Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_
202014-05-27] 32,886 sequences; 488,954,160 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq736 398 1e-108
seq22 398 1e-108
seq20 398 1e-108
seq3 398 1e-108
seq2 398 1e-108
seq10 378 1e-102
seq77 376 4e-102
seq2498 349 5e-94
seq57 327 2e-87
seq395 320 3e-85
seq5 316 3e-84
seq4 165 1e-38
>seq736
Length=7293
Score = 398 bits (440), Expect = 1e-108
Identities = 245/256 (96%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 2447 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 2390
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2389 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 2330
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 2329 CCCGGGCCTGTCGGCCAAGGTGTGA-ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 2271
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 2270 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACG 2211
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 2210 GCCATAGTCCCTCTAA 2195
Score = 273 bits (302), Expect = 3e-71
Identities = 201/229 (88%), Gaps = 5/229 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 3112 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 3055
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 3054 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACACAGTTTAACAAGATT 2995
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| ||| |||||||||| | |||||| || | |||||||||||||||||||
Sbjct 2994 ACCCGGGCCTCTCGGCCAAGG--AAGGACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCG 2937
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2936 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 2888
>seq22
Length=192287
Score = 398 bits (440), Expect = 1e-108
Identities = 245/256 (96%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 152046 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 151989
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 151988 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 151929
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 151928 CCCGGGCCTGTCGGCCAAGGTGTGA-ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 151870
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 151869 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACG 151810
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 151809 GCCATAGTCCCTCTAA 151794
Score = 385 bits (426), Expect = 7e-105
Identities = 242/256 (95%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |
Sbjct 17553 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTTTGAATT-C 17496
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17495 CTCGTTAAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 17436
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 17435 CCCGGGCCTGTCGGCCAAGGTGTGA-ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 17377
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 17376 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACG 17317
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 17316 GCCATAGTCCCTCTAA 17301
Score = 376 bits (416), Expect = 4e-102
Identities = 240/256 (94%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||| |
Sbjct 80893 GTACAAAGGGCAGGGACGCAGTCAATGCGAGCT-GATGACTCGCGCTTACTAGGAATTAC 80835
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 80834 -TCGTTGAAGACCAACAATTGTAATGATCTATCCCCATCGCGATGAAATTTCAAAGATTA 80776
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 80775 CCCGGGCCTGTCGGCCAAGGTGTGA-ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 80717
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 80716 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACG 80657
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 80656 GCCATAGTCCCTCTAA 80641
Score = 170 bits (188), Expect = 3e-40
Identities = 104/109 (95%), Gaps = 1/109 (1%)
Strand=Plus/Minus
Query 148 CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 118913 CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 118854
Query 208 CTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT-CTCCCTCGAA 255
||||||||||||||||||||| ||||||||| |||||| |||||| ||
Sbjct 118853 CTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAA 118805
Score = 111 bits (122), Expect = 2e-22
Identities = 76/83 (92%), Gaps = 2/83 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||| |||||||||||||||| | || |||||||||||||||| ||||||||| |
Sbjct 152216 GTACAAAGGCCAGGGACGTAGTCAACACAAG-TTGATGACTCGCGCTTTCTAGGAATT-C 152159
Query 61 CTCGTTGAAGACCAACAATTGCA 83
|||||||||||| ||||||||||
Sbjct 152158 CTCGTTGAAGACAAACAATTGCA 152136
>seq20
Length=193719
Score = 398 bits (440), Expect = 1e-108
Identities = 245/256 (96%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 66776 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 66719
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 66718 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 66659
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 66658 CCCGGGCCTGTCGGCCAAGGTGTGA-ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 66600
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 66599 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACG 66540
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 66539 GCCATAGTCCCTCTAA 66524
Score = 398 bits (440), Expect = 1e-108
Identities = 245/256 (96%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 99112 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 99055
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 99054 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 98995
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 98994 CCCGGGCCTGTCGGCCAAGGTGTGA-ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 98936
