Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Betula_20nana_20[genbank_20GCA_5F000327005.1_202012-12-03] 551,915 sequences; 564,011,153 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq449969 89.7 7e-13 seq444547 87.8 2e-12 >seq449969 Length=203 Score = 89.7 bits (98), Expect = 7e-13 Identities = 71/83 (86%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 142786 CATCTTC-GGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAAC 142843 || |||| |||| |||||||||| ||| |||||| ||||| ||||| ||||| |||||| Sbjct 121 CAACTTCTGGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAAC 180 Query 142844 GGTTCGAGTCCGTTATTCTCCAC 142866 ||||||| |||||||| |||||| Sbjct 181 GGTTCGACTCCGTTATCCTCCAC 203 >seq444547 Length=199 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 142792 CGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAG 142851 ||||| |||||||||| ||| ||||| ||||||||||||||||| ||| |||||||| Sbjct 91 CGGGGGATTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGAT 150 Query 142852 TCCGTTATTCTCCACCAA 142869 |||| || ||||||||| Sbjct 151 CCCGTCATCCTCCACCAA 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686688866195400