Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_
202014-05-27] 32,886 sequences; 488,954,160 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq736 470 3e-130
seq57 239 8e-61
seq20 233 4e-59
seq22 230 4e-58
seq10 212 1e-52
seq5 197 3e-48
seq3 187 5e-45
seq77 132 9e-29
seq32691 125 1e-26
seq2 122 2e-25
seq824 111 3e-22
seq3375 98.7 2e-18
>seq736
Length=7293
Score = 470 bits (520), Expect = 3e-130
Identities = 295/317 (93%), Gaps = 1/317 (0%)
Strand=Plus/Plus
Query 2 ACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGG 61
||| | |||||||||||||||||| ||||||| ||||||||||||||||||| |||||||
Sbjct 1485 ACTGGCTCCGGCCGGGCCTTTCCTCCTGGGGAACCGCATGCCCTTCACTGGGCGTGCCGG 1544
Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 121
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1545 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATA 1604
Query 122 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 181
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1605 CATTAGCATGGAATAATAGAATAGGACGCGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 1664
Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241
|||||||||||||||||| ||||||||| || ||||||| | |||||||||||||||||
Sbjct 1665 CGTAATGATTAATAGGGACAGTCGGGGGCATCCGTATTCAGTAGTCAGAGGTGAAATTCT 1724
Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301
||||| || ||||||| ||||||||||||||| || |||||||||||||||||||||||
Sbjct 1725 TGGATCTACTGAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG 1784
Query 302 TGAACGAAAGTTAGGGG 318
||||||||||| ||||
Sbjct 1785 -GAACGAAAGTTGGGGG 1800
>seq57
Length=90757
Score = 239 bits (264), Expect = 8e-61
Identities = 243/310 (78%), Gaps = 9/310 (3%)
Strand=Plus/Plus
Query 16 GGCCTTTC-CTTCTG---GGGATCCGCA--TGCCCTTCACTGGGTGTGCCGGGGAGCCAG 69
||||| || |||||| | ||| |||| || |||| ||||| | | || | || |
Sbjct 89537 GGCCTGTCTCTTCTGTCGGCGATACGCACCTGGCCTTAACTGGCCGGGTCGTGCCTCCGG 89596
Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGC 128
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||
Sbjct 89597 CGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGC 89656
Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188
|||| |||| | |||||| | || | ||||| |||||| | ||| || ||||||
Sbjct 89657 ATGGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATG 89715
Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248
||||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||
Sbjct 89716 ATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTT 89775
Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308
|| ||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||
Sbjct 89776 ATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGA 89834
Query 309 AAGTTAGGGG 318
||||| ||||
Sbjct 89835 AAGTTGGGGG 89844
>seq20
Length=193719
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 65884 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 65943
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 65944 GGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 66002
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 66003 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 66062
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 66063 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 66121
Query 311 GTTAGGGG 318
||| ||||
Sbjct 66122 GTTGGGGG 66129
Score = 233 bits (258), Expect = 4e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 98220 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 98279
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 98280 GGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 98338
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 98339 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 98398
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 98399 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 98457
Query 311 GTTAGGGG 318
||| ||||
Sbjct 98458 GTTGGGGG 98465
Score = 187 bits (206), Expect = 5e-45
Identities = 163/200 (82%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178
|||||||||||||| |||| | |||||| | || | ||||| |||||| | |||
Sbjct 102765 ATACATTAGCATGGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGAT 102823
Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238
|| ||||||||||| ||||| ||||||||| | ||||| || ||||||||||||||
Sbjct 102824 CGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAAT 102883
Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298
|||||||||||| ||||| ||| ||||||||||| || ||||||||||||||||||||
Sbjct 102884 TCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAAT 102943
