Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20napus_20[refseq_20GCF_5F000686985.1_202014-05-15] 1,376 sequences; 930,507,853 total letters Query= NC_024361.1 Length=38392 Score E Sequences producing significant alignments: (Bits) Value seq137 361 1e-95 >seq137 Length=409738 Score = 361 bits (400), Expect = 1e-95 Identities = 593/842 (70%), Gaps = 16/842 (2%) Strand=Plus/Plus Query 20878 TCATCAAAGACATAAATCTCTTTCGTCGTGTCATTTATC-AACGAACAACACAAAGCGGT 20936 ||||| || |||||||| |||| | | | | | | | || |||||| ||| || || Sbjct 12773 TCATCGAATACATAAATAG-TTTCATTCTTTAAATCAACTAAAGAACAAGTCAATGCAGT 12831 Query 20937 TGGATCGTGAGTAAAACCAAAGTCAAGACCGATACATAACTTATTAGCTGAATCTCGTAG 20996 |||||||| ||| |||||||||| ||||| | | |||| || | | |||| | Sbjct 12832 TGGATCGTTCGTATAACCAAAGTCGAGACCAAAAGC--ACTTTGTACATCTTT-TCGTTG 12888 Query 20997 CAAT---TCATCCTTATCGAAATCCTTGACGGTCACGTTCTCATAGATTAAACCTTCAGC 21053 | ||||| |||| || || || | ||| ||||| | | ||| ||||| Sbjct 12889 TCTTATCTCATCAATATCAAAGTCTCGTACTTGGAAGTTTTCATATACAAGACCATCAGC 12948 Query 21054 AACTCCCCATTCACCATCACAAACGATTCTCGCACGCCTTGGATTTGTGTGATACAAGTC 21113 ||| |||||||| ||||||||||||||||| ||||| ||||| || | ||| || Sbjct 12949 AACGCCCCATTCGCCATCACAAACGATTCTTGCACGTCTTGGGTTCTTAGTATATAAACT 13008 Query 21114 CTCATAGCGCTTAATATCGACTTCATCAAGCCACTCATTGCATTTGTAAGTGGTTGTAGT 21173 |||||| || |||| |||||| ||||||||||||||||| ||||| || ||| Sbjct 13009 CTCATAACGTGCTCTATCCTGTTCATCTAGCCACTCATTGCATTTATAAGTAGTAGTAAA 13068 Query 21174 AGCGAATGTATCAGCTCGGCTAGTCT--CTTCATCAAAGAACACACGTTTGAGCCAGTGC 21231 ||||| || ||| | ||| || | ||||||||||||| | ||| ||||| || Sbjct 13069 GGCGAACGTGTCA--TAAGCTTGTGTAGCTTCATCAAAGAAATAAGATTTAAGCCAATGG 13126 Query 21232 CTCTCATTCCACGGGTTAAATGTGACTGTGATTTGTTTAAAGAAATCAGGTACATCTAGG 21291 | ||| |||| |||||||| || |||||||||||||||||||| ||||| |||| | Sbjct 13127 TTTTCACTCCAAGGGTTAAAAGTAACTGTGATTTGTTTAAAGAAGTCAGGAGCATCAAAA 13186 Query 21292 CTACCACGGATTGACTCAACTACTGTACTGAACTTGTCTTCAGTC-TCAATTTGATATGC 21350 |||||| || || ||||| ||||| ||||| | || ||| || |||| || || Sbjct 13187 GAACCACGAATAGATTCAACAACTGTTTCAAACTTATGTT-GGTCTTCTATTTCGTAAGC 13245 Query 21351 TTCCTCAAACCATGCCCAACAAAGACTGCCGACATCGACCGTGATAGATGTGATTTTGAG 21410 |||||||||||| ||||| || | | | || ||||| || || |||||||| ||||| | Sbjct 13246 TTCCTCAAACCAAGCCCAGCACAAATTACCCACATCAACAGTAATAGATGTTATTTTCAA 13305 Query 21411 TTCATCATCCAAACCACGGAATAGGATTTTTTGACCAGTCGCTTTTACAGTTATTTCAGG 21470 | |||||| || || || || | || || || ||||| | ||| ||||| || || Sbjct 13306 TGGATCATCTAATCCTCGAAACAATATCTTCTGTCCAGTAGGTTTATATGTTATCTCTGG 13365 Query 21471 CAAAGACTCGTTAAATTTAAACAAATGAGTCACACCCAACACATTACACGCCCATTTAAA 21530 || ||||| || || ||||| | | || ||||| ||| |||||||| || Sbjct 13366 CATTGACTCATTGAACTTAAATTGGTCTTTTACTCCCAATCTGTTAATGGCCCATTTTAA 13425 Query 21531 ATCCGTATAAGTTGATTGCTTGTTGGTATTCGAGTATCTACGAATAACAAGCAAGTTGGC 21590 ||| || ||| |||||||| ||||| ||||||||||||| || || | || || Sbjct 13426 ATCAGTGTAACAAGATTGCTTTAATGTATTGGAGTATCTACGAACCACTAGGAGATTAGC 13485 Query 21591 CCAGGGATACTTCAAAAGACGGATAACATAATTCAAAGCGGTTGTCTTGGACTTCTTCGA 21650 |||||| |||| || | || |||| | || || | ||||| || |||||||| || Sbjct 13486 CCAGGGGTACTGCATGATTCGTTTAACGAAGTTTAATACAGTTGTTTTAGACTTCTTAGA 13545 Query 21651 ACCACGGGAACCTTTTACAACACGATAAAGATTTCTTG-AGCGCCAGAACTGTCCGTATC 21709 |||||| |||||||| ||| | ||| | | |||||| | ||||||| | ||||| Sbjct 13546 ACCACGAGAACCTTTGCAAACTCTATAGA-AGTTCTTGCAATGCCAGAAACGATTGTATC 13604 Query 21710 CA 21711 || Sbjct 13605 CA 13606 Score = 361 bits (400), Expect = 1e-95 Identities = 593/842 (70%), Gaps = 16/842 (2%) Strand=Plus/Plus Query 20878 TCATCAAAGACATAAATCTCTTTCGTCGTGTCATTTATC-AACGAACAACACAAAGCGGT 20936 ||||| || |||||||| |||| | | | | | | | || |||||| ||| || || Sbjct 55731 TCATCGAATACATAAATAG-TTTCATTCTTTAAATCAACTAAAGAACAAGTCAATGCAGT 55789 Query 20937 TGGATCGTGAGTAAAACCAAAGTCAAGACCGATACATAACTTATTAGCTGAATCTCGTAG 20996 |||||||| ||| |||||||||| ||||| | | |||| || | | |||| | Sbjct 55790 TGGATCGTTCGTATAACCAAAGTCGAGACCAAAAGC--ACTTTGTACATCTTT-TCGTTG 55846 Query 20997 CAAT---TCATCCTTATCGAAATCCTTGACGGTCACGTTCTCATAGATTAAACCTTCAGC 21053 | ||||| |||| || || || | ||| ||||| | | ||| ||||| Sbjct 55847 TCTTATCTCATCAATATCAAAGTCTCGTACTTGGAAGTTTTCATATACAAGACCATCAGC 55906 Query 21054 AACTCCCCATTCACCATCACAAACGATTCTCGCACGCCTTGGATTTGTGTGATACAAGTC 21113 ||| |||||||| ||||||||||||||||| ||||| ||||| || | ||| || Sbjct 55907 AACGCCCCATTCGCCATCACAAACGATTCTTGCACGTCTTGGGTTCTTAGTATATAAACT 55966 Query 21114 CTCATAGCGCTTAATATCGACTTCATCAAGCCACTCATTGCATTTGTAAGTGGTTGTAGT 21173 |||||| || |||| |||||| ||||||||||||||||| ||||| || ||| Sbjct 55967 CTCATAACGTGCTCTATCCTGTTCATCTAGCCACTCATTGCATTTATAAGTAGTAGTAAA 56026 Query 21174 AGCGAATGTATCAGCTCGGCTAGTCT--CTTCATCAAAGAACACACGTTTGAGCCAGTGC 21231 ||||| || ||| | ||| || | ||||||||||||| | ||| ||||| || Sbjct 56027 GGCGAACGTGTCA--TAAGCTTGTGTAGCTTCATCAAAGAAATAAGATTTAAGCCAATGG 56084 Query 21232 CTCTCATTCCACGGGTTAAATGTGACTGTGATTTGTTTAAAGAAATCAGGTACATCTAGG 21291 | ||| |||| |||||||| || |||||||||||||||||||| ||||| |||| | Sbjct 56085 TTTTCACTCCAAGGGTTAAAAGTAACTGTGATTTGTTTAAAGAAGTCAGGAGCATCAAAA 56144 Query 21292 CTACCACGGATTGACTCAACTACTGTACTGAACTTGTCTTCAGTC-TCAATTTGATATGC 21350 |||||| || || ||||| ||||| ||||| | || ||| || |||| || || Sbjct 56145 GAACCACGAATAGATTCAACAACTGTTTCAAACTTATGTT-GGTCTTCTATTTCGTAAGC 56203 Query 21351 TTCCTCAAACCATGCCCAACAAAGACTGCCGACATCGACCGTGATAGATGTGATTTTGAG 21410 |||||||||||| ||||| || | | | || ||||| || || |||||||| ||||| | Sbjct 56204 TTCCTCAAACCAAGCCCAGCACAAATTACCCACATCAACAGTAATAGATGTTATTTTCAA 56263 Query 21411 TTCATCATCCAAACCACGGAATAGGATTTTTTGACCAGTCGCTTTTACAGTTATTTCAGG 21470 | |||||| || || || || | || || || ||||| | ||| ||||| || || Sbjct 56264 TGGATCATCTAATCCTCGAAACAATATCTTCTGTCCAGTAGGTTTATATGTTATCTCTGG 