Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq512363 129 1e-27 seq28274 80.6 5e-13 seq538379 77.0 6e-12 seq151655 77.0 6e-12 seq3135 73.4 8e-11 >seq512363 Length=306 Score = 129 bits (142), Expect = 1e-27 Identities = 134/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||| | || ||||||| |||||| ||| ||||||||||||||||| Sbjct 180 GGCATGGCTGGGTCAGGCTCTCGCCCATTGCCCAATATTCCCTACTGCTGCCTCCCGTAG 121 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||| || |||| ||||||| || ||||| | || |||||||| | ||| || Sbjct 120 GAGTCGGGCCCGTATCTCAGTGCCCGTGTGGGGGACCAGCCTCTCAGCTCCCCTAGTCAT 61 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCT 176 ||||| |||||| || ||| || |||||||| ||||| |||| | ||||||| Sbjct 60 CGTCGCCTTGGTAAGCCGTTACCTTACCAACTAGCTAATGACCCGCAACCCCATCT 5 >seq28274 Length=12189 Score = 80.6 bits (88), Expect = 5e-13 Identities = 77/99 (78%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 77 TCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGC 136 ||||||||| ||||| | ||| |||||| | || ||||| |||| | | |||||| || Sbjct 11133 TCAGTCCCAGTGTGGTTGATCATCCTCTCGGACCAGCTACTGATCATTGCCTTGGTAAGC 11192 Query 137 TATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 |||| ||||||||||| |||||| |||||||| || Sbjct 11193 TATTGCCTCACCAACTAGCTAATCAAATGCGAGCCCCTC 11231 >seq538379 Length=538 Score = 77.0 bits (84), Expect = 6e-12 Identities = 65/79 (82%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||||| |||| || |||| | || || || || ||||| ||| |||| |||| ||||||| Sbjct 397 TCAGGCTTTCGCCTATTGCGAAAAATTCCTCA-TGCTGACTCTCGTAAGAGTTTGGGCCG 339 Query 73 TGTCTCAGTCCCAATGTGG 91 ||||||||||||| ||||| Sbjct 338 TGTCTCAGTCCCAGTGTGG 320 >seq151655 Length=112 Score = 77.0 bits (84), Expect = 6e-12 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || ||||||||| ||| |||||| ||||||||||||| ||||| |||||| Sbjct 65 GCTGGATCGGGCTTTCCCCCACTGTCCAATATTCCCCACTGCTGCCCCCCGTGGGAGTCC 6 Query 67 GGGCC 71 ||||| Sbjct 5 GGGCC 1 >seq3135 Length=138032 Score = 73.4 bits (80), Expect = 8e-11 Identities = 66/82 (80%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 24 CCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCC 83 ||||||||| || || ||| |||||| ||||| ||||||| ||| | |||||||||||| Sbjct 56595 CCCATTGTGGAAAATTCCCGACTGCTATCTCCCATAGGAGTTTGG-CTGTGTCTCAGTCC 56537 Query 84 CAATGTGGCCGTTCAACCTCTC 105 |||||| | | ||| ||||| Sbjct 56536 CAATGTACCTGATCATTCTCTC 56515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 992889680640