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 98935 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACG 98876
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 98875 GCCATAGTCCCTCTAA 98860
Score = 398 bits (440), Expect = 1e-108
Identities = 245/256 (96%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 103609 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 103552
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 103551 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 103492
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 103491 CCCGGGCCTGTCGGCCAAGGTGTGA-ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 103433
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 103432 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACG 103373
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 103372 GCCATAGTCCCTCTAA 103357
Score = 176 bits (194), Expect = 7e-42
Identities = 177/224 (79%), Gaps = 12/224 (5%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||| |||||| |
Sbjct 125144 GTACAAAGGGCAGGGACGTAATCAACGCAAGCTA-ATGACTCACGCTTACTGGGAATT-C 125087
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT---TTCAAA-G 116
|||||| | | ||| |||| ||||| | ||||||||||||| ||| ||||| |
Sbjct 125086 CTCGTTCATGGGCAATAATTACAATGCCCAATCCCCATCACGA---AATGGGTTCAAGCG 125030
Query 117 ATTACCCGGACCTGTCGGCCAAGGTGATAGACT---CGTTGAATACATCAGTGTAGCGCG 173
|||||| ||| |||| ||| | || | || ||| || |||||||||| ||
Sbjct 125029 GTTACCCACTCCTTTCGGAGCAGGAAACAGTATGCACGATGACCACTTCAGTGTAGCACG 124970
Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
|||||||||| | |||||||||||||||||||||||||||||||
Sbjct 124969 CGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 124926
>seq3
Length=64984695
Score = 398 bits (440), Expect = 1e-108
Identities = 245/256 (96%), Gaps = 4/256 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 24562030 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 24562087
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24562088 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 24562147
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 24562148 CCCGGGCCTGTCGGCCAAGGTGTGA-ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 24562206
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 24562207 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACG 24562266
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 24562267 GCCATAGTCCCTCTAA 24562282
>seq2
Length=52886895
Score = 398 bits (440), Expect = 1e-108
Identities = 245/256 (96%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 45051554 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 45051497
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 45051496 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 45051437
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 45051436 CCCGGGCCTGTCGGCCAAGGTGTGA-ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 45051378
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 45051377 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACG 45051318
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 45051317 GCCATAGTCCCTCTAA 45051302
Score = 398 bits (440), Expect = 1e-108
Identities = 245/256 (96%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 45059607 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 45059550
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 45059549 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 45059490
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 45059489 CCCGGGCCTGTCGGCCAAGGTGTGA-ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 45059431
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 45059430 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACG 45059371
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 45059370 GCCATAGTCCCTCTAA 45059355
>seq10
Length=550871
Score = 378 bits (418), Expect = 1e-102
Identities = 232/243 (95%), Gaps = 3/243 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 77117 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 77060
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 77059 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 77000
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||| | |||||| ||||||||| | |||||||||||||||||||||||||| |||||||
Sbjct 76999 CCCAGGCCTGTCAGCCAAGGTGTGA-ACTCGTTGAATACATCAGTGTAGCGCACGTGCGG 76941
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 76940 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACG 76881
Query 241 GCC 243
|||
Sbjct 76880 GCC 76878
Score = 349 bits (386), Expect = 5e-94
Identities = 234/256 (91%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||| |||||| ||||||| |||||||| ||||||||||||||| |
Sbjct 89146 GTACAAAGGGCAGGGACGGAGTCAATGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 89089
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 89088 CTCGTTGAAGACCAACAATTGCAGTGATCTATCCCTGTCACGATGAAATTTCAAAGATTA 89029
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||| | |||||||||||||||| | |||||||||||||||||||||||||||| |||||
Sbjct 89028 CCCTGGCCTGTCGGCCAAGGTGTGA-ACTCGTTGAATACATCAGTGTAGCGCGCATGCGG 88970
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||| |||| ||||||||||||| |||||||||||||||||||||||| ||||||||| |
Sbjct 88969 CCCATAACACCTAAGGGCATCACCGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACG 88910
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 88909 GCCATAGTCCCTCTAA 88894
Score = 190 bits (210), Expect = 3e-46
Identities = 123/132 (93%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| |
Sbjct 7856 GTACAAAGGGCATGGACGTAGGAAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 7799
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 7798 CTCGTTGAAGACCAAAAATTGCAATGATCTATCCCCATCATGATGAAATTTCAAAGAGTA 7739