56323 Query 21471 CAAAGACTCGTTAAATTTAAACAAATGAGTCACACCCAACACATTACACGCCCATTTAAA 21530 || ||||| || || ||||| | | || ||||| ||| |||||||| || Sbjct 56324 CATTGACTCATTGAACTTAAATTGGTCTTTTACTCCCAATCTGTTAATGGCCCATTTTAA 56383 Query 21531 ATCCGTATAAGTTGATTGCTTGTTGGTATTCGAGTATCTACGAATAACAAGCAAGTTGGC 21590 ||| || ||| |||||||| ||||| ||||||||||||| || || | || || Sbjct 56384 ATCAGTGTAACAAGATTGCTTTAATGTATTGGAGTATCTACGAACCACTAGGAGATTAGC 56443 Query 21591 CCAGGGATACTTCAAAAGACGGATAACATAATTCAAAGCGGTTGTCTTGGACTTCTTCGA 21650 |||||| |||| || | || |||| | || || | ||||| || |||||||| || Sbjct 56444 CCAGGGGTACTGCATGATTCGTTTAACGAAGTTTAATACAGTTGTTTTAGACTTCTTAGA 56503 Query 21651 ACCACGGGAACCTTTTACAACACGATAAAGATTTCTTG-AGCGCCAGAACTGTCCGTATC 21709 |||||| |||||||| ||| | ||| | | |||||| | ||||||| | ||||| Sbjct 56504 ACCACGAGAACCTTTGCAAACTCTATAGA-AGTTCTTGCAATGCCAGAAACGATTGTATC 56562 Query 21710 CA 21711 || Sbjct 56563 CA 56564 Score = 361 bits (400), Expect = 1e-95 Identities = 593/842 (70%), Gaps = 16/842 (2%) Strand=Plus/Plus Query 20878 TCATCAAAGACATAAATCTCTTTCGTCGTGTCATTTATC-AACGAACAACACAAAGCGGT 20936 ||||| || |||||||| |||| | | | | | | | || |||||| ||| || || Sbjct 98452 TCATCGAATACATAAATAG-TTTCATTCTTTAAATCAACTAAAGAACAAGTCAATGCAGT 98510 Query 20937 TGGATCGTGAGTAAAACCAAAGTCAAGACCGATACATAACTTATTAGCTGAATCTCGTAG 20996 |||||||| ||| |||||||||| ||||| | | |||| || | | |||| | Sbjct 98511 TGGATCGTTCGTATAACCAAAGTCGAGACCAAAAGC--ACTTTGTACATCTTT-TCGTTG 98567 Query 20997 CAAT---TCATCCTTATCGAAATCCTTGACGGTCACGTTCTCATAGATTAAACCTTCAGC 21053 | ||||| |||| || || || | ||| ||||| | | ||| ||||| Sbjct 98568 TCTTATCTCATCAATATCAAAGTCTCGTACTTGGAAGTTTTCATATACAAGACCATCAGC 98627 Query 21054 AACTCCCCATTCACCATCACAAACGATTCTCGCACGCCTTGGATTTGTGTGATACAAGTC 21113 ||| |||||||| ||||||||||||||||| ||||| ||||| || | ||| || Sbjct 98628 AACGCCCCATTCGCCATCACAAACGATTCTTGCACGTCTTGGGTTCTTAGTATATAAACT 98687 Query 21114 CTCATAGCGCTTAATATCGACTTCATCAAGCCACTCATTGCATTTGTAAGTGGTTGTAGT 21173 |||||| || |||| |||||| ||||||||||||||||| ||||| || ||| Sbjct 98688 CTCATAACGTGCTCTATCCTGTTCATCTAGCCACTCATTGCATTTATAAGTAGTAGTAAA 98747 Query 21174 AGCGAATGTATCAGCTCGGCTAGTCT--CTTCATCAAAGAACACACGTTTGAGCCAGTGC 21231 ||||| || ||| | ||| || | ||||||||||||| | ||| ||||| || Sbjct 98748 GGCGAACGTGTCA--TAAGCTTGTGTAGCTTCATCAAAGAAATAAGATTTAAGCCAATGG 98805 Query 21232 CTCTCATTCCACGGGTTAAATGTGACTGTGATTTGTTTAAAGAAATCAGGTACATCTAGG 21291 | ||| |||| |||||||| || |||||||||||||||||||| ||||| |||| | Sbjct 98806 TTTTCACTCCAAGGGTTAAAAGTAACTGTGATTTGTTTAAAGAAGTCAGGAGCATCAAAA 98865 Query 21292 CTACCACGGATTGACTCAACTACTGTACTGAACTTGTCTTCAGTC-TCAATTTGATATGC 21350 |||||| || || ||||| ||||| ||||| | || ||| || |||| || || Sbjct 98866 GAACCACGAATAGATTCAACAACTGTTTCAAACTTATGTT-GGTCTTCTATTTCGTAAGC 98924 Query 21351 TTCCTCAAACCATGCCCAACAAAGACTGCCGACATCGACCGTGATAGATGTGATTTTGAG 21410 |||||||||||| ||||| || | | | || ||||| || || |||||||| ||||| | Sbjct 98925 TTCCTCAAACCAAGCCCAGCACAAATTACCCACATCAACAGTAATAGATGTTATTTTCAA 98984 Query 21411 TTCATCATCCAAACCACGGAATAGGATTTTTTGACCAGTCGCTTTTACAGTTATTTCAGG 21470 | |||||| || || || || | || || || ||||| | ||| ||||| || || Sbjct 98985 TGGATCATCTAATCCTCGAAACAATATCTTCTGTCCAGTAGGTTTATATGTTATCTCTGG 99044 Query 21471 CAAAGACTCGTTAAATTTAAACAAATGAGTCACACCCAACACATTACACGCCCATTTAAA 21530 || ||||| || || ||||| | | || ||||| ||| |||||||| || Sbjct 99045 CATTGACTCATTGAACTTAAATTGGTCTTTTACTCCCAATCTGTTAATGGCCCATTTTAA 99104 Query 21531 ATCCGTATAAGTTGATTGCTTGTTGGTATTCGAGTATCTACGAATAACAAGCAAGTTGGC 21590 ||| || ||| |||||||| ||||| ||||||||||||| || || | || || Sbjct 99105 ATCAGTGTAACAAGATTGCTTTAATGTATTGGAGTATCTACGAACCACTAGGAGATTAGC 99164 Query 21591 CCAGGGATACTTCAAAAGACGGATAACATAATTCAAAGCGGTTGTCTTGGACTTCTTCGA 21650 |||||| |||| || | || |||| | || || | ||||| || |||||||| || Sbjct 99165 CCAGGGGTACTGCATGATTCGTTTAACGAAGTTTAATACAGTTGTTTTAGACTTCTTAGA 99224 Query 21651 ACCACGGGAACCTTTTACAACACGATAAAGATTTCTTG-AGCGCCAGAACTGTCCGTATC 21709 |||||| |||||||| ||| | ||| | | |||||| | ||||||| | ||||| Sbjct 99225 ACCACGAGAACCTTTGCAAACTCTATAGA-AGTTCTTGCAATGCCAGAAACGATTGTATC 99283 Query 21710 CA 21711 || Sbjct 99284 CA 99285 Score = 361 bits (400), Expect = 1e-95 Identities = 593/842 (70%), Gaps = 16/842 (2%) Strand=Plus/Plus Query 20878 TCATCAAAGACATAAATCTCTTTCGTCGTGTCATTTATC-AACGAACAACACAAAGCGGT 20936 ||||| || |||||||| |||| | | | | | | | || |||||| ||| || || Sbjct 141384 TCATCGAATACATAAATAG-TTTCATTCTTTAAATCAACTAAAGAACAAGTCAATGCAGT 141442 Query 20937 TGGATCGTGAGTAAAACCAAAGTCAAGACCGATACATAACTTATTAGCTGAATCTCGTAG 20996 |||||||| ||| |||||||||| ||||| | | |||| || | | |||| | Sbjct 141443 TGGATCGTTCGTATAACCAAAGTCGAGACCAAAAGC--ACTTTGTACATCTTT-TCGTTG 141499 Query 20997 CAAT---TCATCCTTATCGAAATCCTTGACGGTCACGTTCTCATAGATTAAACCTTCAGC 21053 | ||||| |||| || || || | ||| ||||| | | ||| ||||| Sbjct 141500 TCTTATCTCATCAATATCAAAGTCTCGTACTTGGAAGTTTTCATATACAAGACCATCAGC 141559 Query 21054 AACTCCCCATTCACCATCACAAACGATTCTCGCACGCCTTGGATTTGTGTGATACAAGTC 21113 ||| |||||||| ||||||||||||||||| ||||| ||||| || | ||| || Sbjct 141560 AACGCCCCATTCGCCATCACAAACGATTCTTGCACGTCTTGGGTTCTTAGTATATAAACT 141619 Query 21114 CTCATAGCGCTTAATATCGACTTCATCAAGCCACTCATTGCATTTGTAAGTGGTTGTAGT 21173 |||||| || |||| |||||| ||||||||||||||||| ||||| || ||| Sbjct 141620 CTCATAACGTGCTCTATCCTGTTCATCTAGCCACTCATTGCATTTATAAGTAGTAGTAAA 141679 Query 21174 AGCGAATGTATCAGCTCGGCTAGTCT--CTTCATCAAAGAACACACGTTTGAGCCAGTGC 21231 ||||| || ||| | ||| || | ||||||||||||| | ||| ||||| || Sbjct 141680 GGCGAACGTGTCA--TAAGCTTGTGTAGCTTCATCAAAGAAATAAGATTTAAGCCAATGG 141737 Query 21232 CTCTCATTCCACGGGTTAAATGTGACTGTGATTTGTTTAAAGAAATCAGGTACATCTAGG 21291 | ||| |||| |||||||| || |||||||||||||||||||| ||||| |||| | Sbjct 141738 TTTTCACTCCAAGGGTTAAAAGTAACTGTGATTTGTTTAAAGAAGTCAGGAGCATCAAAA 141797 