Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Boechera_20stricta_20[genbank_20GCA_5F002079875.1_202017-04-05] 1,944 sequences; 188,794,588 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq1817 89.7 2e-16 seq672 89.7 2e-16 seq1018 75.2 5e-12 >seq1817 Length=49288 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| |||||||||| |||||||||||| |||| |||||||||||||| Sbjct 36174 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 36116 >seq672 Length=7828947 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| |||||||||| |||||||||||| |||| |||||||||||||| Sbjct 3725394 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 3725336 >seq1018 Length=1246924 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| |||||||||| || ||||||||| |||| | ||||||||||| Sbjct 812425 GGAAAAGAAACTAACAAGGATTCCCTTAGCAACGGCGAGCGAACCAGAAAGAGCCCAGC 812367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230395800960