Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq23000 122 2e-25 >seq23000 Length=38285 Score = 122 bits (134), Expect = 2e-25 Identities = 194/275 (71%), Gaps = 9/275 (3%) Strand=Plus/Minus Query 1 CGAGTCAATGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGG 60 || |||| ||||| || ||||||| |||||| | | |||| || ||| |||||| Sbjct 7564 CGGGTCAGTGTCCGAGATCATGTGTTGGGGTGAAGAGAGATGGGAAATTGGCGAGTTGGG 7505 Query 61 GAGAGTCCGACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATG-GGACC 119 ||||| ||| || || ||| || | || || || || |||| | ||||| Sbjct 7504 CTGAGTCGGACTCGGCGGTCCGAGTTGGGACTTGTGGGGTT-ATGTTGGGGGCACGGACC 7446 Query 120 TTGGTTACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGT--AAATAACA 177 ||||||| || |||| || ||||| || ||||| ||||| | | || |||| Sbjct 7445 CTGGTTACAGGATCGGCCTACCAAGGTGCGCCACAAGGGTTGTATATGGTGGAAATGG-- 7388 Query 178 ACAAAAAGGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTG 237 | ||||||||| ||||| |||||||| | |||| ||| || ||||||||||||| Sbjct 7387 ---ATAAGGATGGGAAAAATGGTAAATTGGTGAGGATTAGTGTGCCCGATGAATTTTCTG 7331 Query 238 GATTTGTGCAATCTGGATGCTGTGTGGAGATCTGA 272 | ||||| | |||||| ||||| |||||||| ||| Sbjct 7330 GCTTTGTTCGATCTGGCTGCTGGGTGGAGATTTGA 7296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 913331212640