Query 21292 CTACCACGGATTGACTCAACTACTGTACTGAACTTGTCTTCAGTC-TCAATTTGATATGC 21350 |||||| || || ||||| ||||| ||||| | || ||| || |||| || || Sbjct 141798 GAACCACGAATAGATTCAACAACTGTTTCAAACTTATGTT-GGTCTTCTATTTCGTAAGC 141856 Query 21351 TTCCTCAAACCATGCCCAACAAAGACTGCCGACATCGACCGTGATAGATGTGATTTTGAG 21410 |||||||||||| ||||| || | | | || ||||| || || |||||||| ||||| | Sbjct 141857 TTCCTCAAACCAAGCCCAGCACAAATTACCCACATCAACAGTAATAGATGTTATTTTCAA 141916 Query 21411 TTCATCATCCAAACCACGGAATAGGATTTTTTGACCAGTCGCTTTTACAGTTATTTCAGG 21470 | |||||| || || || || | || || || ||||| | ||| ||||| || || Sbjct 141917 TGGATCATCTAATCCTCGAAACAATATCTTCTGTCCAGTAGGTTTATATGTTATCTCTGG 141976 Query 21471 CAAAGACTCGTTAAATTTAAACAAATGAGTCACACCCAACACATTACACGCCCATTTAAA 21530 || ||||| || || ||||| | | || ||||| ||| |||||||| || Sbjct 141977 CATTGACTCATTGAACTTAAATTGGTCTTTTACTCCCAATCTGTTAATGGCCCATTTTAA 142036 Query 21531 ATCCGTATAAGTTGATTGCTTGTTGGTATTCGAGTATCTACGAATAACAAGCAAGTTGGC 21590 ||| || ||| |||||||| ||||| ||||||||||||| || || | || || Sbjct 142037 ATCAGTGTAACAAGATTGCTTTAATGTATTGGAGTATCTACGAACCACTAGGAGATTAGC 142096 Query 21591 CCAGGGATACTTCAAAAGACGGATAACATAATTCAAAGCGGTTGTCTTGGACTTCTTCGA 21650 |||||| |||| || | || |||| | || || | ||||| || |||||||| || Sbjct 142097 CCAGGGGTACTGCATGATTCGTTTAACGAAGTTTAATACAGTTGTTTTAGACTTCTTAGA 142156 Query 21651 ACCACGGGAACCTTTTACAACACGATAAAGATTTCTTG-AGCGCCAGAACTGTCCGTATC 21709 |||||| |||||||| ||| | ||| | | |||||| | ||||||| | ||||| Sbjct 142157 ACCACGAGAACCTTTGCAAACTCTATAGA-AGTTCTTGCAATGCCAGAAACGATTGTATC 142215 Query 21710 CA 21711 || Sbjct 142216 CA 142217 Score = 361 bits (400), Expect = 1e-95 Identities = 593/842 (70%), Gaps = 16/842 (2%) Strand=Plus/Plus Query 20878 TCATCAAAGACATAAATCTCTTTCGTCGTGTCATTTATC-AACGAACAACACAAAGCGGT 20936 ||||| || |||||||| |||| | | | | | | | || |||||| ||| || || Sbjct 184262 TCATCGAATACATAAATAG-TTTCATTCTTTAAATCAACTAAAGAACAAGTCAATGCAGT 184320 Query 20937 TGGATCGTGAGTAAAACCAAAGTCAAGACCGATACATAACTTATTAGCTGAATCTCGTAG 20996 |||||||| ||| |||||||||| ||||| | | |||| || | | |||| | Sbjct 184321 TGGATCGTTCGTATAACCAAAGTCGAGACCAAAAGC--ACTTTGTACATCTTT-TCGTTG 184377 Query 20997 CAAT---TCATCCTTATCGAAATCCTTGACGGTCACGTTCTCATAGATTAAACCTTCAGC 21053 | ||||| |||| || || || | ||| ||||| | | ||| ||||| Sbjct 184378 TCTTATCTCATCAATATCAAAGTCTCGTACTTGGAAGTTTTCATATACAAGACCATCAGC 184437 Query 21054 AACTCCCCATTCACCATCACAAACGATTCTCGCACGCCTTGGATTTGTGTGATACAAGTC 21113 ||| |||||||| ||||||||||||||||| ||||| ||||| || | ||| || Sbjct 184438 AACGCCCCATTCGCCATCACAAACGATTCTTGCACGTCTTGGGTTCTTAGTATATAAACT 184497 Query 21114 CTCATAGCGCTTAATATCGACTTCATCAAGCCACTCATTGCATTTGTAAGTGGTTGTAGT 21173 |||||| || |||| |||||| ||||||||||||||||| ||||| || ||| Sbjct 184498 CTCATAACGTGCTCTATCCTGTTCATCTAGCCACTCATTGCATTTATAAGTAGTAGTAAA 184557 Query 21174 AGCGAATGTATCAGCTCGGCTAGTCT--CTTCATCAAAGAACACACGTTTGAGCCAGTGC 21231 ||||| || ||| | ||| || | ||||||||||||| | ||| ||||| || Sbjct 184558 GGCGAACGTGTCA--TAAGCTTGTGTAGCTTCATCAAAGAAATAAGATTTAAGCCAATGG 184615 Query 21232 CTCTCATTCCACGGGTTAAATGTGACTGTGATTTGTTTAAAGAAATCAGGTACATCTAGG 21291 | ||| |||| |||||||| || |||||||||||||||||||| ||||| |||| | Sbjct 184616 TTTTCACTCCAAGGGTTAAAAGTAACTGTGATTTGTTTAAAGAAGTCAGGAGCATCAAAA 184675 Query 21292 CTACCACGGATTGACTCAACTACTGTACTGAACTTGTCTTCAGTC-TCAATTTGATATGC 21350 |||||| || || ||||| ||||| ||||| | || ||| || |||| || || Sbjct 184676 GAACCACGAATAGATTCAACAACTGTTTCAAACTTATGTT-GGTCTTCTATTTCGTAAGC 184734 Query 21351 TTCCTCAAACCATGCCCAACAAAGACTGCCGACATCGACCGTGATAGATGTGATTTTGAG 21410 |||||||||||| ||||| || | | | || ||||| || || |||||||| ||||| | Sbjct 184735 TTCCTCAAACCAAGCCCAGCACAAATTACCCACATCAACAGTAATAGATGTTATTTTCAA 184794 Query 21411 TTCATCATCCAAACCACGGAATAGGATTTTTTGACCAGTCGCTTTTACAGTTATTTCAGG 21470 | |||||| || || || || | || || || ||||| | ||| ||||| || || Sbjct 184795 TGGATCATCTAATCCTCGAAACAATATCTTCTGTCCAGTAGGTTTATATGTTATCTCTGG 184854 Query 21471 CAAAGACTCGTTAAATTTAAACAAATGAGTCACACCCAACACATTACACGCCCATTTAAA 21530 || ||||| || || ||||| | | || ||||| ||| |||||||| || Sbjct 184855 CATTGACTCATTGAACTTAAATTGGTCTTTTACTCCCAATCTGTTAATGGCCCATTTTAA 184914 Query 21531 ATCCGTATAAGTTGATTGCTTGTTGGTATTCGAGTATCTACGAATAACAAGCAAGTTGGC 21590 ||| || ||| |||||||| ||||| ||||||||||||| || || | || || Sbjct 184915 ATCAGTGTAACAAGATTGCTTTAATGTATTGGAGTATCTACGAACCACTAGGAGATTAGC 184974 Query 21591 CCAGGGATACTTCAAAAGACGGATAACATAATTCAAAGCGGTTGTCTTGGACTTCTTCGA 21650 |||||| |||| || | || |||| | || || | ||||| || |||||||| || Sbjct 184975 CCAGGGGTACTGCATGATTCGTTTAACGAAGTTTAATACAGTTGTTTTAGACTTCTTAGA 185034 Query 21651 ACCACGGGAACCTTTTACAACACGATAAAGATTTCTTG-AGCGCCAGAACTGTCCGTATC 21709 |||||| |||||||| ||| | ||| | | |||||| | ||||||| | ||||| Sbjct 185035 ACCACGAGAACCTTTGCAAACTCTATAGA-AGTTCTTGCAATGCCAGAAACGATTGTATC 185093 Query 21710 CA 21711 || Sbjct 185094 CA 185095 Score = 361 bits (400), Expect = 1e-95 Identities = 593/842 (70%), Gaps = 16/842 (2%) Strand=Plus/Plus Query 20878 TCATCAAAGACATAAATCTCTTTCGTCGTGTCATTTATC-AACGAACAACACAAAGCGGT 20936 ||||| || |||||||| |||| | | | | | | | || |||||| ||| || || Sbjct 398612 TCATCGAATACATAAATAG-TTTCATTCTTTAAATCAACTAAAGAACAAGTCAATGCAGT 398670 Query 20937 TGGATCGTGAGTAAAACCAAAGTCAAGACCGATACATAACTTATTAGCTGAATCTCGTAG 20996 |||||||| ||| |||||||||| ||||| | | |||| || | | |||| | Sbjct 398671 TGGATCGTTCGTATAACCAAAGTCGAGACCAAAAGC--ACTTTGTACATCTTT-TCGTTG 398727 Query 20997 CAAT---TCATCCTTATCGAAATCCTTGACGGTCACGTTCTCATAGATTAAACCTTCAGC 21053 | ||||| |||| || || || | ||| ||||| | | ||| ||||| Sbjct 398728 TCTTATCTCATCAATATCAAAGTCTCGTACTTGGAAGTTTTCATATACAAGACCATCAGC 398787 Query 21054 AACTCCCCATTCACCATCACAAACGATTCTCGCACGCCTTGGATTTGTGTGATACAAGTC 21113 ||| |||||||| ||||||||||||||||| ||||| ||||| || | ||| || Sbjct 398788 