Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq736 470 3e-130 seq57 239 8e-61 seq20 233 4e-59 seq22 230 4e-58 seq10 212 1e-52 seq5 197 3e-48 seq3 187 5e-45 seq77 132 9e-29 seq32691 125 1e-26 seq2 122 2e-25 seq824 111 3e-22 seq3375 98.7 2e-18 >seq736 Length=7293 Score = 470 bits (520), Expect = 3e-130 Identities = 295/317 (93%), Gaps = 1/317 (0%) Strand=Plus/Plus Query 2 ACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGG 61 ||| | |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| Sbjct 1485 ACTGGCTCCGGCCGGGCCTTTCCTCCTGGGGAACCGCATGCCCTTCACTGGGCGTGCCGG 1544 Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 121 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1545 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATA 1604 Query 122 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 181 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1605 CATTAGCATGGAATAATAGAATAGGACGCGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 1664 Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||||||| ||||||||| || ||||||| | ||||||||||||||||| Sbjct 1665 CGTAATGATTAATAGGGACAGTCGGGGGCATCCGTATTCAGTAGTCAGAGGTGAAATTCT 1724 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 ||||| || ||||||| ||||||||||||||| || ||||||||||||||||||||||| Sbjct 1725 TGGATCTACTGAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG 1784 Query 302 TGAACGAAAGTTAGGGG 318 ||||||||||| |||| Sbjct 1785 -GAACGAAAGTTGGGGG 1800 >seq57 Length=90757 Score = 239 bits (264), Expect = 8e-61 Identities = 243/310 (78%), Gaps = 9/310 (3%) Strand=Plus/Plus Query 16 GGCCTTTC-CTTCTG---GGGATCCGCA--TGCCCTTCACTGGGTGTGCCGGGGAGCCAG 69 ||||| || |||||| | ||| |||| || |||| ||||| | | || | || | Sbjct 89537 GGCCTGTCTCTTCTGTCGGCGATACGCACCTGGCCTTAACTGGCCGGGTCGTGCCTCCGG 89596 Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGC 128 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||| Sbjct 89597 CGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGC 89656 Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 |||| |||| | |||||| | || | ||||| |||||| | ||| || |||||| Sbjct 89657 ATGGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATG 89715 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||| Sbjct 89716 ATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTT 89775 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 || ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||| Sbjct 89776 ATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGA 89834 Query 309 AAGTTAGGGG 318 ||||| |||| Sbjct 89835 AAGTTGGGGG 89844 >seq20 Length=193719 Score = 233 bits (258), Expect = 4e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 65884 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 65943 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | || | ||||| |||||| | ||| || |||||||| Sbjct 65944 GGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 66002 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 66003 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 66062 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 66063 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 66121 Query 311 GTTAGGGG 318 ||| |||| Sbjct 66122 GTTGGGGG 66129 Score = 233 bits (258), Expect = 4e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 98220 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 98279 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | || | ||||| |||||| | ||| || |||||||| Sbjct 98280 GGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 98338 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 98339 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 98398 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 98399 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 98457 Query 311 GTTAGGGG 318 ||| |||| Sbjct 98458 GTTGGGGG 98465 Score = 187 bits (206), Expect = 5e-45 Identities = 163/200 (82%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178 |||||||||||||| |||| | |||||| | || | ||||| |||||| | ||| Sbjct 102765 ATACATTAGCATGGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGAT 102823 Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 || ||||||||||| ||||| ||||||||| | ||||| || |||||||||||||| Sbjct 102824 CGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAAT 102883 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 |||||||||||| ||||| ||| ||||||||||| || |||||||||||||||||||| Sbjct 