Query 299 CAGTGAACGAAAGTTAGGGG 318
|| ||||||||||| ||||
Sbjct 102944 CA-AGAACGAAAGTTGGGGG 102962
Score = 149 bits (164), Expect = 1e-33
Identities = 151/193 (78%), Gaps = 3/193 (2%)
Strand=Plus/Plus
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA-CCGCCGTA 185
|||||||||||| ||||||||| | ||||||||||||||||| | || | || |||
Sbjct 124188 GCATGGAATAATGGAATAGGACCTT-GGTTCTATTTTGTTGGTCTTAAGAATCCAAGGTA 124246
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||| ||||| || |||||| | ||||| | ||||||||||||||||||
Sbjct 124247 ATGATTAAGAGGGACAGACGGGGGCATTTGTATTGCGGCGCTAGAGGTGAAATTCTTGGA 124306
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
||||| |||||| |||||||| || ||||| |||||||||||||||| |||
Sbjct 124307 CCGTCGCAAGACAAACTACAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAA 124365
Query 306 CGAAAGTTAGGGG 318
|||||||||| ||
Sbjct 124366 CGAAAGTTAGAGG 124378
>seq22
Length=192287
Score = 230 bits (254), Expect = 4e-58
Identities = 202/248 (81%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| ||| |||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 80002 CTGTTATTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 80061
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 80062 GGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 80120
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 80121 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 80180
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 80181 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 80239
Query 311 GTTAGGGG 318
||| ||||
Sbjct 80240 GTTGGGGG 80247
Score = 230 bits (254), Expect = 4e-58
Identities = 202/248 (81%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCAT 130
|| |||||| ||| ||||||||||| |||||||| |||| ||| | ||||||||||||
Sbjct 151154 CTGTTACTTCGAAGAAATTAGAGTGCTCAAAGCAAGCCTACCCTCTATATACATTAGCAT 151213
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | | ||||||| |||||| | |||| || ||||||||
Sbjct 151214 GGGATAACATCATAGGATTTT-GATTCTATTGTGTTGGCCTTCAGGATCGGAGTAATGAT 151272
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 151273 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 151332
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 151333 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 151391
Query 311 GTTAGGGG 318
||| ||||
Sbjct 151392 GTTGGGGG 151399
Score = 212 bits (234), Expect = 1e-52
Identities = 198/248 (80%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| | | ||||||||||||
Sbjct 118166 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACACCCTTTATACATTAGCAT 118225
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | | | ||||| || ||| | |||| || ||||||||
Sbjct 118226 GGGATAACATCATAGGATTT-CTATCCTATTGTGCTGGCCTTCAGGATCGGAGTAATGAT 118284
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| || |||||||||||| | |||| || ||||||||||||||||||||||||||
Sbjct 118285 TAACAGAGATAGTCGGGGGCATTCATATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 118344
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 118345 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 118403
Query 311 GTTAGGGG 318
||| ||||
Sbjct 118404 GTTGGGGG 118411
Score = 187 bits (206), Expect = 5e-45
Identities = 163/200 (82%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178
|||||||||||||| |||| | |||||| | || | ||||| |||||| | |||
Sbjct 16709 ATACATTAGCATGGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGAT 16767
Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238
|| ||||||||||| ||||| ||||||||| | ||||| || ||||||||||||||
Sbjct 16768 CGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAAT 16827
Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298
|||||||||||| ||||| ||| ||||||||||| || ||||||||||||||||||||
Sbjct 16828 TCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAAT 16887
Query 299 CAGTGAACGAAAGTTAGGGG 318
|| ||||||||||| ||||
Sbjct 16888 CA-AGAACGAAAGTTGGGGG 16906
Score = 86.0 bits (94), Expect = 1e-14
Identities = 85/109 (78%), Gaps = 1/109 (1%)
Strand=Plus/Plus
Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99
|| |||| ||||| | | || | || | |||||||||||||| ||||||||||| ||
Sbjct 37725 TGGCCTTAACTGGCAGGGTCGTGCCTCCGGCACTTTTACTTTGAAGAAATTAGAGTGCTC 37784
Query 100 AAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGA 147
|||||| |||| |||| | |||||||||||| | |||| | ||||||
Sbjct 37785 AAAGCAAGCCTACGCTCTGTATACATTAGCATTGGATAACATCATAGGA 37833
>seq10
Length=550871
Score = 212 bits (234), Expect = 1e-52
Identities = 224/290 (77%), Gaps = 5/290 (2%)
Strand=Plus/Plus
Query 32 GATCCGCA--TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAAT 89