AACGCCCCATTCGCCATCACAAACGATTCTTGCACGTCTTGGGTTCTTAGTATATAAACT 398847 Query 21114 CTCATAGCGCTTAATATCGACTTCATCAAGCCACTCATTGCATTTGTAAGTGGTTGTAGT 21173 |||||| || |||| |||||| ||||||||||||||||| ||||| || ||| Sbjct 398848 CTCATAACGTGCTCTATCCTGTTCATCTAGCCACTCATTGCATTTATAAGTAGTAGTAAA 398907 Query 21174 AGCGAATGTATCAGCTCGGCTAGTCT--CTTCATCAAAGAACACACGTTTGAGCCAGTGC 21231 ||||| || ||| | ||| || | ||||||||||||| | ||| ||||| || Sbjct 398908 GGCGAACGTGTCA--TAAGCTTGTGTAGCTTCATCAAAGAAATAAGATTTAAGCCAATGG 398965 Query 21232 CTCTCATTCCACGGGTTAAATGTGACTGTGATTTGTTTAAAGAAATCAGGTACATCTAGG 21291 | ||| |||| |||||||| || |||||||||||||||||||| ||||| |||| | Sbjct 398966 TTTTCACTCCAAGGGTTAAAAGTAACTGTGATTTGTTTAAAGAAGTCAGGAGCATCAAAA 399025 Query 21292 CTACCACGGATTGACTCAACTACTGTACTGAACTTGTCTTCAGTC-TCAATTTGATATGC 21350 |||||| || || ||||| ||||| ||||| | || ||| || |||| || || Sbjct 399026 GAACCACGAATAGATTCAACAACTGTTTCAAACTTATGTT-GGTCTTCTATTTCGTAAGC 399084 Query 21351 TTCCTCAAACCATGCCCAACAAAGACTGCCGACATCGACCGTGATAGATGTGATTTTGAG 21410 |||||||||||| ||||| || | | | || ||||| || || |||||||| ||||| | Sbjct 399085 TTCCTCAAACCAAGCCCAGCACAAATTACCCACATCAACAGTAATAGATGTTATTTTCAA 399144 Query 21411 TTCATCATCCAAACCACGGAATAGGATTTTTTGACCAGTCGCTTTTACAGTTATTTCAGG 21470 | |||||| || || || || | || || || ||||| | ||| ||||| || || Sbjct 399145 TGGATCATCTAATCCTCGAAACAATATCTTCTGTCCAGTAGGTTTATATGTTATCTCTGG 399204 Query 21471 CAAAGACTCGTTAAATTTAAACAAATGAGTCACACCCAACACATTACACGCCCATTTAAA 21530 || ||||| || || ||||| | | || ||||| ||| |||||||| || Sbjct 399205 CATTGACTCATTGAACTTAAATTGGTCTTTTACTCCCAATCTGTTAATGGCCCATTTTAA 399264 Query 21531 ATCCGTATAAGTTGATTGCTTGTTGGTATTCGAGTATCTACGAATAACAAGCAAGTTGGC 21590 ||| || ||| |||||||| ||||| ||||||||||||| || || | || || Sbjct 399265 ATCAGTGTAACAAGATTGCTTTAATGTATTGGAGTATCTACGAACCACTAGGAGATTAGC 399324 Query 21591 CCAGGGATACTTCAAAAGACGGATAACATAATTCAAAGCGGTTGTCTTGGACTTCTTCGA 21650 |||||| |||| || | || |||| | || || | ||||| || |||||||| || Sbjct 399325 CCAGGGGTACTGCATGATTCGTTTAACGAAGTTTAATACAGTTGTTTTAGACTTCTTAGA 399384 Query 21651 ACCACGGGAACCTTTTACAACACGATAAAGATTTCTTG-AGCGCCAGAACTGTCCGTATC 21709 |||||| |||||||| ||| | ||| | | |||||| | ||||||| | ||||| Sbjct 399385 ACCACGAGAACCTTTGCAAACTCTATAGA-AGTTCTTGCAATGCCAGAAACGATTGTATC 399443 Query 21710 CA 21711 || Sbjct 399444 CA 399445 Score = 219 bits (242), Expect = 1e-52 Identities = 330/464 (71%), Gaps = 4/464 (1%) Strand=Plus/Plus Query 21250 AATGTGACTGTGATTTGTTTAAAGAAATCAGGTACATCTAGGCTACCACGGATTGACTCA 21309 || || |||||||||||||||||||| ||||| |||| | |||||| || || ||| Sbjct 356115 AAAGTAACTGTGATTTGTTTAAAGAAGTCAGGAGCATCAAAAGAACCACGAATAGATTCA 356174 Query 21310 ACTACTGTACTGAACTTGTCTTCAGTC-TCAATTTGATATGCTTCCTCAAACCATGCCCA 21368 || ||||| ||||| | || ||| || |||| || |||||||||||||| ||||| Sbjct 356175 ACAACTGTTTCAAACTTATGTT-GGTCTTCTATTTCGTAAGCTTCCTCAAACCAAGCCCA 356233 Query 21369 ACAAAGACTGCCGACATCGACCGTGATAGATGTGATTTTGAGTTCATCATCCAAACCACG 