102884 TCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAAT 102943 Query 299 CAGTGAACGAAAGTTAGGGG 318 || ||||||||||| |||| Sbjct 102944 CA-AGAACGAAAGTTGGGGG 102962 Score = 149 bits (164), Expect = 1e-33 Identities = 151/193 (78%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA-CCGCCGTA 185 |||||||||||| ||||||||| | ||||||||||||||||| | || | || ||| Sbjct 124188 GCATGGAATAATGGAATAGGACCTT-GGTTCTATTTTGTTGGTCTTAAGAATCCAAGGTA 124246 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||| ||||| || |||||| | ||||| | |||||||||||||||||| Sbjct 124247 ATGATTAAGAGGGACAGACGGGGGCATTTGTATTGCGGCGCTAGAGGTGAAATTCTTGGA 124306 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 ||||| |||||| |||||||| || ||||| |||||||||||||||| ||| Sbjct 124307 CCGTCGCAAGACAAACTACAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAA 124365 Query 306 CGAAAGTTAGGGG 318 |||||||||| || Sbjct 124366 CGAAAGTTAGAGG 124378 >seq22 Length=192287 Score = 230 bits (254), Expect = 4e-58 Identities = 202/248 (81%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || ||| |||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 80002 CTGTTATTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 80061 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | || | ||||| |||||| | ||| || |||||||| Sbjct 80062 GGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 80120 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 80121 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 80180 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 80181 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 80239 Query 311 GTTAGGGG 318 ||| |||| Sbjct 80240 GTTGGGGG 80247 Score = 230 bits (254), Expect = 4e-58 Identities = 202/248 (81%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCAT 130 || |||||| ||| ||||||||||| |||||||| |||| ||| | |||||||||||| Sbjct 151154 CTGTTACTTCGAAGAAATTAGAGTGCTCAAAGCAAGCCTACCCTCTATATACATTAGCAT 151213 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | | ||||||| |||||| | |||| || |||||||| Sbjct 151214 GGGATAACATCATAGGATTTT-GATTCTATTGTGTTGGCCTTCAGGATCGGAGTAATGAT 151272 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 151273 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 151332 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 151333 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 151391 Query 311 GTTAGGGG 318 ||| |||| Sbjct 151392 GTTGGGGG 151399 Score = 212 bits (234), Expect = 1e-52 Identities = 198/248 (80%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| | | |||||||||||| Sbjct 118166 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACACCCTTTATACATTAGCAT 118225 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | | | ||||| || ||| | |||| || |||||||| Sbjct 118226 GGGATAACATCATAGGATTT-CTATCCTATTGTGCTGGCCTTCAGGATCGGAGTAATGAT 118284 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| || |||||||||||| | |||| || |||||||||||||||||||||||||| Sbjct 118285 TAACAGAGATAGTCGGGGGCATTCATATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 118344 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 118345 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 118403 Query 311 GTTAGGGG 318 ||| |||| Sbjct 118404 GTTGGGGG 118411 Score = 187 bits (206), Expect = 5e-45 Identities = 163/200 (82%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178 |||||||||||||| |||| | |||||| | || | ||||| |||||| | ||| Sbjct 16709 ATACATTAGCATGGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGAT 16767 Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 || ||||||||||| ||||| ||||||||| | ||||| || |||||||||||||| Sbjct 16768 CGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAAT 16827 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 |||||||||||| ||||| ||| ||||||||||| || |||||||||||||||||||| Sbjct 16828 TCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAAT 16887 Query 299 CAGTGAACGAAAGTTAGGGG 318 || ||||||||||| |||| Sbjct 16888 CA-AGAACGAAAGTTGGGGG 16906 Score = 86.0 bits (94), Expect = 1e-14 Identities = 85/109 (78%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 || |||| ||||| | | || | || | |||||||||||||| ||||||||||| || Sbjct 37725 TGGCCTTAACTGGCAGGGTCGTGCCTCCGGCACTTTTACTTTGAAGAAATTAGAGTGCTC 37784 Query 100 AAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGA 147 |||||| |||| |||| | |||||||||||| | |||| | |||||| Sbjct 37785 AAAGCAAGCCTACGCTCTGTATACATTAGCATTGGATAACATCATAGGA 37833 >seq10 