||| |||| || |||| ||||| | | || | || | || |||||||||| ||||
Sbjct 88203 GATACGCACCTGGCCTTAACTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAAT 88262
Query 90 TAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGAC 148
||||||| |||||||| |||| |||| | |||||||||||||| |||| | ||||||
Sbjct 88263 TAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATCATAGGAT 88322
Query 149 GTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGG 208
| || | ||||| |||||| | ||| || ||||||||||| ||||| |||| |||
Sbjct 88323 TT-CGATCCTATTGTGTTGGCCTTCGGGATCGTAGTAATGATTAACAGGGACAGTCAGGG 88381
Query 209 GTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCG 268
| | |||| || ||||||||||||| |||||||||||| ||| | ||| ||||||
Sbjct 88382 GCATTCATATTTCATAGTCAGAGGTGAAACTCTTGGATTTATGAAAGGCGAACAACTGCG 88441
Query 269 AAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
||| | || ||||||||||||||||||||||| |||||||| || ||||
Sbjct 88442 AAATCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAAATTTGGGGG 88490
Score = 111 bits (122), Expect = 3e-22
Identities = 96/118 (81%), Gaps = 1/118 (1%)
Strand=Plus/Plus
Query 201 AGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAA 260
||||||||| | |||| || |||||||||||||||||||||||||| |||| ||
Sbjct 76249 AGTCGGGGGCATTCTTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGATGAA 76308
Query 261 CTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
| ||||| ||||| || |||||||||||||||||||||| | | ||||||| ||||
Sbjct 76309 CAACTGCAAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGGATGAAAGTTGGGGG 76365
>seq5
Length=46902585
Score = 197 bits (218), Expect = 3e-48
Identities = 194/245 (79%), Gaps = 4/245 (2%)
Strand=Plus/Minus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133
|||||||||| ||||||||||| |||||||| || | |||| | ||||||||||||||
Sbjct 32699404 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCATACGCTCTGTATACATTAGCATGGG 32699345
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||| | |||||| | || | ||||| |||||| | ||| || | |||||||||
Sbjct 32699344 ATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGAGCAATGATTAA 32699286
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
|||||| || |||||| | ||||| || || ||||||||||||||||||||||| |
Sbjct 32699285 TAGGGACAGCCGGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTATGAA 32699226
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
||| ||| ||||||||||| || | ||| ||||||||||||||||| ||| |||| ||
Sbjct 32699225 AGATGAACAACTGCGAAAGCATTTATCAAAGATGTTTTCATTAATCA-AGAATGAAATTT 32699167
Query 314 -AGGG 317
||||
Sbjct 32699166 GAGGG 32699162
>seq3
Length=64984695
Score = 187 bits (206), Expect = 5e-45
Identities = 163/200 (82%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178
|||||||||||||| |||| | |||||| | || | ||||| |||||| | |||
Sbjct 24562874 ATACATTAGCATGGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGAT 24562816
Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238
|| ||||||||||| ||||| ||||||||| | ||||| || ||||||||||||||
Sbjct 24562815 CGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAAT 24562756
Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298
|||||||||||| ||||| ||| ||||||||||| || ||||||||||||||||||||
Sbjct 24562755 TCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAAT 24562696
Query 299 CAGTGAACGAAAGTTAGGGG 318
|| ||||||||||| ||||
Sbjct 24562695 CA-AGAACGAAAGTTGGGGG 24562677
Score = 111 bits (122), Expect = 3e-22
Identities = 127/168 (76%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99
|| |||| ||||| || | | | ||| | || |||||||||| ||||||||||| ||
Sbjct 41279783 TGGCCTTAACTGGCTGGGTCATGCCGCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTC 41279724
Query 100 AAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158
|||||| |||| |||| | |||||||||||||| |||| | ||||||| | || | ||
Sbjct 41279723 AAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATAATAGGA-TTTCGATCCT 41279665
Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGG 206
||| |||||| | | | | ||||||||||| ||||| ||||||
Sbjct 41279664 ATTGTGTTGGCCTTCGGTATTGGAGTAATGATTAACAGGGACAGTCGG 41279617
>seq77
Length=66831
Score = 132 bits (146), Expect = 9e-29
Identities = 101/118 (86%), Gaps = 1/118 (1%)
Strand=Plus/Plus
Query 201 AGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAA 260
||||||||| | ||||| || |||||||||||||||||||||||||| ||||| ||
Sbjct 6963 AGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAA 7022
Query 261 CTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
| ||||||||||| || |||||||||||||||||||||| ||||||||||| ||||
Sbjct 7023 CAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 7079
