Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq3 77.0 8e-12 >seq3 Length=44396707 Score = 77.0 bits (84), Expect = 8e-12 Identities = 88/116 (76%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 210 CAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTG 269 || ||||||| || |||| || ||| | ||| |||| || | | || | ||||| Sbjct 27491602 CATCTTCGGCAGACCGCTTA-GCTCCGTT-CATCTTCGGTGCAAGAGCGCTCAATCAGTG 27491659 Query 270 AGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCT 325 | |||||| |||||||||||||| |||||||||| | || |||||| ||| ||||| Sbjct 27491660 AACTATTATGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCATGGCTGTCT 27491715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177570030080