Length=550871 Score = 212 bits (234), Expect = 1e-52 Identities = 224/290 (77%), Gaps = 5/290 (2%) Strand=Plus/Plus Query 32 GATCCGCA--TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAAT 89 ||| |||| || |||| ||||| | | || | || | || |||||||||| |||| Sbjct 88203 GATACGCACCTGGCCTTAACTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAAT 88262 Query 90 TAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGAC 148 ||||||| |||||||| |||| |||| | |||||||||||||| |||| | |||||| Sbjct 88263 TAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATCATAGGAT 88322 Query 149 GTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGG 208 | || | ||||| |||||| | ||| || ||||||||||| ||||| |||| ||| Sbjct 88323 TT-CGATCCTATTGTGTTGGCCTTCGGGATCGTAGTAATGATTAACAGGGACAGTCAGGG 88381 Query 209 GTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCG 268 | | |||| || ||||||||||||| |||||||||||| ||| | ||| |||||| Sbjct 88382 GCATTCATATTTCATAGTCAGAGGTGAAACTCTTGGATTTATGAAAGGCGAACAACTGCG 88441 Query 269 AAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| | || ||||||||||||||||||||||| |||||||| || |||| Sbjct 88442 AAATCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAAATTTGGGGG 88490 Score = 111 bits (122), Expect = 3e-22 Identities = 96/118 (81%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 201 AGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAA 260 ||||||||| | |||| || |||||||||||||||||||||||||| |||| || Sbjct 76249 AGTCGGGGGCATTCTTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGATGAA 76308 Query 261 CTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | ||||| ||||| || |||||||||||||||||||||| | | ||||||| |||| Sbjct 76309 CAACTGCAAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGGATGAAAGTTGGGGG 76365 >seq5 Length=46902585 Score = 197 bits (218), Expect = 3e-48 Identities = 194/245 (79%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| || | |||| | |||||||||||||| Sbjct 32699404 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCATACGCTCTGTATACATTAGCATGGG 32699345 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | || | ||||| |||||| | ||| || | ||||||||| Sbjct 32699344 ATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGCAATGATTAA 32699286 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| || |||||| | ||||| || || ||||||||||||||||||||||| | Sbjct 32699285 TAGGGACAGCCGGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTATGAA 32699226 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 ||| ||| ||||||||||| || | ||| ||||||||||||||||| ||| |||| || Sbjct 32699225 AGATGAACAACTGCGAAAGCATTTATCAAAGATGTTTTCATTAATCA-AGAATGAAATTT 32699167 Query 314 -AGGG 317 |||| Sbjct 32699166 GAGGG 32699162 >seq3 Length=64984695 Score = 187 bits (206), Expect = 5e-45 Identities = 163/200 (82%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178 |||||||||||||| |||| | |||||| | || | ||||| |||||| | ||| Sbjct 24562874 ATACATTAGCATGGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGAT 24562816 Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 || ||||||||||| ||||| ||||||||| | ||||| || |||||||||||||| Sbjct 24562815 CGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAAT 24562756 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 |||||||||||| ||||| ||| ||||||||||| || |||||||||||||||||||| Sbjct 24562755 TCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAAT 24562696 Query 299 CAGTGAACGAAAGTTAGGGG 318 || ||||||||||| |||| Sbjct 24562695 CA-AGAACGAAAGTTGGGGG 24562677 Score = 111 bits (122), Expect = 3e-22 Identities = 127/168 (76%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 || |||| ||||| || | | | ||| | || |||||||||| ||||||||||| || Sbjct 41279783 TGGCCTTAACTGGCTGGGTCATGCCGCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTC 41279724 Query 100 AAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 |||||| |||| |||| | |||||||||||||| |||| | ||||||| | || | || Sbjct 41279723 AAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATAATAGGA-TTTCGATCCT 41279665 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGG 206 ||| |||||| | | | | ||||||||||| ||||| |||||| Sbjct 41279664 ATTGTGTTGGCCTTCGGTATTGGAGTAATGATTAACAGGGACAGTCGG 41279617 >seq77 Length=66831 Score = 132 bits (146), Expect = 9e-29 Identities = 101/118 (86%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 201 AGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAA 260 ||||||||| | ||||| || |||||||||||||||||||||||||| ||||| || Sbjct 