Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq16 475 1e-131 seq4 475 1e-131 seq9 462 7e-128 seq1375 412 1e-112 seq1374 197 4e-48 seq12 187 7e-45 seq7 167 7e-39 seq2 107 6e-21 seq13 104 7e-20 seq6 102 2e-19 seq3 98.7 3e-18 seq107 77.0 1e-11 seq79 77.0 1e-11 >seq16 Length=39632211 Score = 475 bits (526), Expect = 1e-131 Identities = 406/497 (82%), Gaps = 3/497 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 8765396 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 8765337 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 8765336 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 8765277 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | || |||||| || | ||||||| ||||||| ||||||||| Sbjct 8765276 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 8765219 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || ||||||||||||||||||||||||||||||||| | |||||||| Sbjct 8765218 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 8765159 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || | || |||| || || || | |||||||||||| || ||||||||||||| ||| Sbjct 8765158 CACCGTTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 8765099 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 8765098 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 8765039 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| |||||||| ||| || ||| ||| || |||||||||||||| Sbjct 8765038 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 8764979 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 8764978 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 8764919 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 8764918 CGGTGAATTCGTTCCCG 8764902 Score = 77.0 bits (84), Expect = 1e-11 Identities = 80/103 (78%), Gaps = 3/103 (3%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGG--GGACCCGCACAAGCGGTGGAGCATGTGG 64 ||||||| ||||||| ||||| |||||||| || | | ||| || ||||||| || || Sbjct 14451153 CGCAAGGCTGAAACTTAAAGGCATTGACGGAAGGGCAC-CACCAGGAGTGGAGCCTGCGG 14451211 Query 65 TTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT 107 |||||| || |||| || ||| ||||||||||| ||||| Sbjct 14451212 CTTAATTTGACTCAACACGGGGAAACTTACCAAATCCAGACAT 14451254 Score = 77.0 bits (84), Expect = 1e-11 Identities = 80/103 (78%), Gaps = 3/103 (3%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGG--GGACCCGCACAAGCGGTGGAGCATGTGG 64 ||||||| ||||||| |||||||||||||| || | | ||| || ||||||| || || Sbjct 37833216 CGCAAGGCTGAAACTGAAAGGAATTGACGGAAGGGCAC-CACCAGGAGTGGAGCCTGCGG 37833158 Query 65 TTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT 107 |||||| || |||| || ||| ||||||| ||| ||||| Sbjct 37833157 CTTAATTTGACTCAACACGGGGAAACTTACCAGGTCTAGACAT 37833115 >seq4 Length=41855496 Score = 475 bits (526), Expect = 1e-131 Identities = 406/497 (82%), Gaps = 3/497 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 22275490 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 22275549 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 22275550 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 22275609 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | || |||||| || | ||||||| ||||||| ||||||||| Sbjct 22275610 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 22275667 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || ||||||||||||||||||||||||||||||||| | |||||||| Sbjct 22275668 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 22275727 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || | || |||| || || || | |||||||||||| || ||||||||||||| ||| Sbjct 22275728 CACCGTTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 22275787 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 22275788 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 22275847 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| |||||||| ||| || ||| ||| || |||||||||||||| Sbjct 22275848 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 22275907 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 22275908 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 22275967 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 22275968 CGGTGAATTCGTTCCCG 22275984 Score = 147 bits (162), Expect = 7e-33 Identities = 96/106 (91%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 10747064 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 10747123 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACA 106 |||||||||||||| |||| |||||||||||||||| ||||||| Sbjct 10747124 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACA 10747169 >seq9 Length=46179939 Score = 462 bits (512), Expect = 7e-128 Identities = 403/497 (81%), Gaps = 3/497 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 9429721 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 9429662 