Score = 111 bits (122), Expect = 3e-22
Identities = 127/168 (76%), Gaps = 2/168 (1%)
Strand=Plus/Plus
Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99
|| |||| ||||| || | | | ||| | || |||||||||| ||||||||||| ||
Sbjct 53119 TGGCCTTAACTGGCTGGGTCATGCCGCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTC 53178
Query 100 AAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158
|||||| |||| |||| | |||||||||||||| |||| | ||||||| | || | ||
Sbjct 53179 AAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATAATAGGA-TTTCGATCCT 53237
Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGG 206
||| |||||| | | | | ||||||||||| ||||| ||||||
Sbjct 53238 ATTGTGTTGGCCTTCGGTATTGGAGTAATGATTAACAGGGACAGTCGG 53285
Score = 86.0 bits (94), Expect = 1e-14
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 201 AGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAA 260
||||||||| | |||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 64655 AGTCGGGGGCATTCATATTTCATTGTCAGAGGTGAAATTCTTGGATTTATTAAAGACGAA 64596
Query 261 CTACTGCGAAAGCGTTCACCAAGGATG 287
| |||| ||||| || ||| |||||
Sbjct 64595 CAGCTGCTAAAGCATTTGCCAGGGATG 64569
>seq32691
Length=200
Score = 125 bits (138), Expect = 1e-26
Identities = 133/173 (77%), Gaps = 2/173 (1%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||| ||||| || ||||| |||| |||| | ||||||| ||||
Sbjct 172 CTGTTACTTTGAAGAAATTTGAGTGCTCTAAGCAAGCCTACGCTCTGTATACATTTGCAT 113
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | | |||| | || | ||||| |||||| | |||| || ||||||||
Sbjct 112 GGGATAACATCAAAGGATTT-CGATCCTATTGTGTTGGCCTTCAGGAACGGAGTAATGAT 54
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
||| | ||| |||||| || | ||||| || |||||||||||||||||||
Sbjct 53 TAACATGGACAGTCGGAGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTG 1
>seq2
Length=52886895
Score = 122 bits (134), Expect = 2e-25
Identities = 90/104 (87%), Gaps = 1/104 (1%)
Strand=Plus/Plus
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| || |||||||||||||||||||||||||| ||||| ||| ||||| |||||
Sbjct 45050805 GTATTACATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCAAAAGCA 45050864
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|| |||||||||||||||||||||| ||||||||||| ||||
Sbjct 45050865 TTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 45050907
Score = 107 bits (118), Expect = 4e-21
Identities = 107/136 (79%), Gaps = 2/136 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||| ||| |||||| | |||| |||| | ||||||||||||
Sbjct 45074588 CTGTTACTTTGAAGAAATTAGTGTGCTCAAAGGAAGCCTACGCTCTGTATACATTAGCAT 45074647
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| ||||||| | ||| || ||||||||
Sbjct 45074648 GGGATAACATCATAGGATTT-CGTTCCTATTGTGTTGGTCTTCGGGATCGGAGTAATGAT 45074706
Query 191 TAATAGGGATAGTCGG 206
||| ||||| ||||||
Sbjct 45074707 TAACAGGGACAGTCGG 45074722
Score = 104 bits (114), Expect = 4e-20
Identities = 105/133 (79%), Gaps = 3/133 (2%)
Strand=Plus/Plus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133
|||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||||
Sbjct 45038383 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGG 45038442
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||| | ||||| | || | ||||| |||||| | ||| || |||||||||||
Sbjct 45038443 ATAACA-TCTAGGA-TTTCGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 45038500
Query 194 TAGGGATAGTCGG 206
||||| ||||||
Sbjct 45038501 CAGGGACAGTCGG 45038513
>seq824
Length=6319
Score = 111 bits (122), Expect = 3e-22
Identities = 106/133 (80%), Gaps = 2/133 (2%)
Strand=Plus/Minus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133
|||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||||
Sbjct 707 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGG 648
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||||| |||||| | || | ||| | |||||| | ||| || |||||||||||
Sbjct 647 ATAATATCATAGGA-TTTCGATCCTACTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 589
Query 194 TAGGGATAGTCGG 206
||||| ||||||
Sbjct 588 CAGGGACAGTCGG 576
>seq3375
Length=1005
Score = 98.7 bits (108), Expect = 2e-18
Identities = 73/84 (87%), Gaps = 1/84 (1%)
Strand=Plus/Plus
Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289
|||||||||| |||||||||| || || ||| |||| ||||||||| |||||||||||
Sbjct 921 AGGTGAAATTTTTGGATTTATGAAAAACGAACAACTGTGAAAGCGTTTGCCAAGGATGTT 980
Query 290 TTCATTAATCAGTGAACGAAAGTT 313
||||||||||| |||||||||||
Sbjct 981 TTCATTAATCA-AGAACGAAAGTT 1003
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914899027328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |