Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq109 77.0 5e-12 >seq109 Length=45177 Score = 77.0 bits (84), Expect = 5e-12 Identities = 68/84 (81%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198 |||||| |||| | |||||||||||| | | |||||||| |||||||| | ||||| Sbjct 44439 TGGCACTCCTTATTCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAAGGATTGTTCA 44380 Query 199 CCCGAACGCCTTAGTATTCTCTAC 222 | | |||||||| ||||||||||| Sbjct 44379 CTCAAACGCCTTCGTATTCTCTAC 44356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694382879785