Query 121 CCCGGACCTGTC 132
||||| ||||||
Sbjct 7738 CCCGGGCCTGTC 7727
>seq77
Length=66831
Score = 376 bits (416), Expect = 4e-102
Identities = 232/244 (95%), Gaps = 3/244 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 7652 GTACAAAGGGCTGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 7595
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 7594 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAATGATTA 7535
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| ||||| |||||||||| | ||||||||||||||| ||||||||||||||||||
Sbjct 7534 CCCGGGCCTGTTGGCCAAGGTGGGA-ACTCGTTGAATACATTAGTGTAGCGCGCGTGCGG 7476
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 7475 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACG 7416
Query 241 GCCA 244
||||
Sbjct 7415 GCCA 7412
>seq2498
Length=1214
Score = 349 bits (386), Expect = 5e-94
Identities = 219/232 (94%), Gaps = 3/232 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 229 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 172
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 171 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 112
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||||| | |||||||||||||||||||||||| ||| |||||
Sbjct 111 CCCGGGCCTGTCGGCCAAGGTG-TGAACTCGTTGAATACATCAGTGTAGCACGCATGCGG 53
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232
|| ||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 52 TTCAAAACATCTAAGGGCATCACAAACCTGTTATTGCCTCAAACTTCCTTGG 1
>seq57
Length=90757
Score = 327 bits (362), Expect = 2e-87
Identities = 202/212 (95%), Gaps = 3/212 (1%)
Strand=Plus/Minus
Query 45 GCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGAT 104
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 90448 GCTTACTAGGAATT-CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGAT 90390
Query 105 GAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAG 164
||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||
Sbjct 90389 GAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGTGTGA-ACTCGTTGAATACATCAG 90331
Query 165 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAAC 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 90330 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAAC 90271
Query 225 TTCCGTGGCCTAAAAGGCCAT-CTCCCTCGAA 255
|||| ||||||||| |||||| |||||| ||
Sbjct 90270 TTCCTTGGCCTAAACGGCCATAGTCCCTCTAA 90239
>seq395
Length=18076
Score = 320 bits (354), Expect = 3e-85
Identities = 195/203 (96%), Gaps = 3/203 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 7715 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 7658
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 7657 CTCGTTGAAGACCAACAATTGCAATGATTTATCCCCATCACGATGAAATTTCAAAGATTA 7598
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||||
Sbjct 7597 CCCGGGCCTGTCGGCCAAGGTG-TGAACTCATTGAATACATCAGTGTAGCGCGCGTGCGG 7539
Query 181 CCCAGAACATCTAAGGGCATCAC 203
|||||||||||||||||||||||
Sbjct 7538 CCCAGAACATCTAAGGGCATCAC 7516
>seq5
Length=46902585
Score = 316 bits (350), Expect = 3e-84
Identities = 227/256 (89%), Gaps = 4/256 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||| |||||| |||||||||| |||| ||||||| ||||||||| |||||| |
Sbjct 32698514 GTACAAAGGGAAGGGACATAGTCAACGCAAGCT-GATGACTAGCGCTTACTTGGAATT-C 32698571
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 32698572 CTCGTTGAAGACAAACAATTGCAATGATCTATCTCCATCAAGATGAAATTTCAAAGATTA 32698631
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
| ||| ||||||||| ||||| || |||| |||||||||||||||||||| || ||||
Sbjct 32698632 CTCGGGCCTGTCGGCAAAGGT-ATGAACTCATTGAATACATCAGTGTAGCGAGCAAGCGG 32698690
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||| |
Sbjct 32698691 CCCAGAACATCTAAGGGCATCACAGACATGTTATTGCCTCAAACTTTCTTGGCCTAAACG 32698750
Query 241 GCCAT-CTCCCTCGAA 255
| || |||||| ||
Sbjct 32698751 ACAATAGTCCCTCTAA 32698766
Score = 255 bits (282), Expect = 9e-66
Identities = 214/256 (84%), Gaps = 6/256 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| | || |||| | ||||||||| || |||||||| | | ||||||| ||||
Sbjct 39084449 GTACAAAAGACATGGACTT--TCAACGCGATCT-GATGACTCACACGTACTAGGT-TTTC 39084504
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||
Sbjct 39084505 CTCGTTGAAGACCAACAATTGCAATGATTTATCACCATCACGATGAAATTTCAAAGAGTA 39084564
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
| | | ||||||| |||||| | ||| |||||||||||||||||||| |||||||
Sbjct 39084565 CTCATGCTTGTCGGCTAAGGTGTGA-ACTTGTTGAATACATCAGTGTAGCAGACGTGCGG 39084623
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|| |||||||||||| ||| |||| || |||||||||||||||||||| |||| ||||
Sbjct 39084624 CCTAGAACATCTAAGAGCACCACAAACATGTTATTGCCTCAAACTTCCTTGGCTTAAACA 39084683
Query 241 GCCATC-TCCCTCGAA 255
|||| |||||| ||
Sbjct 39084684 TACATCTTCCCTCTAA 39084699
Score = 75.2 bits (82), Expect = 2e-11
Identities = 67/82 (82%), Gaps = 3/82 (4%)
Strand=Plus/Minus
Query 90 TATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACT 149
||| || || || |||||||||||||||| | ||| ||||||| |||||||| | |||
Sbjct 14892640 TATTCCTATTACAATGAAATTTCAAAGATAA--CGGGCCTGTCGACCAAGGTG-TGAACT 14892584
Query 150 CGTTGAATACATCAGTGTAGCG 171
||||||||||||| || ||||
Sbjct 14892583 CGTTGAATACATCCTTGCAGCG 14892562
>seq4
Length=53719093
Score = 165 bits (182), Expect = 1e-38
Identities = 94/96 (98%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 148 CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 47856732 CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 47856791
Query 208 CTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCC 243
||||||||||||||||||||| ||||||||| ||||
Sbjct 47856792 CTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCC 47856827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751760425490
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |