Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 8e-17 >seq2 Length=44367670 Score = 93.3 bits (102), Expect = 8e-17 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 219 GGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAA 278 |||| ||||| | |||||||| | |||| | ||| |||||||||||||||||| |||| Sbjct 42424897 GGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAG 42424956 Query 279 TGATCCGGCGGTGCTGAATGGAACGG 304 ||||||| |||||| |||||||| || Sbjct 42424957 TGATCCGACGGTGCCGAATGGAATGG 42424982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982374997920