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 9429661 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 9429602 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | || |||||| || | ||||||| ||||||| ||||||||| Sbjct 9429601 TTGAAAGAGAGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 9429544 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || |||||||||||||||||||||||| |||||||| | |||||||| Sbjct 9429543 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGTGCAACCCTCGTGTTTAGTTGC 9429484 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || | || |||| || || || | |||||||||||| || ||||||||||||| ||| Sbjct 9429483 CACCGTTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 9429424 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 9429423 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 9429364 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| |||||||| ||| || ||| | | || |||||||||||||| Sbjct 9429363 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACTCCAAAGACCCGTCCTCAGTTCGGATTG 9429304 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| |||||||||||||||| | |||| ||| | Sbjct 9429303 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCTCCGGTCAGCCATACGG 9429244 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 9429243 CGGTGAATTCGTTCCCG 9429227 Score = 75.2 bits (82), Expect = 3e-11 Identities = 73/92 (79%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGG--GGACCCGCACAAGCGGTGGAGCATGTGG 64 ||||||| |||||||||||||||||||||| || | | || ||| ||||||| || || Sbjct 16852815 CGCAAGGCTGAAACTCAAAGGAATTGACGGAAGGGCAC-CATAAGGAGTGGAGCCTGCGG 16852873 Query 65 TTTAATTCGAAGCAACGCGAAGAACCTTACCA 96 |||||| || |||| || ||| ||||||| Sbjct 16852874 CTTAATTTGACTCAACACGGGGAAACTTACCA 16852905 >seq1375 Length=152860 Score = 412 bits (456), Expect = 1e-112 Identities = 390/497 (78%), Gaps = 18/497 (4%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct 100670 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAG--- 100726 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 || |||| |||||| ||||||||| |||||||| | || |||| Sbjct 100727 ------------GATGCAAAGCGAAGCACCTTACCAGGGCTTGACATGCCGCGAATCCTC 100774 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | ||||| ||| || | ||||||| ||||||| ||||||||| Sbjct 100775 TTGAAAGAGAGGGGT-GCCTTC-GGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 100832 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || ||||||||||||||||||||||||||||||||| | |||||||| Sbjct 100833 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 100892 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || | || |||| || || || | |||||||||||| || ||||||||||||| ||| Sbjct 100893 CACCGTTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 100952 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 100953 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 101012 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| |||||||| ||| || ||| ||| || |||||||||||||| Sbjct 101013 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 101072 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 101073 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 101132 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 101133 CGGTGAATTCGTTCCCG 101149 Score = 412 bits (456), Expect = 1e-112 Identities = 390/497 (78%), Gaps = 18/497 (4%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct 135221 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAG--- 135165 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 || |||| |||||| ||||||||| |||||||| | || |||| Sbjct 135164 ------------GATGCAAAGCGAAGCACCTTACCAGGGCTTGACATGCCGCGAATCCTC 135117 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | ||||| ||| || | ||||||| ||||||| ||||||||| Sbjct 135116 TTGAAAGAGAGGGGT-GCCTTC-GGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 135059 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || ||||||||||||||||||||||||||||||||| | |||||||| Sbjct 135058 CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 134999 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || | || |||| || || || | |||||||||||| || ||||||||||||| ||| Sbjct 134998 CACCGTTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGAT 134939 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 134938 GACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGAC 134879 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| |||||||| ||| || ||| ||| || |||||||||||||| Sbjct 134878 AAAGGGTCGCGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 134819 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| ||||||||||||||||| | |||| ||| | Sbjct 134818 CAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG 134759 Query 480 CGGTGAATACGTTCCCG 496 |||||||| |||||||| Sbjct 134758 CGGTGAATTCGTTCCCG 134742 >seq1374 Length=221853 Score = 197 bits (218), Expect = 4e-48 Identities = 186/236 (79%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 ||||||| |||| | || ||||||||||||||| |||||||| || |||| |||||||| Sbjct 70205 GACTGCCAGTGATATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATG 70146 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAA 386 ||||| |||||||||||||||||| | ||||| ||| ||| | | | ||| | Sbjct 70145 GGCTGGGCCACACACGTGCTACAATGGCAATTACAATGGGAAGCAAGGCTGTAAGGCGGA 70086 Query 387 GCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGC 446 || ||| || |||| | ||||||||||||||| ||||||||||| | |||||| Sbjct 70085 GCGAAT-CCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAGT 70027 Query 447 TGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGCTCCCT 502 |||||||||||||||||| ||||||||||| ||||||||| || |||| |||| Sbjct 70026 TGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCT 69971 Score = 181 bits (200), Expect = 3e-43 Identities = 182/234 (78%), Gaps = 17/234 (7%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| ||||||||||||||||||||||| || |||||||||||||||||| Sbjct 70740 TACGGTCGCAAGACCGAAACTCAAAGGAATTGACGGGGGCCTGCACAAGCGGTGGAGCAT 70681 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| ||||||| |||||||||||| ||||||| | ||| | Sbjct 70680 GTGGTTTAATTCGATACAACGCGCAGAACCTTACCAGCCCTTGACA---TATGAAC---- 70628 Query 121 TAGAGATAGAGGTTTCCCCTTCGG---GGGACAGAGT----GACAGGTGATGCATGGTTG 173 |||| | | ||| ||| || || || | ||||||| ||||||| || Sbjct 70627 --GAGA-AACCCTATCCTTAACGGGATGGTACTGACTTTCATACAGGTGCTGCATGGCTG 70571 Query 174 TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227 ||||||||||||||||||||||||| |||||||||| |||||||| |||||| Sbjct 70570 TCGTCAGCTCGTGTCGTGAGATGTTTGGTTAAGTCCTATAACGAGCGAAACCCT 70517 >seq12 Length=46391361 Score = 187 bits (206), Expect = 7e-45 Identities = 164/203 (81%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 286 GAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGC 345 |||||||||| ||| |||||||| ||||||||||||||||| ||||| |||||||||| Sbjct 11860509 GAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGC 11860568 Query 346 TACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT 405 |||||||| | |||||||| |||| |||||||| ||| || ||| ||| || Sbjct 11860569 TACAATGGCCGGGACAAAGGGTCGCGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGT 11860628 Query 406 TCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGT 465 |||||||||||||| || |||||||||| || ||||||| ||||||||||||||||| Sbjct 11860629 CCTCAGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGC 11860688 Query 466 AGATCAG-CATGCTACGGTGAAT 487 | |||| ||| | |||||||| Sbjct 11860689 CGGTCAGCCATACGGCGGTGAAT 11860711 Score = 89.7 bits (98), Expect = 2e-15 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||||| |||||| | ||||||||||||||||||||||||| |||||||||| ||| Sbjct 27876570 ACAGGTGCTGCATGACTCTCGTCAGCTCGTGTCGTGAGATGTTTGGTTAAGTCCTATAAC 27876511 Query 216 GAGCGCAACCCT 227 ||||| |||||| Sbjct 27876510 GAGCGAAACCCT 27876499 >seq7 Length=43258566 Score = 167 bits (184), Expect = 7e-39 Identities = 127/150 (85%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 177 TCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAG 236 |||||||||| ||| || |||||||||||| |||||||||||||||||||| | |||| Sbjct 3429279 TCAGCTCGTGCCGTAAGGTGTTGGGTTAAGCCCCGCAACGAGCGCAACCCTCGTGTTTAG 3429220 Query 237 TTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGG 296 |||||| | || |||| || || || | |||||||||||| || ||||||||||||| Sbjct 3429219 TTGCCACCGTTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGA 3429160 Query 297 GGACGACGTCAAATCATCATGCCCCTTATG 326 ||| |||||||| ||||||||||||||||| Sbjct 3429159 GGATGACGTCAAGTCATCATGCCCCTTATG 3429130 >seq2 Length=31488241 Score = 107 bits (118), Expect = 6e-21 Identities = 126/171 (74%), Gaps = 12/171 (7%) Strand=Plus/Plus Query 82 CGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAGAGGTTTCCCCTT 141 ||||||||||||||| |||||||| |||| ||||| | | ||||| | | Sbjct 9638832 CGAAGAACCTTACCAGGGATTGACATCTCCTGAATCCTCTTAAAAGAGAGGGGTAC---- 9638887 Query 142 CGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGG 201 | ||||| |||||| || ||| ||||||||||||||| ||| | ||||||| Sbjct 9638888 --GTGGACA------CAGGTGGTGTGTGGCTGTCGTCAGCTCGTGCCGTAAAGTGTTGGG 9638939 Query 202 TTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTT 252 ||||||||| |||||||| ||||||| | | || | ||||| |||| |||| Sbjct 9638940 TTAAGTCCCACAACGAGCACAACCCTCATGTTTGGCTGCCAACATTGAGTT 9638990 >seq13 Length=54295181 Score = 104 bits (114), Expect = 7e-20 Identities = 125/171 (73%), Gaps = 12/171 (7%) Strand=Plus/Plus Query 82 CGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAGAGGTTTCCCCTT 141 ||||||||||||| | |||||||| |||| ||||| || | ||||| | | Sbjct 7815375 CGAAGAACCTTACGAGGACTTGACATGTCCTGAATCCTCTTGAAAAAGAGGGGTGC---- 