||||||| | ||||||||||||||| ||| Sbjct 147 ACCTTTCCCTCACGGTACTAGTTCGCTATCGGTCACATACGAGTATTTAGGCTTAGAGGG 88 Query 571 TGGTCCCGCCAGATTCACACGAAATTTCA 599 ||||||| | | |||| || |||| || Sbjct 87 TGGTCCCCCTATGTTCAGACAGAATTACA 59 >seq960 Length=120999 Score = 93.3 bits (102), Expect = 2e-16 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 471 GTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTT 530 |||||| || ||||||||||| | | ||| || ||||||||| ||||||||| |||| Sbjct 99922 GTTTCATGTTCTATTTCACTCTCTGATAGGAGTTCTTTTCACCCTTCCCTCACAATACTA 99863 Query 531 GTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590 | | ||||||| |||| |||||||||||| ||| || ||||| ||||||||| Sbjct 99862 CTTCACTATCGGCCACCCAGGAGTATTTAGCCTTGCAAGGGGGTCCTTATTGATTCACAC 99803 Query 591 GAAATT 596 | ||| Sbjct 99802 AAGATT 99797 >seq267867 Length=133 Score = 87.8 bits (96), Expect = 6e-15 Identities = 107/142 (75%), Gaps = 12/142 (8%) Strand=Plus/Plus Query 392 CGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCC 451 ||| |||||||||||||| |||||||| |||| ||| | ||| | | |||| Sbjct 1 CGCCGGCTCATTCTTCAACAGGCACGCGGTCAGG-GGTTC----AAGCCCC-----CTCC 50 Query 452 GACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCC-CGCCAGGGGTACTTTTC 510 || | ||||| || | ||||||| | || |||||||||| | |||||| | |||||| Sbjct 51 CACCGCTTGTAAGCTTACGGTTTCATGGTCTTTTTCACTCCCTCTCCAGGGTT-CTTTTC 109 Query 511 ACCTTTCCCTCACGGTACTTGT 532 ||| ||||||||||||||| || Sbjct 110 ACCCTTCCCTCACGGTACTAGT 131 >seq454188 Length=206 Score = 82.4 bits (90), Expect = 3e-13 Identities = 110/150 (73%), Gaps = 6/150 (4%) Strand=Plus/Minus Query 205 ACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCG 264 |||| |||||| | | ||||||| | || ||| ||| ||||||| | |||| ||| Sbjct 206 ACAGCTCATCCGCCGATCTTTCAACATCGGTCGGTACGGGCCTCCACTCAGTCTCACCAA 147 Query 265 CGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCT-TGATCG-TGCCACTCAT 322 |||||| |||| |||||| ||||||||| | |||||||| | | || || || | Sbjct 146 AGCTTCACCCTGGCCATGGTTAGATCACTCGGGTTCGGGTCCATAAACGATGACA----T 91 Query 323 ACGCCCTATTCGGACTCGCTTTCGCTACGG 352 ||||| || |||| ||||||||||||| Sbjct 90 GGGCCCTTGTCAGACTTGCTTTCGCTACGG 61 >seq272036 Length=134 Score = 80.6 bits (88), Expect = 1e-12 Identities = 102/140 (73%), Gaps = 13/140 (9%) Strand=Plus/Plus Query 393 GCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCG 452 || |||||||||||||| |||||||| |||| | | || ||| |||| Sbjct 1 GCCGGCTCATTCTTCAACAGGCACGCGGTCAGA-GATCACT---------TTCCCCTCCC 50 Query 453 ACGGATTGTAGGCACAT---GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTT 509 || | ||| || || ||||||| || |||||||||| ||| | ||||| ||||| Sbjct 51 ACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACTGGGGGTTCTTTT 110 Query 510 CACCTTTCCCTCACGGTACT 529 |||||||||||||||||||| Sbjct 111 CACCTTTCCCTCACGGTACT 130 >seq12061 Length=55105 Score = 80.6 bits (88), Expect = 1e-12 Identities = 80/104 (77%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 472 TTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTG 531 ||||| | ||||||||||| ||| || || ||||||||| || ||||| |||||| Sbjct 52273 TTTCATATTCTATTTCACTCTCCGATGGGAGTTCTTTTCACCCTTTCCTCATGGTACTAC 52214 Query 532 TCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTC 575 | | |||| ||||||| | |||||||||| ||| ||||||| Sbjct 52213 TTCACTATTGGTCACCCAAGAGTATTTAGCCTTGCAAGGTGGTC 52170 >seq14697 Length=37668 Score = 77.0 bits (84), Expect = 1e-11 Identities = 75/97 (77%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 468 ATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTA 527 ||||||| | | |||||||||||| | || ||| ||||||||| |||||||| |||| Sbjct 32094 ATGGTTTTATCTTCTATTTCACTCCATGATAGTGGTTCTTTTCACCCTTCCCTCATGGTA 32153 Query 528 CTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTT 564 | | | || | ||||||||| |||||||| | ||| Sbjct 32154 ATACTTCACTGTTGGTCACCAAAGAGTATTTTGCCTT 32190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1807568392960