21428 || | | | || ||||| || || |||||||| ||||| | | |||||| || || || Sbjct 356234 GCACAAATTACCCACATCAACAGTAATAGATGTTATTTTCAATGGATCATCTAATCCTCG 356293 Query 21429 GAATAGGATTTTTTGACCAGTCGCTTTTACAGTTATTTCAGGCAAAGACTCGTTAAATTT 21488 || | || || || ||||| | ||| ||||| || |||| ||||| || || || Sbjct 356294 AAACAATATCTTCTGTCCAGTAGGTTTATATGTTATCTCTGGCATTGACTCATTGAACTT 356353 Query 21489 AAACAAATGAGTCACACCCAACACATTACACGCCCATTTAAAATCCGTATAAGTTGATTG 21548 ||| | | || ||||| ||| |||||||| ||||| || ||| ||||| Sbjct 356354 AAATTGGTCTTTTACTCCCAATCTGTTAATGGCCCATTTTAAATCAGTGTAACAAGATTG 356413 Query 21549 CTTGTTGGTATTCGAGTATCTACGAATAACAAGCAAGTTGGCCCAGGGATACTTCAAAAG 21608 ||| ||||| ||||||||||||| || || | || |||||||| |||| || | Sbjct 356414 CTTTAATGTATTGGAGTATCTACGAACCACTAGGAGATTAGCCCAGGGGTACTGCATGAT 356473 Query 21609 ACGGATAACATAATTCAAAGCGGTTGTCTTGGACTTCTTCGAACCACGGGAACCTTTTAC 21668 || |||| | || || | ||||| || |||||||| |||||||| |||||||| Sbjct 356474 TCGTTTAACGAAGTTTAATACAGTTGTTTTAGACTTCTTAGAACCACGAGAACCTTTGCA 356533 Query 21669 AACACGATAAAGATTTCTTG-AGCGCCAGAACTGTCCGTATCCA 21711 ||| | ||| | | |||||| | ||||||| | ||||||| Sbjct 356534 AACTCTATAGA-AGTTCTTGCAATGCCAGAAACGATTGTATCCA 356576 Score = 178 bits (196), Expect = 3e-40 Identities = 285/402 (71%), Gaps = 12/402 (3%) Strand=Plus/Plus Query 20878 TCATCAAAGACATAAATCTCTTTCGTCGTGTCATTTATC-AACGAACAACACAAAGCGGT 20936 ||||| || |||||||| |||| | | | | | | | || |||||| ||| || || Sbjct 355670 TCATCGAATACATAAATAG-TTTCATTCTTTAAATCAACTAAAGAACAAGTCAATGCAGT 355728 Query 20937 TGGATCGTGAGTAAAACCAAAGTCAAGACCGATACATAACTTATTAGCTGAATCTCGTAG 20996 |||||||| ||| |||||||||| ||||| | | |||| || | | |||| | Sbjct 355729 TGGATCGTTCGTATAACCAAAGTCGAGACCAAAAGC--ACTTTGTACATCTTT-TCGTTG 355785 Query 20997 CAAT---TCATCCTTATCGAAATCCTTGACGGTCACGTTCTCATAGATTAAACCTTCAGC 21053 | ||||| |||| || || || | ||| ||||| | | ||| ||||| Sbjct 355786 TCTTATCTCATCAATATCAAAGTCTCGTACTTGGAAGTTTTCATATACAAGACCATCAGC 355845 Query 21054 AACTCCCCATTCACCATCACAAACGATTCTCGCACGCCTTGGATTTGTGTGATACAAGTC 21113 ||| |||||||| ||||||||||||||||| ||||| ||||| || | ||| || Sbjct 355846 AACGCCCCATTCGCCATCACAAACGATTCTTGCACGTCTTGGGTTCTTAGTATATAAACT 355905 Query 21114 CTCATAGCGCTTAATATCGACTTCATCAAGCCACTCATTGCATTTGTAAGTGGTTGTAGT 21173 |||||| || |||| |||||| ||||||||||||||||| ||||| || ||| Sbjct 355906 CTCATAACGTGCTCTATCCTGTTCATCTAGCCACTCATTGCATTTATAAGTAGTAGTAAA 355965 Query 21174 AGCGAATGTATCAGCTCGGCTAGTCT--CTTCATCAAAGAACACACGTTTGAGCCAGTGC 21231 ||||| || ||| | ||| || | ||||||||||||| | ||| ||||| || Sbjct 355966 GGCGAACGTGTCA--TAAGCTTGTGTAGCTTCATCAAAGAAATAAGATTTAAGCCAATGG 356023 Query 21232 CTCTCATTCCACGGGTTAAATGTGACTGTGATTTGTTTAAAG 21273 | ||| |||| |||||||| || |||||||||||||||||| Sbjct 356024 TTTTCACTCCAAGGGTTAAAAGTAACTGTGATTTGTTTAAAG 356065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122730794546048