7815430 Query 142 CGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGG 201 | ||||| || ||| ||||||| ||||||||||||||| || || ||||||| Sbjct 7815431 --GTGGACAAAG------GTGGTGCATGGCTGTCGTCAGCTCGTGCTGTAAGGTGTTGGG 7815482 Query 202 TTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTT 252 |||| |||||||| ||| ||||||| | | || ||||||| | || |||| Sbjct 7815483 TTAACTCCCGCAATCAGCACAACCCTCATGTTTGGTTGCCAACGTTGAGTT 7815533 Score = 77.0 bits (84), Expect = 1e-11 Identities = 82/106 (77%), Gaps = 3/106 (3%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGG--GGACCCGCACAAGCGGTGGAGCATGTGG 64 ||||||| ||||||| |||||||||||||| |||| | ||| || ||||||| || || Sbjct 52691046 CGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGACAC-CACCAGGAGTGGAGCCTGCGG 52691104 Query 65 TTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCT 110 |||||| || |||| || ||| ||||||| || ||||| || Sbjct 52691105 CTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATACT 52691150 Score = 75.2 bits (82), Expect = 3e-11 Identities = 73/92 (79%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGG--GGACCCGCACAAGCGGTGGAGCATGTGG 64 ||||||| ||||||| |||||||||||||| || | | ||| || ||||||| || || Sbjct 13032211 CGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCAC-CACCAGGAGTGGAGCCTGCGG 13032269 Query 65 TTTAATTCGAAGCAACGCGAAGAACCTTACCA 96 |||||| || |||| ||| ||| ||||||| Sbjct 13032270 CTTAATTTGACTCAACACGAGGAAACTTACCA 13032301 >seq6 Length=47127078 Score = 102 bits (112), Expect = 2e-19 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 271 GCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTT 330 |||||||| || ||||||||||||| ||| |||||||| ||||| ||||||||||| | | Sbjct 34119376 GCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCGTGCCCCTTATGCTCT 34119435 Query 331 GGGCTACACACGTGCTACA 349 |||| |||||||||||||| Sbjct 34119436 GGGCGACACACGTGCTACA 34119454 Score = 89.7 bits (98), Expect = 2e-15 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 318 CCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCG 377 ||||||||| ||||| ||||||||||||||||| | |||||||| |||| ||| Sbjct 34118844 CCCCTTATGCCTTGGGTGTCACACGTGCTACAATGGCCGGGACAAAGGGTCGCGATCCCG 34118903 Query 378 CGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAAC 431 ||||| ||| || ||| ||| || |||||||||||||| || ||||||| Sbjct 34118904 CGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTGCAGGCTGCAAC 34118957 >seq3 Length=51870232 Score = 98.7 bits (108), Expect = 3e-18 Identities = 112/148 (76%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 330 TGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACC-GCGAGGTCAAGC 388 || || ||||||||||||||||| | | ||||| ||| ||| | | |||| || Sbjct 26027774 TGAGCCACACACGTGCTACAATGAAAATTACAATGGGAAGCAAGGGTTGTAAGGTGGAGT 26027715 Query 389 AAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTG 448 ||||| || ||| ||||||||||||||| |||| |||||| | |||||| || Sbjct 26027714 GAATCCGGAAAGATTGC-CTCAGTTCGGATTGTTCTCTGTAACTCGGGAACATGAAGTTG 26027656 Query 449 GAATCGCTAGTAATCGTAGATCAGCATG 476 |||||||||||||||| |||||||||| Sbjct 26027655 GAATCGCTAGTAATCGCGGATCAGCATG 26027628 Score = 77.0 bits (84), Expect = 1e-11 Identities = 80/103 (78%), Gaps = 3/103 (3%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGG--GGACCCGCACAAGCGGTGGAGCATGTGG 64 ||||||| ||||||| |||||||||||||| || | | ||| || ||||||| || || Sbjct 49971085 CGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCAC-CACCAGGAGTGGAGCCTGCGG 49971027 Query 65 TTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT 107 |||||| || |||| || ||| ||||||| ||| ||||| Sbjct 49971026 CTTAATTTGACTCAACACGGGGAAACTTACCAGATCCAGACAT 49970984 >seq107 Length=508440 Score = 77.0 bits (84), Expect = 1e-11 Identities = 80/103 (78%), Gaps = 3/103 (3%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGG--GGACCCGCACAAGCGGTGGAGCATGTGG 64 ||||||| ||||||| |||||||||||||| || | | ||| || ||||||| || || Sbjct 332487 CGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCAC-CACCAGGAGTGGAGCCTGCGG 332429 Query 65 TTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT 107 |||||| || |||| | |||| ||||||| ||| ||||| Sbjct 332428 CTTAATTTGACTCAACACAGAGAAACTTACCAGGTCTAGACAT 332386 >seq79 Length=665121 Score = 77.0 bits (84), Expect = 1e-11 Identities = 80/103 (78%), Gaps = 3/103 (3%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGG--GGACCCGCACAAGCGGTGGAGCATGTGG 64 ||||||| ||||||| |||||||||||||| || | | ||| || |||||||||| || Sbjct 493894 CGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCAC-CACCAGGAGTGGAGCATGCGG 493952 Query 65 TTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT 107 |||||| || |||| || ||| ||||||| || ||||| Sbjct 493953 CTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACAT 493995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503979304960