Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq974 206 6e-51 seq464116 156 1e-35 seq384230 145 2e-32 seq19679 125 2e-26 seq60615 118 3e-24 seq304848 111 4e-22 seq374854 100 7e-19 seq18338 100 7e-19 seq349260 91.5 4e-16 seq29810 86.0 1e-14 seq240468 84.2 5e-14 seq415145 78.8 2e-12 seq316388 73.4 9e-11 seq33218 73.4 9e-11 >seq974 Length=77894 Score = 206 bits (228), Expect = 6e-51 Identities = 236/317 (74%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 20 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTAC 79 |||||||| |||||||||| ||||||||||| ||| || ||||||||||||||| | Sbjct 55192 GGCTAACTCTGTGCCAGCAGTCGCGGTAATACTGAGGATGCAAGCGTTATCCGGAATGAT 55133 Query 80 TGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACC 139 || |||||||| || |||||||| || |||||| | | ||| | ||||||||| Sbjct 55132 TGAGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTTGCCATCAAATCTCAGGGCTCAACC 55073 Query 140 CCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGT 199 | || || | |||||| | ||| |||| | | ||||||| |||||| | || Sbjct 55072 CTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAAGGAATTTCCGGT 55013 Query 200 GTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGAC 259 | || ||||||||||||||| || | | |||||| |||||| || ||||||| | Sbjct 55012 GGAGTGGTGAAATGCGTAGAGATCGAAAAGGACACCAACGGCGAAAGCACTTTGCTGGGC 54953 Query 260 TGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 319 | ||||||||| ||| ||||||| |||||||||| |||||| |||||| ||||| Sbjct 54952 CGACACTGACACTAAGGGACGAAAGCTAGGGGAGCAAATGGGATTAAATACCCCAGTAGT 54893 Query 320 CCACGCCGTAAACGATG 336 || | ||||||||||| Sbjct 54892 CCTAGTCGTAAACGATG 54876 >seq464116 Length=216 Score = 156 bits (172), Expect = 1e-35 Identities = 118/139 (85%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| ||| || |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 73 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 132 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 ||||||| |||||||||||||||||||| ||||| ||| ||||| |||||| || || Sbjct 133 GAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTTGTAAGTCTGACGT 192 Query 121 GAAAGGCTATGGCTCAACC 139 |||| | ||||||||| Sbjct 193 GAAATCCCCGGGCTCAACC 211 >seq384230 Length=165 Score = 145 bits (160), Expect = 2e-32 Identities = 113/135 (84%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 200 GTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGAC 259 ||||||||||||||| |||||| |||| || | |||||||| ||| || | | Sbjct 135 GTAGCGGTGAAATGCATAGATACGGTCCAGAACCCCGATTGCGAAGGCAGCTGACTAGGC 76 Query 260 TGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 319 ||| |||||| ||||||| ||| |||||||||||| |||||||||||||||||||||||| Sbjct 75 TGTTACTGACGCTGAGGCACGACAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGT 16 Query 320 CCACGCCGTAAACGA 334 ||||||||||||||| Sbjct 15 CCACGCCGTAAACGA 1 >seq19679 Length=43052 Score = 125 bits (138), Expect = 2e-26 Identities = 111/139 (80%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 || ||| |||| ||||||||| |||||||||||||||||||||| ||| || ||| Sbjct 39029 TGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGC 39088 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 |||||||||||| | ||||||||||| || |||||||| || ||||||| | || ||| Sbjct 39089 GTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAA 39148 Query 125 GGCTATGGCTCAACCCCGG 143 | | |||||||||| || Sbjct 39149 TCCCAGGGCTCAACCCTGG 39167 >seq60615 Length=7980 Score = 118 bits (130), Expect = 3e-24 Identities = 176/247 (71%), Gaps = 7/247 (3%) Strand=Plus/Minus Query 163 GGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATAT 222 |||||||| | || ||| | || | ||| | || |||| | ||| || | | |||| Sbjct 4775 GGGCTAGAATCCAATAGGAGTAACCAGTATTTCGAGAGTAGTGCTGATATACTTTGATAC 4716 Query 223 TAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAA 282 | | |||| |||| | ||| | || | || || | | | ||||||||||| |||| Sbjct 4715 TCGAAGGACTACCAATAGCGGAAGCAGGTTACTAGGTAGAGATTGACACTGAGGTACGAA 4656 Query 283 AGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACT 342 ||||| |||||||||||| ||||||||| ||||||||| ||||| |||||||||| | || Sbjct 4655 AGCGTAGGGAGCAAACAGAATTAGATACTCTGGTAGTCTACGCCCTAAACGATGAGTGCT 4596 Query 343 AGGTGTCGGGGCGCATA-AGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTG 401 || || |||| | || || | ||||||||||||||| | ||| |||| Sbjct 4595 AGAGCTC----TTCATATATTG--GAGGACTCTTAGCAAACGCAATAAGCACTCCGCCTG 4542 Query 402 GGGAGTA 408 || |||| Sbjct 4541 GGAAGTA 4535 >seq304848 Length=141 Score = 111 bits (122), Expect = 4e-22 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 219 ATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCT 278 ||||||| ||||| || | ||||||||| || | || |||||| || ||| Sbjct 12 ATATTAGAAGGAAGGCCGGCGGCGAAGGCAACTCTTTAGATCCAGACTGACGCTAAGGTA 71 Query 279 CGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 72 CGAAAGCGTGGGGAGCAAACGGGATTAGATACCCCAGTAGTCCACGCCGTAAACGATGA 130 >seq374854 Length=162 Score = 100 bits (110), Expect = 7e-19 Identities = 93/117 (79%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 292 AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGG 351 ||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||| Sbjct 1 AGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCTACTAGTTGTCGG 60 Query 352 GGCGCATAAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | ||| | ||| |||||| ||||| ||||| || ||||||||||| Sbjct 61 G--TTTTAATTAACTTGGTAACGCAGCTAACGCGTGAAGTAGACCGCCTGGGGAGTA 115 >seq18338 Length=40663 Score = 100 bits (110), Expect = 7e-19 Identities = 147/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| || |||||| | ||| |||||| |||||||| ||| || ||| |||||| Sbjct 22863 AAGCATCGACTAACTCTATACCAACAGCCGTGGTAATACAAAGGATGCAAGCAATATCCG 22804 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| | ||||||||||| || ||||||| || ||||||| | | ||| | | | Sbjct 22803 GAATGATTGGGCGTAAAGCGTATGTAGGTGACTTTTTAAGTCCGCCATCAAATCCCAGGA 22744 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 || ||||| || ||| | ||||| | ||| |||| | | |||| || |||||| Sbjct 22743 CTTAACCCTGGACATGCGGTAAAAACTACCAAGCTGGAGTAC-GTAGGGACATATGGAAT 22685 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGA 219 | | ||| ||| ||||||||||||| Sbjct 22684 TTCCGGTGAAGCAATGAAATGCGTAGA 22658 >seq349260 Length=153 Score = 91.5 bits (100), Expect = 4e-16 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 59 GCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAG 118 || ||||||||||||||| | |||||||||||||| || |||||| | |||| | Sbjct 150 GCGAGCGTTATCCGGAATGATTGGGCGTAAAGGGTCCGCAGGTGGCCCGGTCAGTCCGCT 91 Query 119 GTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGA 178 || |||| || |||||||||| || | || || || | ||||| |||| | | | Sbjct 90 GTCAAAGCCTGGGGCTCAACCCTGGAAAGGCGGCGGAGACCACCGGGCTTGAGTCCGGTA 31 Query 179 GGGGCAAGTGGAATTCCTAGTGTAGCGGTG 208 |||||| |||||||| ||| ||||||| Sbjct 30 GGGGCAGAGGGAATTCCCGGTGGAGCGGTG 1 >seq29810 Length=40436 Score = 86.0 bits (94), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 4/155 (3%) Strand=Plus/Minus Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244 || |||||| | || ||| | |||||| | |||| | | |||| | | | ||||||| Sbjct 22243 AGAGGAATTGCAAGAGTAAGGATGAAATCTTTTGATACTTGTAGGACCGCTAATGGCGAA 22184 Query 245 GGCGGC-TTGCTGGACTGTA-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGA 302 ||| | || | || | | |||||| ||||| || | |||| |||||| || |||| Sbjct 22183 GGCATCGTTCCAGG--TAAAGACTGACGTTGAGGGACGTAGGCGTTGGGAGCGAAAAGGA 22126 Query 303 TTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 |||||||||| |||||| |||| ||||||||||| Sbjct 22125 TTAGATACCCCTGTAGTCAACGCTGTAAACGATGA 22091 >seq240468 Length=127 Score = 84.2 bits (92), Expect = 5e-14 Identities = 85/107 (79%), Gaps = 4/107 (4%) Strand=Plus/Plus Query 302 ATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAG 361 ||||||||||||||||||||||||||||||||||| ||||| | || |||| | | Sbjct 1 ATTAGATACCCTGGTAGTCCACGCCGTAAACGATGGATACTCGCTG--CGGGCTAAAGAT 58 Query 362 TGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || ||| ||| | || || | |||||||| |||||||||||||| Sbjct 59 TG-TCC-GTGGCTTAGGGAAACCGATAAGTATCCCACCTGGGGAGTA 103 >seq415145 Length=180 Score = 78.8 bits (86), Expect = 2e-12 Identities = 65/78 (83%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAA-CTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCC 71 |||| ||||||| | |||||||||||||||||||| ||| || || |||||||||| Sbjct 103 AAGCATCGGCTAAACCCCGTGCCAGCAGCCGCGGTAAGACGGGGGATGCGAGCGTTATCC 162 Query 72 GGAATTACTGGGCGTAAA 89 ||||| | |||||||||| Sbjct 163 GGAATGATTGGGCGTAAA 180 >seq316388 Length=144 Score = 73.4 bits (80), Expect = 9e-11 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 280 GAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAAT 339 ||| || |||| |||||||||||||||||||||| |||||||| || | ||| ||||||| Sbjct 144 GAAGGCTTGGGTAGCAAACAGGATTAGATACCCTAGTAGTCCAAGCAGAAAATGATGAAT 85 >seq33218 Length=24738 Score = 73.4 bits (80), Expect = 9e-11 Identities = 58/70 (83%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 266 TGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 325 |||| |||||| ||||| ||||||||||| ||||||||||||| |||||||| | Sbjct 22702 TGACGCTGAGGGATGAAAGTCTGGGGAGCAAAACGGATTAGATACCCGTGTAGTCCAGAC 22643 Query 326 CGTAAACGAT 335 |||||||||| Sbjct 22642 CGTAAACGAT 22633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1196559358720