6963 AGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAA 7022 Query 261 CTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | ||||||||||| || |||||||||||||||||||||| ||||||||||| |||| Sbjct 7023 CAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 7079 Score = 111 bits (122), Expect = 3e-22 Identities = 127/168 (76%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 || |||| ||||| || | | | ||| | || |||||||||| ||||||||||| || Sbjct 53119 TGGCCTTAACTGGCTGGGTCATGCCGCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTC 53178 Query 100 AAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 |||||| |||| |||| | |||||||||||||| |||| | ||||||| | || | || Sbjct 53179 AAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATAATAGGA-TTTCGATCCT 53237 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGG 206 ||| |||||| | | | | ||||||||||| ||||| |||||| Sbjct 53238 ATTGTGTTGGCCTTCGGTATTGGAGTAATGATTAACAGGGACAGTCGG 53285 Score = 86.0 bits (94), Expect = 1e-14 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 201 AGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAA 260 ||||||||| | |||| |||||||||||||||||||||||||||||| ||||| || Sbjct 64655 AGTCGGGGGCATTCATATTTCATTGTCAGAGGTGAAATTCTTGGATTTATTAAAGACGAA 64596 Query 261 CTACTGCGAAAGCGTTCACCAAGGATG 287 | |||| ||||| || ||| ||||| Sbjct 64595 CAGCTGCTAAAGCATTTGCCAGGGATG 64569 >seq32691 Length=200 Score = 125 bits (138), Expect = 1e-26 Identities = 133/173 (77%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||| ||||| || ||||| |||| |||| | ||||||| |||| Sbjct 172 CTGTTACTTTGAAGAAATTTGAGTGCTCTAAGCAAGCCTACGCTCTGTATACATTTGCAT 113 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | | |||| | || | ||||| |||||| | |||| || |||||||| Sbjct 112 GGGATAACATCAAAGGATTT-CGATCCTATTGTGTTGGCCTTCAGGAACGGAGTAATGAT 54 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 ||| | ||| |||||| || | ||||| || ||||||||||||||||||| Sbjct 53 TAACATGGACAGTCGGAGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTG 1 >seq2 Length=52886895 Score = 122 bits (134), Expect = 2e-25 Identities = 90/104 (87%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| || |||||||||||||||||||||||||| ||||| ||| ||||| ||||| Sbjct 45050805 GTATTACATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCAAAAGCA 45050864 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || |||||||||||||||||||||| ||||||||||| |||| Sbjct 45050865 TTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 45050907 Score = 107 bits (118), Expect = 4e-21 Identities = 107/136 (79%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||| ||| |||||| | |||| |||| | |||||||||||| Sbjct 45074588 CTGTTACTTTGAAGAAATTAGTGTGCTCAAAGGAAGCCTACGCTCTGTATACATTAGCAT 45074647 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | || | ||||| ||||||| | ||| || |||||||| Sbjct 45074648 GGGATAACATCATAGGATTT-CGTTCCTATTGTGTTGGTCTTCGGGATCGGAGTAATGAT 45074706 Query 191 TAATAGGGATAGTCGG 206 ||| ||||| |||||| Sbjct 45074707 TAACAGGGACAGTCGG 45074722 Score = 104 bits (114), Expect = 4e-20 Identities = 105/133 (79%), Gaps = 3/133 (2%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||||| Sbjct 45038383 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGG 45038442 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | ||||| | || | ||||| |||||| | ||| || ||||||||||| Sbjct 45038443 ATAACA-TCTAGGA-TTTCGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 45038500 Query 194 TAGGGATAGTCGG 206 ||||| |||||| Sbjct 45038501 CAGGGACAGTCGG 45038513 >seq824 Length=6319 Score = 111 bits (122), Expect = 3e-22 Identities = 106/133 (80%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||||| Sbjct 707 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGG 648 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||||| |||||| | || | ||| | |||||| | ||| || ||||||||||| Sbjct 647 ATAATATCATAGGA-TTTCGATCCTACTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 589 Query 194 TAGGGATAGTCGG 206 ||||| |||||| Sbjct 588 CAGGGACAGTCGG 576 >seq3375 Length=1005 Score = 98.7 bits (108), Expect = 2e-18 Identities = 73/84 (87%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289 |||||||||| |||||||||| || || ||| |||| ||||||||| ||||||||||| Sbjct 921 AGGTGAAATTTTTGGATTTATGAAAAACGAACAACTGTGAAAGCGTTTGCCAAGGATGTT 980 Query 290 TTCATTAATCAGTGAACGAAAGTT 313 ||||||||||| ||||||||||| Sbjct 981 TTCATTAATCA-AGAACGAAAGTT 1003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914899027328