Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq514979 159 1e-36 seq517377 123 8e-26 seq410902 102 3e-19 seq279189 102 3e-19 seq1861 100 1e-18 seq229018 96.9 1e-17 seq21324 96.9 1e-17 seq60174 89.7 2e-15 seq30846 86.0 2e-14 seq473833 82.4 3e-13 seq5980 82.4 3e-13 seq991 80.6 9e-13 seq25087 78.8 3e-12 seq32768 77.0 1e-11 seq7079 75.2 4e-11 seq6453 75.2 4e-11 seq1013 75.2 4e-11 >seq514979 Length=315 Score = 159 bits (176), Expect = 1e-36 Identities = 159/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGG 410 ||||||||| ||| | |||||||| | |||||||||| ||||||| |||| | Sbjct 257 ATTTCACCGAGCCCCTCTCCGAGACAGCGCCCAAATCGTTACGCCTTTCGTGCGGGTCAG 198 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||| || Sbjct 197 AACTTACCTGACAATGAATTTCGCTACCTTAGGATCGTTATAGTTACGACCGCCGTTGAC 138 Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGG-TGTGCTCACGAGTCCTCTTAACCT 529 ||||||||| || || || || | | | | || | | ||| | |||||||| Sbjct 137 TGGGGCTTCGGTTGCCAGCTTCCCCCCTCTCAAGGAGGGGGCCACCAACTTCCTTAACCT 78 Query 530 TCCAGCACCGGGCAGGCGTCAGTCC 554 |||||||| ||||||||||||| || Sbjct 77 TCCAGCACTGGGCAGGCGTCAGCCC 53 >seq517377 Length=326 Score = 123 bits (136), Expect = 8e-26 Identities = 128/165 (78%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| |||| |||||||||||||||| ||| |||||||| || |||||| || Sbjct 30 TCGACTTGTTGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTACACTCTACAACTGATTCCC 89 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||| ||||||||||||||| ||||||| |||| ||||||| ||| | ||||||| Sbjct 90 GTCCAGCCTGAGGGAACCTTTGCACGCCTCCATTACTCTTTGGGA-GGCCTCTGCCCCAG 148 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCA 165 ||||| | || ||||| || ||||| | ||||| || || Sbjct 149 AGAAACTGTCTGCCTGGCACGGT-TCCAACGCCTATCATAGGGCA 192 >seq410902 Length=178 Score = 102 bits (112), Expect = 3e-19 Identities = 130/178 (73%), Gaps = 1/178 (1%) Strand=Plus/Plus Query 244 CCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC-GG 302 |||||||||||||||| | | | || ||||| | |||||| ||| ||||| | || Sbjct 1 CCACCTATCCTACACAGATTGGTTCAAAGTCCAATGCAAAGCTACAGTAAAGGTTCATGG 60 Query 303 GGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGC 362 ||||||| |||| |||||| | | ||||| | || | | ||| ||| | | | Sbjct 61 GGTCTTTCCGTCTAGCCGCGGGTAGATTGCATCATCACAAACATTTCAACTTCGCTGAGT 120 Query 363 CTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 420 || || ||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 121 CTCGGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 178 >seq279189 Length=136 Score = 102 bits (112), Expect = 3e-19 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 ||||||||| |||| |||| | | ||||||| || | | ||||||||||| Sbjct 136 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 77 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 || | || |||||||| ||| ||||||||| |||||||||||||||| ||||| | Sbjct 76 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 17 Query 420 GACAAGGAATTTCGCT 435 |||||||||||||||| Sbjct 16 GACAAGGAATTTCGCT 1 >seq1861 Length=58045 Score = 100 bits (110), Expect = 1e-18 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||| ||| || |||| |||||||||||| |||||||| |||||||||||||||||| Sbjct 33975 TCGTTATGCCTTTTGTGCGGGTCGGAACTTATCCGACAAGAAATTTCGCTACCTTAGGAC 33916 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTAC 485 |||||||||| | ||| || || |||| ||| |||| Sbjct 33915 CATTATAGTTACAGCTGCCATTCACCGGGGTTTCGGTTAC 33876 >seq229018 Length=125 Score = 96.9 bits (106), Expect = 1e-17 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||||| |||| ||||| | | ||||||| || | | ||||||| | | Sbjct 5 CGGGGTCTTTCCGTCTAACCGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCTG 64 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 || ||| | ||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 65 AGCATGTCCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 124 Query 420 G 420 | Sbjct 125 G 125 >seq21324 Length=36789 Score = 96.9 bits (106), Expect = 1e-17 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 407 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGT 466 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 29877 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGT 29936 Query 467 TTACTGGG 474 | || ||| Sbjct 29937 TCACCGGG 29944 >seq60174 Length=561 Score = 89.7 bits (98), Expect = 2e-15 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 || |||| || ||| |||| ||| |||||| | || |||||||||||||||||||||| Sbjct 374 TCATTACACCTTTCATGCAAGTCAAAACTTATCTGATAAGGAATTTCGCTACCTTAGGAC 315 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||| | || |||| |||| ||||| Sbjct 314 TGTTATAGTTACGATCGTCGTTCCCTGGAGCTTC 281 >seq30846 Length=10447 Score = 86.0 bits (94), Expect = 2e-14 Identities = 124/174 (71%), Gaps = 1/174 (1%) Strand=Plus/Minus Query 284 GCTATAGTGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTC 342 |||||||| ||| | | ||||||| |||| || | || || ||||||| || Sbjct 9335 GCTATAGTAAAGCTGCATAGGGTCTTCCCGTCTACCCACACGTAAACCGCATCTTCACGG 9276 Query 343 GTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTG 402 || | ||||||||| | | | ||||||||||| || | |||| | |||| || Sbjct 9275 CTAATTCAATTTCACTGAGATACTATATGAGACAGCAGAGGCATTATTACTCTATTCATG 9216 Query 403 CAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTA 456 |||| | | | ||| | | ||||||||||||||||||||| || ||||||||| Sbjct 9215 CAGGACCGCATTTAACGGCCAAGGAATTTCGCTACCTTAGAATCCTTATAGTTA 9162 >seq473833 Length=227 Score = 82.4 bits (90), Expect = 3e-13 Identities = 143/206 (69%), Gaps = 8/206 (4%) Strand=Plus/Minus Query 111 ACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTT 170 ||| ||||||| |||||||||| ||| |||||| | | | ||| | | ||| Sbjct 226 ACCACCCCAGTCAAACTACCCAGCAGCCACTGTTCTCTA---AGAAACTTAGA----GTT 174 Query 171 AGATATCCACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCC 230 || ||| || | || | ||||||||||| | |||||||| |||||| | Sbjct 173 AGGCATCAGGCACAGCAAGGGCGGTATTTCAACGTTGGCTCCACAAGACCTAGCGGCCCT 114 Query 231 GCATCATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAG 290 || || | ||||| ||||| ||||||| || | ||| | ||||| ||| |||||| Sbjct 113 GCTTCGACGCCTCCCGCCTATGCTACACATACTGAACCCACCACCAATGGCAACCTATAG 54 Query 291 TGAAGGT-CCCGGGGTCTTTTCGTCC 315 | ||||| | |||||||||| ||||| Sbjct 53 TAAAGGTGCACGGGGTCTTTCCGTCC 28 >seq5980 Length=85990 Score = 82.4 bits (90), Expect = 3e-13 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 394 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAG 453 || ||||||| | | | ||||||| |||||||||||||| || ||||||| ||||||| Sbjct 1621 CCTTTCGTGCGGTTTGAAACTTACATGACAAGGAATTTCGTTATCTTAGGACTGTTATAG 1562 Query 454 TTACCACCGCCGTTTACTGGGGCTT 478 ||| | | ||||| |||||||||| Sbjct 1561 TTATGATCCCCGTTCACTGGGGCTT 1537 >seq991 Length=20145 Score = 80.6 bits (88), Expect = 9e-13 Identities = 78/99 (79%), Gaps = 1/99 (1%) Strand=Plus/Plus Query 388 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGG 447 |||| | | || ||||| | | |||| | | || ||||||||||||||||||||||| Sbjct 19546 GTTATGACTTTTGTGCAAGCTGAAACTCATCGGAAAAGGAATTTCGCTACCTTAGGAT-T 19604 Query 448 TTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACC 486 || ||||||| || ||||| | |||||||||||| ||| Sbjct 19605 TTGTAGTTACAGCCACCGTTCAATGGGGCTTCAATAACC 19643 >seq25087 Length=936 Score = 78.8 bits (86), Expect = 3e-12 Identities = 46/48 (96%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCG 433 |||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct 674 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCG 721 >seq32768 Length=538 Score = 77.0 bits (84), Expect = 1e-11 Identities = 77/99 (78%), Gaps = 1/99 (1%) Strand=Plus/Plus Query 388 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGG 447 |||| | | || ||||| | | |||| | | || ||||||||||||||||||||||| Sbjct 342 GTTATGACTTTTGTGCAAGCTGAAACTCATCTGAAAAGGAATTTCGCTACCTTAGGAT-T 400 Query 448 TTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACC 486 || ||||||| || || || | |||||||||||| ||| Sbjct 401 TTGTAGTTACAGCCACCATTCAATGGGGCTTCAATAACC 439 >seq7079 Length=28176 Score = 75.2 bits (82), Expect = 4e-11 Identities = 95/131 (73%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 349 CAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTC 408 ||||||||| | ||| | |||||||||| | | |||||| ||||| |||| | | Sbjct 23804 CAATTTCACTGAGCCAATCATTGAGACAGCTGTTGTATCGTTAAATCATTCATGCAAGAC 23745 Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468 | | ||| | | ||||| ||| ||||||||||||| |||| |||| ||||| || Sbjct 23744 CGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTTATCGTTAAGGCCGCCATTG 23685 Query 469 ACTGGGGCTTC 479 | ||||| ||| Sbjct 23684 ATTGGGGTTTC 23674 >seq6453 Length=77471 Score = 75.2 bits (82), Expect = 4e-11 Identities = 60/71 (85%), Gaps = 1/71 (1%) Strand=Plus/Minus Query 388 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGG 447 |||| ||| |||||| ||||| |||||||||| |||||||||||| |||||||| || | Sbjct 50333 GTTATGCCTTTCGTGTAGGTCAGAACTTACCCAACAAGGAATTTCACTACCTTAAGACCG 50274 Query 448 TT-ATAGTTAC 457 || | |||||| Sbjct 50273 TTAAGAGTTAC 50263 >seq1013 Length=44103 Score = 75.2 bits (82), Expect = 4e-11 Identities = 94/128 (73%), Gaps = 2/128 (2%) Strand=Plus/Minus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGG 410 |||| |||| | || | ||||| ||| | | | |||||||| ||||| ||||| | Sbjct 7317 ATTTTACCGAGTCTCTCTTTGAGGCAGT--GTAAATTGTTACGCCTTTCGTTCAGGTTGA 7260 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||| || ||||||||||| ||||||| | ||| |||||| |||||| || Sbjct 7259 AACTTACCTGATAAGGAATTTCGGTACCTTATAACCGTTGTAGTTATGGTTGCCGTTCAC 7200 Query 471 TGGGGCTT 478 ||| ||| Sbjct 7199 CGGGACTT 7192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1693004199040