Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq109 78.8 2e-12 >seq109 Length=45177 Score = 78.8 bits (86), Expect = 2e-12 Identities = 105/146 (72%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||| | || ||||||||| ||||||| Sbjct 44765 ATCTGCACTGTTATTCCAATTTCACTGAGCCAATCCTTGAGACAGCTGTTGTATCGTTAA 44706 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | ||| Sbjct 44705 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGTATTTCGCTACCTTAGGACCCTCATA 44646 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 | || ||||||| || | |||| || Sbjct 44645 GGTAAGGCCGCCATTCATCGGGGTTT 44620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062372961920