Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2 246 5e-63 >seq2 Length=44367670 Score = 246 bits (272), Expect = 5e-63 Identities = 156/169 (92%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 13485563 CGGACATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCC 13485622 Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147 ||||| |||||||||||||||||| ||| ||| |||||||| ||||||||||||| Sbjct 13485623 CTATTGGTGGGTGAACAATCCAACACTTGGTGAAGTCTGCTTCACAGTGATAGGAAGAGC 13485682 Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196 |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 13485683 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAATGCTTGGCTGCCA 13485731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854378255520